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PDB: 45955 results

4QPN
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BU of 4qpn by Molmil
Crystal Structure of Human Methyltransferase-Like Protein 21B
Descriptor: Protein-lysine methyltransferase METTL21B, S-ADENOSYL-L-HOMOCYSTEINE, SULFATE ION, ...
Authors:Tempel, W, Hong, B.S, Seitova, A, He, H, Li, Y, Graslund, S, Arrowsmith, C.H, Edwards, A.M, Brown, P.J, Structural Genomics Consortium (SGC)
Deposit date:2014-06-24
Release date:2014-07-09
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Crystal Structure of Human Methyltransferase-Like Protein 21B
TO BE PUBLISHED
4IRF
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BU of 4irf by Molmil
Preliminary structural investigations of a malarial protein secretion system
Descriptor: MALARIAL CLPB2 ATPASE/HSP101 PROTEIN
Authors:Egea, P.F.
Deposit date:2013-01-14
Release date:2014-04-16
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structural mapping of the ClpB ATPases of Plasmodium falciparum: Targeting protein folding and secretion for antimalarial drug design.
Protein Sci., 24, 2015
8TS2
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BU of 8ts2 by Molmil
Cryo-EM structure of human MRS2 with EDTA
Descriptor: Magnesium transporter MRS2 homolog, mitochondrial, Soluble cytochrome b562 fusion protein
Authors:He, Z, Mount, J.W, Zhang, J, Yuan, P.
Deposit date:2023-08-10
Release date:2024-08-14
Method:ELECTRON MICROSCOPY (2.95 Å)
Cite:Human mitochondrial MRS2 is a Ca2+-regulated nonselective cation channel
To Be Published
8TNJ
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BU of 8tnj by Molmil
Cryo-EM structure of HLA-B*73:01 bound to a 9mer peptide and two Fabs
Descriptor: 9mer peptide,Beta-2-microglobulin,MHC class I antigen chimera, B.1 Fab heavy chain, B.1 Fab light chain, ...
Authors:Ross, P, Adams, E.J, Lodwick, J, Zhao, M, Slezak, T, Kossiakoff, A.
Deposit date:2023-08-02
Release date:2024-08-14
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Cryo-EM structure of HLA-B*73:01 bound to a 9mer peptide and two Fabs
To Be Published
8TK3
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BU of 8tk3 by Molmil
HUMAN VH1-RELATED DUAL-SPECIFICITY PHOSPHATASE (VHR) having oxidized catalytic cysteine and complexed with 6-(difluoromethyl)pyrimidin-4-ol at two allosteric sites
Descriptor: 6-(difluoromethyl)pyrimidin-4-ol, DIMETHYL SULFOXIDE, Dual specificity protein phosphatase 3
Authors:Aleshin, A.E, Wu, J, Lambert, L.J, Cosford, N.D.P, Tautz, L.
Deposit date:2023-07-25
Release date:2024-08-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:HUMAN VH1-RELATED DUAL-SPECIFICITY PHOSPHATASE (VHR) having oxidized catalytic cysteine and complexed with 6-(difluoromethyl)pyrimidin-4-ol at two allosteric sites
To Be Published
3HMF
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BU of 3hmf by Molmil
Crystal Structure of the second Bromodomain of Human Poly-bromodomain containing protein 1 (PB1)
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Protein polybromo-1, ...
Authors:Filippakopoulos, P, Picaud, S, Keates, T, Muniz, J, von Delft, F, Arrowsmith, C.H, Edwards, A, Weigelt, J, Bountra, C, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2009-05-29
Release date:2009-06-23
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Histone recognition and large-scale structural analysis of the human bromodomain family.
Cell(Cambridge,Mass.), 149, 2012
8TS3
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BU of 8ts3 by Molmil
Cryo-EM structure of human MRS2 with Ca2+
Descriptor: CALCIUM ION, Magnesium transporter MRS2 homolog, mitochondrial, ...
Authors:He, Z, Mount, J.W, Zhang, J, Yuan, P.
Deposit date:2023-08-10
Release date:2024-08-14
Method:ELECTRON MICROSCOPY (3.11 Å)
Cite:Human mitochondrial MRS2 is a Ca2+-regulated nonselective cation channel
To Be Published
6VLL
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BU of 6vll by Molmil
The crystal structure of the 2009/H1N1/California PA endonuclease mutant I38T in complex with SJ000986213
Descriptor: MANGANESE (II) ION, Polymerase acidic protein, SULFATE ION, ...
Authors:Cuypers, M.G, Slavish, P.J, Rankovic, Z, White, S.W.
Deposit date:2020-01-24
Release date:2021-02-24
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.87 Å)
Cite:The crystal structure of the 2009 H1N1 PA endonuclease mutant I38T in complex with SJ000986213
To Be Published
3D2W
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BU of 3d2w by Molmil
Crystal structure of mouse TDP-43 RRM2 domain in complex with DNA
Descriptor: DNA (5'-D(*DGP*DTP*DTP*DGP*DAP*DGP*DCP*DGP*DTP*DT)-3'), PHOSPHATE ION, TAR DNA-binding protein 43
Authors:Kuo, P.H, Yuan, H.S.
Deposit date:2008-05-09
Release date:2009-04-07
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structural insights into TDP-43 in nucleic-acid binding and domain interactions
Nucleic Acids Res., 37, 2009
8DW2
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BU of 8dw2 by Molmil
Cryo-EM structure of SARS-CoV-2 RBD in complex with anti-SARS-CoV-2 DARPin,SR22, and two antibody Fabs, S309 and CR3022
Descriptor: Antibody CR3022 heavy chain, Antibody CR3022 light chain, Antibody S309 heavy chain, ...
Authors:Kwon, Y.D, Gorman, J, Kwong, P.D.
Deposit date:2022-07-30
Release date:2022-12-07
Last modified:2023-03-15
Method:ELECTRON MICROSCOPY (4.11 Å)
Cite:A potent and broad neutralization of SARS-CoV-2 variants of concern by DARPins.
Nat.Chem.Biol., 19, 2023
8TON
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BU of 8ton by Molmil
Crystal Structure of Engineered Mouse Protocadherin-15 EC3-EC7 Connection
Descriptor: CALCIUM ION, POTASSIUM ION, Protocadherin-15 EC3-EC7, ...
Authors:De-la-Torre, P, Brower, J, Indzhykulian, A.
Deposit date:2023-08-03
Release date:2024-08-14
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Crystal Structure of Engineered Mouse Protocadherin-15 EC3-EC7 Connection
To Be Published
8TK5
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BU of 8tk5 by Molmil
HUMAN VH1-RELATED DUAL-SPECIFICITY PHOSPHATASE (VHR) complexed with HEPES
Descriptor: 3,6,9,12,15,18,21-HEPTAOXATRICOSANE-1,23-DIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, DI(HYDROXYETHYL)ETHER, ...
Authors:Aleshin, A.E, Wu, J, Lambert, L.J, Cosford, N.D.P, Tautz, L.
Deposit date:2023-07-25
Release date:2024-08-14
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Fragment Screening Platform and Discovery of Novel Fragment Binders of the VHR Phosphatase, a Drug Target for Sepsis and Septic Shock
To Be Published
6G73
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BU of 6g73 by Molmil
The dynamic nature of the VDAC1 channels in bilayers: human VDAC1 at 3.3 Angstrom resolution
Descriptor: 1,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLINE, Voltage-dependent anion-selective channel protein 1
Authors:Razeto, A, Gribbon, P, Loew, C.
Deposit date:2018-04-04
Release date:2019-04-24
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.27 Å)
Cite:The dynamic nature of the VDAC1 channels in bilayers as revealed by two crystal structures of the human isoform in bicelles at 2.7 and 3.3 Angstrom resolution: implications for VDAC1 voltage-dependent mechanism and for its oligomerization
To Be Published
4L5K
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BU of 4l5k by Molmil
Crystal structure of the complex of DNA hexamer d(CGATCG) with Coptisine
Descriptor: 6,7-dihydro[1,3]dioxolo[4,5-g][1,3]dioxolo[7,8]isoquino[3,2-a]isoquinolin-5-ium, DNA (5'-D(*CP*GP*AP*TP*CP*G)-3')
Authors:Ferraroni, M, Bazzicalupi, C, Gratteri, P.
Deposit date:2013-06-11
Release date:2014-07-02
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.71 Å)
Cite:Crystal structure of the complex of DNA hexamer d(CGATCG) with Coptisine
to be published
3D5Q
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BU of 3d5q by Molmil
Crystal Structure of 11b-HSD1 in Complex with Triazole Inhibitor
Descriptor: 3-[1-(4-fluorophenyl)cyclopropyl]-4-(1-methylethyl)-5-[4-(trifluoromethoxy)phenyl]-4H-1,2,4-triazole, Corticosteroid 11-beta-dehydrogenase isozyme 1, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Wang, Z, Liu, J, Sudom, A, Walker, N.P.C.
Deposit date:2008-05-16
Release date:2008-10-07
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Distinctive molecular inhibition mechanisms for selective inhibitors of human 11beta-hydroxysteroid dehydrogenase type 1.
Bioorg.Med.Chem., 16, 2008
8TK6
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BU of 8tk6 by Molmil
HUMAN VH1-RELATED DUAL-SPECIFICITY PHOSPHATASE (VHR) in apo form
Descriptor: Dual specificity protein phosphatase 3
Authors:Aleshin, A.E, Wu, J, Lambert, L.J, Cosford, N.D.P, Tautz, L.
Deposit date:2023-07-25
Release date:2024-08-14
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Fragment Screening Platform and Discovery of Novel Fragment Binders of the VHR Phosphatase, a Drug Target for Sepsis and Septic Shock
To Be Published
4PCU
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BU of 4pcu by Molmil
Crystal structure of delta516-525 E201S human cystathionine beta-synthase with AdoMet
Descriptor: Cystathionine beta-synthase, PROTOPORPHYRIN IX CONTAINING FE, PYRIDOXAL-5'-PHOSPHATE, ...
Authors:Ereno-Orbea, J, Majtan, T, Oyenarte, I, Kraus, J.P, Martinez-Cruz, L.A.
Deposit date:2014-04-16
Release date:2014-09-24
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (3.578 Å)
Cite:Structural insight into the molecular mechanism of allosteric activation of human cystathionine beta-synthase by S-adenosylmethionine.
Proc.Natl.Acad.Sci.USA, 111, 2014
8TS1
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BU of 8ts1 by Molmil
Cryo-EM structure of human MRS2 with Mg2+
Descriptor: MAGNESIUM ION, Magnesium transporter MRS2 homolog, mitochondrial, ...
Authors:He, Z, Mount, J.W, Zhang, J, Yuan, P.
Deposit date:2023-08-10
Release date:2024-08-14
Method:ELECTRON MICROSCOPY (2.92 Å)
Cite:Human mitochondrial MRS2 is a Ca2+-regulated nonselective cation channel
To Be Published
5FCT
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BU of 5fct by Molmil
Mouse thymidylate synthase in ternary complex with FdUMP and methylenetetrahydrofolate.
Descriptor: 5-FLUORO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE, 5-METHYL-5,6,7,8-TETRAHYDROFOLIC ACID, Thymidylate synthase
Authors:Dowiercial, A, Wilk, P, Jarmula, A, Rode, W.
Deposit date:2015-12-15
Release date:2016-10-26
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Mouse thymidylate synthase does not show the inactive conformation, observed for the human enzyme
Struct Chem, 2016
7UYL
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BU of 7uyl by Molmil
850 Fab
Descriptor: 850 Fab Heavy Chain, 850 Fab Light Chain, GLYCEROL, ...
Authors:Kucharska, I, Prieto, K, Julien, J.P.
Deposit date:2022-05-06
Release date:2022-11-23
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:High-density binding to Plasmodium falciparum circumsporozoite protein repeats by inhibitory antibody elicited in mouse with human immunoglobulin repertoire.
Plos Pathog., 18, 2022
6W5L
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BU of 6w5l by Molmil
2.1 A resolution structure of Norovirus 3CL protease in complex with inhibitor 7g
Descriptor: (2~{S})-~{N}-[(1~{R})-1-[bis($l^{1}-oxidanyl)-methoxy-$l^{5}-sulfanyl]-1-oxidanyl-3-[(3~{R})-2-oxidanylidenepyrrolidin-3-yl]propan-2-yl]-2-[[[2-(3-chlorophenyl)-2-methyl-propoxy]-oxidanylidene-methyl]amino]-4-methyl-pentanamide, 3C-LIKE PROTEASE
Authors:Lovell, S, Kashipathy, M.M, Battaile, K.P, Rathnayake, A.D, Kim, Y, Chang, K.O, Groutas, W.C.
Deposit date:2020-03-13
Release date:2020-09-30
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure-Guided Optimization of Dipeptidyl Inhibitors of Norovirus 3CL Protease.
J.Med.Chem., 63, 2020
6ATN
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BU of 6atn by Molmil
Exploring Cystine Dense Peptide Space to Open a Unique Molecular Toolbox
Descriptor: Potassium channel toxin alpha-KTx 4.5
Authors:Gewe, M.M, Rupert, P, Strong, R.K.
Deposit date:2017-08-29
Release date:2018-02-28
Last modified:2018-03-14
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Screening, large-scale production and structure-based classification of cystine-dense peptides.
Nat. Struct. Mol. Biol., 25, 2018
4J4H
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BU of 4j4h by Molmil
PylD in complex with pyrroline-carboxy-lysine and NADH
Descriptor: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, MAGNESIUM ION, N~6~-[(2R)-3,4-dihydro-2H-pyrrol-2-ylcarbonyl]-L-lysine, ...
Authors:Quitterer, F, Beck, P, Bacher, A, Groll, M.
Deposit date:2013-02-06
Release date:2013-06-12
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure and Reaction Mechanism of Pyrrolysine Synthase (PylD).
Angew.Chem.Int.Ed.Engl., 52, 2013
8DW3
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BU of 8dw3 by Molmil
Cryo-EM structure of SARS-CoV-2 RBD in complex with anti-SARS-CoV-2 DARPin,SR16m, and two antibody Fabs, S309 and CR3022
Descriptor: Anti-SARS-CoV-2 DARPin SR16m, Antibody S309 light chain, Spike protein S1, ...
Authors:Kwon, Y.D, Gorman, J, Kwong, P.D.
Deposit date:2022-07-30
Release date:2022-12-07
Last modified:2023-03-15
Method:ELECTRON MICROSCOPY (4.26 Å)
Cite:A potent and broad neutralization of SARS-CoV-2 variants of concern by DARPins.
Nat.Chem.Biol., 19, 2023
6AVD
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BU of 6avd by Molmil
Exploring Cystine Dense Peptide Space to Open a Unique Molecular Toolbox
Descriptor: Potassium channel toxin alpha-KTx 6.9, SULFATE ION
Authors:Gewe, M.M, Rupert, P, Strong, R.K.
Deposit date:2017-09-01
Release date:2018-02-28
Last modified:2018-03-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Screening, large-scale production and structure-based classification of cystine-dense peptides.
Nat. Struct. Mol. Biol., 25, 2018

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