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PDB: 101 results

8Q66
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BU of 8q66 by Molmil
Crystal Structure of the C. elegans MUT-7 MUT-8 CTD complex
Descriptor: 1,2-ETHANEDIOL, Exonuclease mut-7, SH2 domain-containing protein, ...
Authors:Falk, S, Busetto, V.
Deposit date:2023-08-11
Release date:2024-03-06
Last modified:2024-09-18
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:MUT-7 exoribonuclease activity and localization are mediated by an ancient domain.
Nucleic Acids Res., 52, 2024
5OOQ
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BU of 5ooq by Molmil
Structure of the Mtr4 Nop53 Complex
Descriptor: ATP-dependent RNA helicase DOB1, Ribosome biogenesis protein NOP53, SULFATE ION
Authors:Falk, S, Basquin, J, Conti, E.
Deposit date:2017-08-08
Release date:2017-09-20
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structural insights into the interaction of the nuclear exosome helicase Mtr4 with the preribosomal protein Nop53.
RNA, 23, 2017
4U4C
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BU of 4u4c by Molmil
The molecular architecture of the TRAMP complex reveals the organization and interplay of its two catalytic activities
Descriptor: 1,2-ETHANEDIOL, ATP-dependent RNA helicase DOB1, CHLORIDE ION, ...
Authors:Falk, S, Weir, J.R, Hentschel, J, Reichelt, P, Bonneau, F, Conti, E.
Deposit date:2014-07-23
Release date:2014-09-24
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The Molecular Architecture of the TRAMP Complex Reveals the Organization and Interplay of Its Two Catalytic Activities.
Mol.Cell, 55, 2014
5LXR
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BU of 5lxr by Molmil
Structure of the minimal RBM7 - ZCCHC8 Complex
Descriptor: BROMIDE ION, CHLORIDE ION, RNA-binding protein 7, ...
Authors:Falk, S, Finogenova, K, Benda, C, Conti, E.
Deposit date:2016-09-22
Release date:2016-12-14
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of the RBM7-ZCCHC8 core of the NEXT complex reveals connections to splicing factors.
Nat Commun, 7, 2016
5LXY
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BU of 5lxy by Molmil
Structure of the minimal RBM7 - ZCCHC8 Complex
Descriptor: BROMIDE ION, RNA-binding protein 7, Zinc finger CCHC domain-containing protein 8
Authors:Falk, S, Finogenova, K, Benda, C, Conti, E.
Deposit date:2016-09-23
Release date:2016-12-14
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Structure of the RBM7-ZCCHC8 core of the NEXT complex reveals connections to splicing factors.
Nat Commun, 7, 2016
7O6N
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BU of 7o6n by Molmil
Crystal structure of C. elegans ERH-2 PID-3 complex
Descriptor: Enhancer of rudimentary homolog 2, FORMIC ACID, Protein pid-3
Authors:Falk, S, Ketting, R.F.
Deposit date:2021-04-11
Release date:2021-08-25
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.17 Å)
Cite:Structural basis of PETISCO complex assembly during piRNA biogenesis in C. elegans .
Genes Dev., 35, 2021
7O6L
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BU of 7o6l by Molmil
Crystal structure of C. elegans ERH-2
Descriptor: Enhancer of rudimentary homolog 2
Authors:Falk, S, Ketting, R.F.
Deposit date:2021-04-11
Release date:2021-08-25
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural basis of PETISCO complex assembly during piRNA biogenesis in C. elegans .
Genes Dev., 35, 2021
5OKZ
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BU of 5okz by Molmil
Crystal Strucrure of the Mpp6 Exosome complex
Descriptor: CHLORIDE ION, Exosome complex component CSL4, Exosome complex component MTR3, ...
Authors:Falk, S, Ebert, J, Conti, E.
Deposit date:2017-07-26
Release date:2017-08-30
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.200039 Å)
Cite:Mpp6 Incorporation in the Nuclear Exosome Contributes to RNA Channeling through the Mtr4 Helicase.
Cell Rep, 20, 2017
6HMZ
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BU of 6hmz by Molmil
Crystal Structure of a Single-Domain Cyclophilin from Brassica napus Phloem Sap
Descriptor: Cyclosporin, MAGNESIUM ION, MALONATE ION, ...
Authors:Falke, S, Hanhart, P, Garbe, M, Thiess, M, Betzel, C, Kehr, J.
Deposit date:2018-09-13
Release date:2018-11-21
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Enzyme activity and structural features of three single-domain phloem cyclophilins from Brassica napus.
Sci Rep, 9, 2019
6TR1
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BU of 6tr1 by Molmil
Native cytochrome c6 from Thermosynechococcus elongatus in space group H3
Descriptor: Cytochrome c6, HEME C, SODIUM ION
Authors:Falke, S, Feiler, C.G, Sarrou, I.
Deposit date:2019-12-17
Release date:2019-12-25
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structures of native cytochrome c6from Thermosynechococcus elongatus in two different space groups and implications for its oligomerization.
Acta Crystallogr.,Sect.F, 76, 2020
9G35
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BU of 9g35 by Molmil
The HIV protease inhibitor lopinavir binding to the active site of Cryphonectria parasitica endothiapepsin
Descriptor: 1,2-ETHANEDIOL, Endothiapepsin, N-{1-BENZYL-4-[2-(2,6-DIMETHYL-PHENOXY)-ACETYLAMINO]-3-HYDROXY-5-PHENYL-PENTYL}-3-METHYL-2-(2-OXO-TETRAHYDRO-PYRIMIDIN-1-YL)-BUTYRAMIDE, ...
Authors:Falke, S, Senst, J.M, Guenther, S, Meents, A.
Deposit date:2024-07-11
Release date:2024-07-24
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:The HIV protease inhibitor lopinavir binding to the active site of Cryphonectria parasitica endothiapepsin
To Be Published
9FVO
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BU of 9fvo by Molmil
The HIV protease inhibitor amprenavir binding to the active site of Cryphonectria parasitica endothiapepsin
Descriptor: 1,2-ETHANEDIOL, ACETIC ACID, Endothiapepsin, ...
Authors:Falke, S, Senst, J.M, Guenther, S, Meents, A.
Deposit date:2024-06-27
Release date:2024-07-10
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The HIV protease inhibitor amprenavir binding to the active site of Cryphonectria parasitica endothiapepsin
To Be Published
9G34
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BU of 9g34 by Molmil
The HIV protease inhibitor darunavir binding to the active site of Cryphonectria parasitica endothiapepsin
Descriptor: (3R,3AS,6AR)-HEXAHYDROFURO[2,3-B]FURAN-3-YL(1S,2R)-3-[[(4-AMINOPHENYL)SULFONYL](ISOBUTYL)AMINO]-1-BENZYL-2-HYDROXYPROPYLCARBAMATE, 1,2-ETHANEDIOL, DIMETHYL SULFOXIDE, ...
Authors:Falke, S, Senst, J.M, Guenther, S, Meents, A.
Deposit date:2024-07-11
Release date:2024-07-24
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:The HIV protease inhibitor darunavir binding to the active site of Cryphonectria parasitica endothiapepsin
To Be Published
8OZA
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BU of 8oza by Molmil
Human cathepsin L in complex with covalently bound CA-074 methyl ester
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, Cathepsin L, ...
Authors:Falke, S, Lieske, J, Guenther, S, Ewert, W, Reinke, P.Y.A, Loboda, J, Karnicar, K, Usenik, A, Lindic, N, Sekirnik, A, Chapman, H.N, Hinrichs, W, Turk, D, Meents, A.
Deposit date:2023-05-08
Release date:2023-07-05
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural Elucidation and Antiviral Activity of Covalent Cathepsin L Inhibitors.
J.Med.Chem., 67, 2024
8QKB
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BU of 8qkb by Molmil
Crystal structure of human cathepsin L in complex with the vinyl sulfone inhibitor K777
Descriptor: 1,2-ETHANEDIOL, Cathepsin L, DI(HYDROXYETHYL)ETHER, ...
Authors:Falke, S, Lieske, J, Guenther, S, Reinke, P.Y.A, Ewert, W, Loboda, J, Karnicar, K, Usenik, A, Lindic, N, Sekirnik, A, Chapman, H.N, Hinrichs, W, Turk, D, Meents, A.
Deposit date:2023-09-14
Release date:2023-09-27
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural Elucidation and Antiviral Activity of Covalent Cathepsin L Inhibitors.
J.Med.Chem., 67, 2024
8B4F
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BU of 8b4f by Molmil
Crystal structure of human cathepsin L forming a thiohemiacetal with N-Boc-2-aminoacetaldehyde
Descriptor: 1,2-ETHANEDIOL, Cathepsin L, DI(HYDROXYETHYL)ETHER, ...
Authors:Falke, S, Lieske, J, Guenther, S, Reinke, P.Y.A, Ewert, W, Loboda, J, Karnicar, K, Usenik, A, Lindic, N, Sekirnik, A, Chapman, H.N, Hinrichs, W, Turk, D, Meents, A.
Deposit date:2022-09-20
Release date:2023-09-27
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural Elucidation and Antiviral Activity of Covalent Cathepsin L Inhibitors.
J.Med.Chem., 67, 2024
8C77
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BU of 8c77 by Molmil
Human cathepsin L after reaction with the thiocarbazate inhibitor CID 16725315
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, Cathepsin L, ...
Authors:Falke, S, Lieske, J, Guenther, S, Reinke, P.Y.A, Ewert, W, Loboda, J, Karnicar, K, Usenik, A, Lindic, N, Sekirnik, A, Chapman, H.N, Hinrichs, W, Turk, D, Meents, A.
Deposit date:2023-01-12
Release date:2023-01-25
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural Elucidation and Antiviral Activity of Covalent Cathepsin L Inhibitors.
J.Med.Chem., 67, 2024
8OFA
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BU of 8ofa by Molmil
Crystal structure of human cathepsin L interacting with tosyl phenylalanyl chloromethyl ketone (TPCK)
Descriptor: 1,2-ETHANEDIOL, 1-METHOXY-2-[2-(2-METHOXY-ETHOXY]-ETHANE, 4-methyl-~{N}-[(2~{S})-4-oxidanyl-3-oxidanylidene-1-phenyl-butan-2-yl]benzenesulfonamide, ...
Authors:Falke, S, Lieske, J, Guenther, S, Ewert, W, Reinke, P.Y.A, Loboda, J, Karnicar, K, Usenik, A, Lindic, N, Sekirnik, A, Chapman, H.N, Hinrichs, W, Turk, D, Meents, A.
Deposit date:2023-03-14
Release date:2023-11-29
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural Elucidation and Antiviral Activity of Covalent Cathepsin L Inhibitors.
J.Med.Chem., 67, 2024
9GJ2
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BU of 9gj2 by Molmil
Crystal structure of human cathepsin S produced in insect cells in complex with ketoamide 13b
Descriptor: 1,2-ETHANEDIOL, CITRIC ACID, Cathepsin S, ...
Authors:Falke, S, Karnicar, K, Usenik, A, Lindic, N, Sekirnik, A, Reinke, P.Y.A, Guenther, S, Turk, D, Meents, A.
Deposit date:2024-08-20
Release date:2024-09-04
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Crystal structure of human cathepsin S produced in insect cells in complex with ketoamide 13b
To Be Published
8AHV
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BU of 8ahv by Molmil
Crystal structure of human cathepsin L in complex with calpain inhibitor XII
Descriptor: (phenylmethyl) ~{N}-[(2~{S})-4-methyl-1-oxidanylidene-1-[[(2~{S},3~{S})-2-oxidanyl-1-oxidanylidene-1-(pyridin-2-ylmethylamino)hexan-3-yl]amino]pentan-2-yl]carbamate, 1,2-ETHANEDIOL, Cathepsin L, ...
Authors:Falke, S, Lieske, J, Guenther, S, Reinke, P.Y.A, Ewert, W, Loboda, J, Karnicar, K, Usenik, A, Lindic, N, Sekirnik, A, Chapman, H.N, Hinrichs, W, Turk, D, Meents, A.
Deposit date:2022-07-22
Release date:2023-08-02
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural Elucidation and Antiviral Activity of Covalent Cathepsin L Inhibitors.
J.Med.Chem., 67, 2024
8PRX
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BU of 8prx by Molmil
Crystal structure of human cathepsin L after reaction with the bound ketoamide inhibitor 13b
Descriptor: 1,2-ETHANEDIOL, Cathepsin L, DI(HYDROXYETHYL)ETHER, ...
Authors:Falke, S, Lieske, J, Guenther, S, Reinke, P.Y.A, Ewert, W, Loboda, J, Karnicar, K, Usenik, A, Lindic, N, Sekirnik, A, Chapman, H.N, Hinrichs, W, Turk, D, Meents, A.
Deposit date:2023-07-12
Release date:2023-08-23
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural Elucidation and Antiviral Activity of Covalent Cathepsin L Inhibitors.
J.Med.Chem., 67, 2024
7ZXA
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BU of 7zxa by Molmil
Crystal structure of human cathepsin L with covalently bound aloxistatin (E-64D)
Descriptor: 1,2-ETHANEDIOL, Cathepsin L, DI(HYDROXYETHYL)ETHER, ...
Authors:Falke, S, Lieske, J, Guenther, S, Reinke, P.Y.A, Ewert, W, Loboda, J, Karnicar, K, Usenik, A, Lindic, N, Sekirnik, A, Chapman, H.N, Hinrichs, W, Turk, D, Meents, A.
Deposit date:2022-05-20
Release date:2023-05-31
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural Elucidation and Antiviral Activity of Covalent Cathepsin L Inhibitors.
J.Med.Chem., 67, 2024
8A4V
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BU of 8a4v by Molmil
Crystal structure of human cathepsin L with covalently bound E-64
Descriptor: Cathepsin L, DI(HYDROXYETHYL)ETHER, DIMETHYL SULFOXIDE, ...
Authors:Falke, S, Lieske, J, Guenther, S, Reinke, P.Y.A, Ewert, W, Loboda, J, Karnicar, K, Usenik, A, Lindic, N, Sekirnik, A, Chapman, H.N, Hinrichs, W, Turk, D, Meents, A.
Deposit date:2022-06-13
Release date:2023-07-05
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structural Elucidation and Antiviral Activity of Covalent Cathepsin L Inhibitors.
J.Med.Chem., 67, 2024
8A4X
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BU of 8a4x by Molmil
Crystal structure of human Cathepsin L with covalently bound Calpain inhibitor III
Descriptor: (phenylmethyl) N-[(2S)-3-methyl-1-oxidanylidene-1-[[(2S)-1-oxidanyl-3-phenyl-propan-2-yl]amino]butan-2-yl]carbamate, Cathepsin L, DI(HYDROXYETHYL)ETHER, ...
Authors:Falke, S, Lieske, J, Guenther, S, Reinke, P.Y.A, Ewert, W, Loboda, J, Karnicar, K, Usenik, A, Lindic, N, Sekirnik, A, Chapman, H.N, Hinrichs, W, Turk, D, Meents, A.
Deposit date:2022-06-13
Release date:2023-07-05
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural Elucidation and Antiviral Activity of Covalent Cathepsin L Inhibitors.
J.Med.Chem., 67, 2024
8A5B
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BU of 8a5b by Molmil
Crystal structure of human cathepsin L in complex with covalently bound MG-101
Descriptor: Calpain Inhibitor I, Cathepsin L, DI(HYDROXYETHYL)ETHER, ...
Authors:Falke, S, Lieske, J, Guenther, S, Reinke, P.Y.A, Ewert, W, Loboda, J, Karnicar, K, Usenik, A, Lindic, N, Sekirnik, A, Chapman, H.N, Hinrichs, W, Turk, D, Meents, A.
Deposit date:2022-06-14
Release date:2023-07-05
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural Elucidation and Antiviral Activity of Covalent Cathepsin L Inhibitors.
J.Med.Chem., 67, 2024

226707

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