Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 87 results

1P7M
DownloadVisualize
BU of 1p7m by Molmil
SOLUTION STRUCTURE AND BASE PERTURBATION STUDIES REVEAL A NOVEL MODE OF ALKYLATED BASE RECOGNITION BY 3-METHYLADENINE DNA GLYCOSYLASE I
Descriptor: 3-METHYL-3H-PURIN-6-YLAMINE, DNA-3-methyladenine glycosylase I, ZINC ION
Authors:Cao, C, Kwon, K, Jiang, Y.L, Drohat, A.C, Stivers, J.T.
Deposit date:2003-05-02
Release date:2003-11-25
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure and base perturbation studies reveal a novel mode of alkylated base recognition by 3-methyladenine DNA glycosylase I
J.Biol.Chem., 278, 2003
7S8O
DownloadVisualize
BU of 7s8o by Molmil
CryoEM structure of Gi-coupled MRGPRX2 with small molecule agonist (R)-Zinc-3573
Descriptor: (3R)-N,N-dimethyl-1-[(8S)-5-phenylpyrazolo[1,5-a]pyrimidin-7-yl]pyrrolidin-3-amine, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:Cao, C, Fay, J.F, Gumpper, R.H, Roth, B.L.
Deposit date:2021-09-18
Release date:2021-11-17
Last modified:2024-11-13
Method:ELECTRON MICROSCOPY (2.58 Å)
Cite:Structure, function and pharmacology of human itch GPCRs.
Nature, 600, 2021
7S8L
DownloadVisualize
BU of 7s8l by Molmil
CryoEM structure of Gq-coupled MRGPRX2 with peptide agonist Cortistatin-14
Descriptor: Cortistatin 14, Gs-mini-Gq chimera, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
Authors:Cao, C, Fay, J.F, Gumpper, R.H, Roth, B.L.
Deposit date:2021-09-18
Release date:2021-11-17
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (2.45 Å)
Cite:Structure, function and pharmacology of human itch GPCRs.
Nature, 600, 2021
7S8P
DownloadVisualize
BU of 7s8p by Molmil
CryoEM structure of Gq-coupled MRGPRX4 with small molecule agonist MS47134
Descriptor: Gs-mini-Gq chimera, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:Cao, C, Fay, J.F, Gumpper, R.H, Roth, B.L.
Deposit date:2021-09-18
Release date:2021-11-17
Last modified:2024-10-30
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:Structure, function and pharmacology of human itch GPCRs.
Nature, 600, 2021
7S8M
DownloadVisualize
BU of 7s8m by Molmil
CryoEM structure of Gi-coupled MRGPRX2 with peptide agonist Cortistatin-14
Descriptor: Cortistatin 14, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:Cao, C, Fay, J.F, Gumpper, R.H, Roth, B.L.
Deposit date:2021-09-18
Release date:2021-11-17
Last modified:2024-11-20
Method:ELECTRON MICROSCOPY (2.54 Å)
Cite:Structure, function and pharmacology of human itch GPCRs.
Nature, 600, 2021
7S8N
DownloadVisualize
BU of 7s8n by Molmil
CryoEM structure of Gq-coupled MRGPRX2 with small molecule agonist (R)-Zinc-3573
Descriptor: (3R)-N,N-dimethyl-1-[(8S)-5-phenylpyrazolo[1,5-a]pyrimidin-7-yl]pyrrolidin-3-amine, Gs-mini-Gq chimera, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
Authors:Cao, C, Fay, J.F, Gumpper, R.H, Roth, B.L.
Deposit date:2021-09-18
Release date:2021-11-17
Last modified:2024-11-13
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Structure, function and pharmacology of human itch GPCRs.
Nature, 600, 2021
5ZKP
DownloadVisualize
BU of 5zkp by Molmil
Crystal structure of the human platelet-activating factor receptor in complex with SR 27417
Descriptor: FLAVIN MONONUCLEOTIDE, N1,N1-dimethyl-N2-[(pyridin-3-yl)methyl]-N2-{4-[2,4,6-tri(propan-2-yl)phenyl]-1,3-thiazol-2-yl}ethane-1,2-diamine, Platelet-activating factor receptor,Flavodoxin,Platelet-activating factor receptor
Authors:Cao, C, Zhao, Q, Zhang, X.C, Wu, B.
Deposit date:2018-03-25
Release date:2018-06-20
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.81 Å)
Cite:Structural basis for signal recognition and transduction by platelet-activating-factor receptor.
Nat. Struct. Mol. Biol., 25, 2018
5ZKQ
DownloadVisualize
BU of 5zkq by Molmil
Crystal structure of the human platelet-activating factor receptor in complex with ABT-491
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, 4-ethynyl-3-{3-fluoro-4-[(2-methyl-1H-imidazo[4,5-c]pyridin-1-yl)methyl]benzene-1-carbonyl}-N,N-dimethyl-1H-indole-1-carboxamide, Platelet-activating factor receptor,Endolysin,Endolysin,Platelet-activating factor receptor, ...
Authors:Cao, C, Zhao, Q, Zhang, X.C, Wu, B.
Deposit date:2018-03-25
Release date:2018-06-20
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural basis for signal recognition and transduction by platelet-activating-factor receptor.
Nat. Struct. Mol. Biol., 25, 2018
7D3V
DownloadVisualize
BU of 7d3v by Molmil
Non-specific and specific interactions work cooperatively to promote cytidine deamination catalyzed by APOBEC3A
Descriptor: DNA (5'-D(*AP*TP*TP*TP*TP*CP*AP*AP*TP*T)-3'), DNA dC->dU-editing enzyme APOBEC-3A, ZINC ION
Authors:Cao, C.Y, Liu, Y.P, Lan, W.X.
Deposit date:2020-09-21
Release date:2021-10-06
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Non-specific and specific interactions work cooperatively to promote cytidine deamination catalyzed by APOBEC3
To Be Published
7D3X
DownloadVisualize
BU of 7d3x by Molmil
Non-specific and specific interactions work cooperatively to promote cytidine deamination catalyzed by APOBEC3A
Descriptor: DNA (5'-D(*AP*TP*TP*TP*TP*CP*AP*AP*TP*T)-3'), DNA dC->dU-editing enzyme APOBEC-3A, ZINC ION
Authors:Cao, C, Liu, Y.
Deposit date:2020-09-21
Release date:2021-10-06
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Two different kinds of interaction modes of deaminase APOBEC3A with single-stranded DNA in solution detected by nuclear magnetic resonance.
Protein Sci., 31, 2022
7D3W
DownloadVisualize
BU of 7d3w by Molmil
Non-specific and specific interactions work cooperatively to promote cytidine deamination catalyzed by APOBEC3A
Descriptor: DNA (5'-D(*AP*TP*TP*TP*TP*CP*AP*AP*TP*T)-3'), DNA dC->dU-editing enzyme APOBEC-3A, ZINC ION
Authors:Cao, C, Liu, Y, Lan, W.
Deposit date:2020-09-21
Release date:2021-10-06
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Two different kinds of interaction modes of deaminase APOBEC3A with single-stranded DNA in solution detected by nuclear magnetic resonance.
Protein Sci., 31, 2022
6K3J
DownloadVisualize
BU of 6k3j by Molmil
Solution structure of APOBEC3G-CD2 with ssDNA, Product A
Descriptor: DNA (5'-D(*AP*TP*TP*CP*UP*(IUR)P*AP*AP*TP*T)-3'), DNA dC->dU-editing enzyme APOBEC-3G, ZINC ION
Authors:Cao, C, Yan, X, Lan, W, Wang, C.
Deposit date:2019-05-19
Release date:2019-06-12
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural Investigations on the Interactions between Cytidine Deaminase Human APOBEC3G and DNA.
Chem Asian J, 14, 2019
6K3K
DownloadVisualize
BU of 6k3k by Molmil
Solution structure of APOBEC3G-CD2 with ssDNA, Product B
Descriptor: DNA dC->dU-editing enzyme APOBEC-3G, DNA/RNA (5'-D(*AP*TP*TP*CP*UP*(ICY)P*AP*AP*TP*T)-3'), ZINC ION
Authors:Cao, C, Yan, X, Lan, W, Wang, C.
Deposit date:2019-05-19
Release date:2019-06-12
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural Investigations on the Interactions between Cytidine Deaminase Human APOBEC3G and DNA.
Chem Asian J, 14, 2019
8YRG
DownloadVisualize
BU of 8yrg by Molmil
CryoEM structure of fospropofol-bound MRGPRX4-Gq complex
Descriptor: Gs-mini-Gq chimera, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:Cao, C, Fay, J.F, Roth, B.L.
Deposit date:2024-03-21
Release date:2024-05-22
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (3.14 Å)
Cite:MRGPRX4 mediates phospho-drug-associated pruritus in a humanized mouse model.
Sci Transl Med, 16, 2024
5J3G
DownloadVisualize
BU of 5j3g by Molmil
Solution NMR structure of PT-free dsDNA from Streptomyces lividans
Descriptor: DNA (5'-D(*CP*GP*GP*CP*CP*GP*CP*CP*GP*A)-3'), DNA (5'-D(*TP*CP*GP*GP*CP*GP*GP*CP*CP*G)-3')
Authors:Lan, W, Cao, C.
Deposit date:2016-03-30
Release date:2016-06-22
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural investigation into physiological DNA phosphorothioate modification
Sci Rep, 6, 2016
1J0Q
DownloadVisualize
BU of 1j0q by Molmil
Solution Structure of Oxidized Bovine Microsomal Cytochrome b5 mutant V61H
Descriptor: PROTOPORPHYRIN IX CONTAINING FE, cytochrome b5
Authors:Wu, H, Huang, Z, Cao, C, Zhang, Q, Wang, Y.-H, Ma, J.-B, Xue, L.-L.
Deposit date:2002-11-20
Release date:2003-08-12
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:The solution structure of the oxidized bovine microsomal cytochrome b5 mutant V61H
Biochem.Biophys.Res.Commun., 307, 2003
1G7R
DownloadVisualize
BU of 1g7r by Molmil
X-RAY STRUCTURE OF TRANSLATION INITIATION FACTOR IF2/EIF5B
Descriptor: TRANSLATION INITIATION FACTOR IF2/EIF5B
Authors:Roll-Mecak, A, Cao, C, Dever, T.E, Burley, S.K.
Deposit date:2000-11-14
Release date:2000-12-06
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:X-Ray structures of the universal translation initiation factor IF2/eIF5B: conformational changes on GDP and GTP binding.
Cell(Cambridge,Mass.), 103, 2000
1NKU
DownloadVisualize
BU of 1nku by Molmil
NMR Solution Structure of Zinc-binding protein 3-methyladenine DNA glycosylase I (TAG)
Descriptor: 3-Methyladenine Dna Glycosylase I (TAG), ZINC ION
Authors:Kwon, K, Cao, C, Stivers, J.T.
Deposit date:2003-01-03
Release date:2003-06-03
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:A Novel Zinc Snap Motif Conveys Structural Stability to 3-Methyladenine DNA Glycosylase I
J.Biol.Chem., 278, 2003
1S8K
DownloadVisualize
BU of 1s8k by Molmil
Solution Structure of BmKK4, A Novel Potassium Channel Blocker from Scorpion Buthus martensii Karsch, 25 structures
Descriptor: Toxin BmKK4
Authors:Zhang, N, Chen, X, Li, M, Cao, C, Wang, Y, Hu, G, Wu, H.
Deposit date:2004-02-02
Release date:2005-02-08
Last modified:2024-10-30
Method:SOLUTION NMR
Cite:Solution structure of BmKK4, the first member of subfamily alpha-KTx 17 of scorpion toxins
Biochemistry, 43, 2004
1WM8
DownloadVisualize
BU of 1wm8 by Molmil
Solution Structure of BmP03 from the Venom of Scorpion Buthus martensii Karsch, 10 structures
Descriptor: Neurotoxin BmP03
Authors:Wu, H, He, F, Li, Y, Wu, G, Cao, C, Chen, X.
Deposit date:2004-07-05
Release date:2004-07-27
Last modified:2024-10-30
Method:SOLUTION NMR
Cite:Three-Dimensional Structure of BmP03 from Venom of Scorpion Buthus martensii Karsch
Acta Chim.Sinica, 58, 2000
1G7S
DownloadVisualize
BU of 1g7s by Molmil
X-RAY STRUCTURE OF TRANSLATION INITIATION FACTOR IF2/EIF5B COMPLEXED WITH GDP
Descriptor: GUANOSINE-5'-DIPHOSPHATE, TRANSLATION INITIATION FACTOR IF2/EIF5B
Authors:Roll-Mecak, A, Cao, C, Dever, T.E, Burley, S.K.
Deposit date:2000-11-14
Release date:2000-12-06
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2 Å)
Cite:X-Ray structures of the universal translation initiation factor IF2/eIF5B: conformational changes on GDP and GTP binding.
Cell(Cambridge,Mass.), 103, 2000
8KFL
DownloadVisualize
BU of 8kfl by Molmil
Stable G-quadruplex Conformation Formed in Promoter Region of Oncogene RET in 100 mM Na+
Descriptor: DNA (5'-D(*GP*GP*GP*TP*AP*GP*GP*GP*GP*CP*GP*GP*GP*GP*CP*GP*GP*GP*GP*CP*G)-3')
Authors:Zhang, Y.P, Lan, W.X, Yin, S.W, Liu, Z.J, Xue, H.J, Cao, C.Y.
Deposit date:2023-08-15
Release date:2024-09-04
Method:SOLUTION NMR
Cite:Stable G-quadruplex Conformation Formed in Promoter Region of Oncogene RET Indicates New Target for Anti-cancer Drug Screening
To Be Published
1G7T
DownloadVisualize
BU of 1g7t by Molmil
X-RAY STRUCTURE OF TRANSLATION INITIATION FACTOR IF2/EIF5B COMPLEXED WITH GDPNP
Descriptor: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, TRANSLATION INITIATION FACTOR IF2/EIF5B
Authors:Roll-Mecak, A, Cao, C, Dever, T.E, Burley, S.K.
Deposit date:2000-11-14
Release date:2000-12-01
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2 Å)
Cite:X-Ray structures of the universal translation initiation factor IF2/eIF5B: conformational changes on GDP and GTP binding.
Cell(Cambridge,Mass.), 103, 2000
1S0U
DownloadVisualize
BU of 1s0u by Molmil
eIF2gamma apo
Descriptor: Translation initiation factor 2 gamma subunit, ZINC ION
Authors:Roll-Mecak, A, Alone, P, Cao, C, Dever, T.E, Burley, S.K.
Deposit date:2004-01-04
Release date:2004-01-20
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:X-ray Structure of Translation Initiation Factor eIF2gamma: IMPLICATIONS FOR tRNA AND eIF2alpha BINDING.
J.Biol.Chem., 279, 2004
4ROV
DownloadVisualize
BU of 4rov by Molmil
The crystal structure of novel APOBEC3G CD2 head-to-tail dimer suggests the binding mode of full-length APOBEC3G to HIV-1 ssDNA
Descriptor: DNA dC->dU-editing enzyme APOBEC-3G, ZINC ION
Authors:Lu, X, Zhang, T, Xu, Z, Liu, S, Zhao, B, Lan, W, Wang, C, Ding, J, Cao, C.
Deposit date:2014-10-29
Release date:2014-12-31
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of DNA cytidine deaminase ABOBEC3G catalytic deamination domain suggests a binding mode of full-length enzyme to single-stranded DNA
J.Biol.Chem., 290, 2015

 

1234>

227561

PDB entries from 2024-11-20

PDB statisticsPDBj update infoContact PDBjnumon