Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 90 results

4EOT
DownloadVisualize
BU of 4eot by Molmil
Crystal structure of the MafA homodimer bound to the consensus MARE
Descriptor: 5'-D(*CP*CP*CP*TP*GP*CP*TP*GP*AP*CP*TP*CP*AP*GP*CP*AP*CP*CP*G)-3', 5'-D(*CP*CP*GP*GP*TP*GP*CP*TP*GP*AP*GP*TP*CP*AP*GP*CP*AP*GP*G)-3', SULFATE ION, ...
Authors:Lu, X, Guanga, G, Wan, C, Rose, R.B.
Deposit date:2012-04-15
Release date:2012-11-28
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.855 Å)
Cite:A Novel DNA Binding Mechanism for maf Basic Region-Leucine Zipper Factors Inferred from a MafA-DNA Complex Structure and Binding Specificities.
Biochemistry, 51, 2012
3C1B
DownloadVisualize
BU of 3c1b by Molmil
The effect of H3 K79 dimethylation and H4 K20 trimethylation on nucleosome and chromatin structure
Descriptor: Histone 2, H2bf, Histone H2A type 1, ...
Authors:Lu, X, Simon, M, Chodaparambil, J, Hansen, J, Shokat, K, Luger, K.
Deposit date:2008-01-22
Release date:2008-10-07
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The effect of H3K79 dimethylation and H4K20 trimethylation on nucleosome and chromatin structure.
Nat.Struct.Mol.Biol., 15, 2008
3C1C
DownloadVisualize
BU of 3c1c by Molmil
The effect of H3 K79 dimethylation and H4 K20 trimethylation on nucleosome and chromatin structure
Descriptor: Histone 2, H2bf, Histone H2A type 1, ...
Authors:Lu, X, Simon, M, Chodaparambil, J, Hansen, J, Shokat, K, Luger, K.
Deposit date:2008-01-22
Release date:2008-10-07
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:The effect of H3K79 dimethylation and H4K20 trimethylation on nucleosome and chromatin structure.
Nat.Struct.Mol.Biol., 15, 2008
4ROV
DownloadVisualize
BU of 4rov by Molmil
The crystal structure of novel APOBEC3G CD2 head-to-tail dimer suggests the binding mode of full-length APOBEC3G to HIV-1 ssDNA
Descriptor: DNA dC->dU-editing enzyme APOBEC-3G, ZINC ION
Authors:Lu, X, Zhang, T, Xu, Z, Liu, S, Zhao, B, Lan, W, Wang, C, Ding, J, Cao, C.
Deposit date:2014-10-29
Release date:2014-12-31
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of DNA cytidine deaminase ABOBEC3G catalytic deamination domain suggests a binding mode of full-length enzyme to single-stranded DNA
J.Biol.Chem., 290, 2015
4ROW
DownloadVisualize
BU of 4row by Molmil
The crystal structure of novel APOBEC3G CD2 head-to-tail dimer suggests the binding mode of full-length APOBEC3G to HIV-1 ssDNA
Descriptor: DNA dC->dU-editing enzyme APOBEC-3G, ZINC ION
Authors:Lu, X, Zhang, T, Xu, Z, Liu, S, Zhao, B, Lan, W, Wang, C, Ding, J, Cao, C.
Deposit date:2014-10-29
Release date:2014-12-31
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of DNA cytidine deaminase ABOBEC3G catalytic deamination domain suggests a binding mode of full-length enzyme to single-stranded DNA
J.Biol.Chem., 290, 2015
5H8Z
DownloadVisualize
BU of 5h8z by Molmil
Crystal structure of the C49A C353A mutant Fenna-Matthews-Olson Protein from Chlorobaculum Tepidum
Descriptor: BACTERIOCHLOROPHYLL A, Bacteriochlorophyll a protein
Authors:Lu, X, Cuneo, M.J, Myles, D.A.A.
Deposit date:2015-12-25
Release date:2016-05-18
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Perturbation of bacteriochlorophyll molecules in Fenna-Matthews-Olson protein complexes through mutagenesis of cysteine residues.
Biochim.Biophys.Acta, 1857, 2016
8E6O
DownloadVisualize
BU of 8e6o by Molmil
Crystal structure of human GCN5 histone acetyltransferase domain
Descriptor: Histone acetyltransferase KAT2A, S-{(3S,5R,9R)-1-[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-4-hydroxy-3-(phosphonooxy)oxolan-2-yl]-3,5,9-trihydroxy-8,8-dimethyl-3,5,10,14-tetraoxo-2,4,6-trioxa-11,15-diaza-3lambda~5~,5lambda~5~-diphosphaheptadecan-17-yl} (2R)-2-hydroxypropanethioate
Authors:Lu, X.T, Tao, Y.J.
Deposit date:2022-08-23
Release date:2024-02-28
Method:X-RAY DIFFRACTION (2.37 Å)
Cite:Crystal structure of human GCN5 histone acetyltransferase domain
To Be Published
6CO4
DownloadVisualize
BU of 6co4 by Molmil
Structure of the Rpn13-Rpn2 complex provides insights for Rpn13 and Uch37 as anticancer targets
Descriptor: 26S proteasome non-ATPase regulatory subunit 1, Proteasomal ubiquitin receptor ADRM1
Authors:Lu, X, Walters, K.J.
Deposit date:2018-03-11
Release date:2018-04-04
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structure of the Rpn13-Rpn2 complex provides insights for Rpn13 and Uch37 as anticancer targets.
Nat Commun, 8, 2017
6UYI
DownloadVisualize
BU of 6uyi by Molmil
hRpn13:hRpn2:K48-diubiquitin
Descriptor: 26S proteasome non-ATPase regulatory subunit 1, Proteasomal ubiquitin receptor ADRM1, Ubiquitin
Authors:Lu, X, Walters, K.J.
Deposit date:2019-11-13
Release date:2020-03-11
Last modified:2022-03-16
Method:SOLUTION NMR
Cite:An Extended Conformation for K48 Ubiquitin Chains Revealed by the hRpn2:Rpn13:K48-Diubiquitin Structure.
Structure, 28, 2020
8HD3
DownloadVisualize
BU of 8hd3 by Molmil
Farnesoid X Receptor Agonists_FXR fused with a HD3 peptide
Descriptor: Farnesoid X Receptor, [(3s,5s,7s)-adamantan-1-yl][4-(2-amino-5-chlorophenyl)piperazin-1-yl]methanone
Authors:Lu, X, Zhang, H.
Deposit date:2022-11-03
Release date:2023-11-08
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Crystal structure of FXR fused with a HD3 peptide in complex with agonist QT0127
To Be Published
6UYJ
DownloadVisualize
BU of 6uyj by Molmil
hRpn13:hRpn2:K48-diubiquitin
Descriptor: 26S proteasome non-ATPase regulatory subunit 1, Proteasomal ubiquitin receptor ADRM1, Ubiquitin
Authors:Lu, X, Walters, K.J.
Deposit date:2019-11-13
Release date:2020-03-11
Last modified:2020-05-20
Method:SOLUTION NMR
Cite:An Extended Conformation for K48 Ubiquitin Chains Revealed by the hRpn2:Rpn13:K48-Diubiquitin Structure.
Structure, 28, 2020
2R7S
DownloadVisualize
BU of 2r7s by Molmil
Crystal Structure of Rotavirus SA11 VP1 / RNA (UGUGCC) complex
Descriptor: PHOSPHATE ION, RNA (5'-R(*UP*GP*UP*GP*CP*C)-3'), RNA-dependent RNA polymerase
Authors:Lu, X, Harrison, S.C, Tao, Y.J, Patton, J.T, Nibert, M.L.
Deposit date:2007-09-10
Release date:2008-07-29
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3.24 Å)
Cite:Mechanism for coordinated RNA packaging and genome replication by rotavirus polymerase VP1.
Structure, 16, 2008
2R7T
DownloadVisualize
BU of 2r7t by Molmil
Crystal Structure of Rotavirus SA11 VP1/RNA (UGUGAACC) Complex
Descriptor: RNA (5'-R(*UP*GP*UP*GP*AP*AP*CP*C)-3'), RNA-dependent RNA polymerase
Authors:Lu, X, Harrison, S.C, Tao, Y.J, Patton, J.T, Nibert, M.L.
Deposit date:2007-09-10
Release date:2008-07-29
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3 Å)
Cite:Mechanism for coordinated RNA packaging and genome replication by rotavirus polymerase VP1.
Structure, 16, 2008
2R7V
DownloadVisualize
BU of 2r7v by Molmil
Crystal Structure of Rotavirus SA11 VP1/RNA (GGCUUU) Complex
Descriptor: RNA (5'-R(*G*GP*CP*UP*UP*U)-3'), RNA-dependent RNA polymerase
Authors:Lu, X, Harrison, S.C, Tao, Y.J, Patton, J.T, Nibert, M.L.
Deposit date:2007-09-10
Release date:2008-07-29
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Mechanism for coordinated RNA packaging and genome replication by rotavirus polymerase VP1.
Structure, 16, 2008
2R7U
DownloadVisualize
BU of 2r7u by Molmil
Crystal Structure of Rotavirus SA11 VP1/RNA (AAAAGCC) Complex
Descriptor: RNA (5'-R(*AP*A*AP*AP*GP*CP*C)-3'), RNA-dependent RNA polymerase
Authors:Lu, X, Harrison, S.C, Tao, Y.J, Patton, J.T, Nibert, M.L.
Deposit date:2007-09-10
Release date:2008-07-29
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Mechanism for coordinated RNA packaging and genome replication by rotavirus polymerase VP1.
Structure, 16, 2008
2R7X
DownloadVisualize
BU of 2r7x by Molmil
Crystal Structure of Rotavirus SA11 VP1/RNA (UGUGACC)/GTP complex
Descriptor: GUANOSINE-5'-TRIPHOSPHATE, RNA (5'-R(*UP*GP*UP*GP*AP*CP*C)-3'), RNA-dependent RNA polymerase
Authors:Lu, X, Harrison, S.C, Tao, Y.J, Patton, J.T, Nibert, M.L.
Deposit date:2007-09-10
Release date:2008-07-29
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Mechanism for coordinated RNA packaging and genome replication by rotavirus polymerase VP1.
Structure, 16, 2008
6IVZ
DownloadVisualize
BU of 6ivz by Molmil
Crystal structure of 5A ScFv complexed with YFV-China sE in postfusion state
Descriptor: Envelope protein, Heavy chain of monoclonal antibody 5A, Light chain of monoclonal antibody 5A
Authors:Lu, X.S, Xiao, H.X, Li, S.H, Pang, X.F.
Deposit date:2018-12-04
Release date:2019-02-13
Last modified:2019-02-27
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Double Lock of a Human Neutralizing and Protective Monoclonal Antibody Targeting the Yellow Fever Virus Envelope.
Cell Rep, 26, 2019
6IW0
DownloadVisualize
BU of 6iw0 by Molmil
Crystal structure of 5A ScFv in complex with YFV-17D sE in postfusion state
Descriptor: Envelope protein E, Heavy chain of monoclonal antibody 5A, Light chain of monoclonal antibody 5A
Authors:Lu, X.S, Xiao, H.X, Li, S.H, Pang, X.F.
Deposit date:2018-12-04
Release date:2019-02-13
Last modified:2019-02-27
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Double Lock of a Human Neutralizing and Protective Monoclonal Antibody Targeting the Yellow Fever Virus Envelope.
Cell Rep, 26, 2019
7KXI
DownloadVisualize
BU of 7kxi by Molmil
Structure of XL5-ligated hRpn13 Pru domain
Descriptor: 2-{[(2S)-2-cyano-3-{3-[(4-methylbenzene-1-carbonyl)amino]phenyl}propanoyl]amino}benzoic acid, Proteasomal ubiquitin receptor ADRM1
Authors:Lu, X, Walters, K.J.
Deposit date:2020-12-03
Release date:2021-12-15
Last modified:2021-12-29
Method:SOLUTION NMR
Cite:Structure-guided bifunctional molecules hit a DEUBAD-lacking hRpn13 species upregulated in multiple myeloma.
Nat Commun, 12, 2021
4PFU
DownloadVisualize
BU of 4pfu by Molmil
Crystal structure of mannobiose bound oligopeptide ABC transporter, periplasmic oligopeptide-binding protein (TM1226) from THERMOTOGA MARITIMA at 2.05 A resolution
Descriptor: ABC transporter substrate-binding protein, MAGNESIUM ION, SULFATE ION, ...
Authors:Lu, X, Ghimire-Rijal, S, Cuneo, M.J.
Deposit date:2014-04-30
Release date:2014-09-17
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.049 Å)
Cite:Duplication of Genes in an ATP-binding Cassette Transport System Increases Dynamic Range While Maintaining Ligand Specificity.
J.Biol.Chem., 289, 2014
2R7R
DownloadVisualize
BU of 2r7r by Molmil
Crystal Structure of Rotavirus SA11 VP1/RNA (UGUGACC) complex
Descriptor: RNA (5'-R(*UP*GP*UP*GP*AP*CP*C)-3'), RNA-dependent RNA polymerase
Authors:Lu, X, Harrison, S.C, Tao, Y.J, Patton, J.T, Nibert, M.L.
Deposit date:2007-09-09
Release date:2008-07-29
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Mechanism for coordinated RNA packaging and genome replication by rotavirus polymerase VP1.
Structure, 16, 2008
2R7W
DownloadVisualize
BU of 2r7w by Molmil
Crystal Structure of Rotavirus SA11 VP1/RNA (UGUGACC)/mRNA 5'-CAP (m7GpppG) complex
Descriptor: GUANOSINE-5'-TRIPHOSPHATE, RNA (5'-R(*UP*GP*UP*GP*AP*CP*C)-3'), RNA-dependent RNA polymerase
Authors:Lu, X, Harrison, S.C, Tao, Y.J, Patton, J.T, Nibert, M.L.
Deposit date:2007-09-10
Release date:2008-07-29
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Mechanism for coordinated RNA packaging and genome replication by rotavirus polymerase VP1.
Structure, 16, 2008
6IW2
DownloadVisualize
BU of 6iw2 by Molmil
Crystal structure of 5A ScFv in complex with YFV-17D sE in prefusion state
Descriptor: Envelope protein E, Heavy chain of monoclonal antibody 5A, Light chain of monoclonal antibody 5A
Authors:Lu, X.S, Xiao, H.X, Li, S.H, Pang, X.F.
Deposit date:2018-12-04
Release date:2019-02-13
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Double Lock of a Human Neutralizing and Protective Monoclonal Antibody Targeting the Yellow Fever Virus Envelope.
Cell Rep, 26, 2019
6IW5
DownloadVisualize
BU of 6iw5 by Molmil
Crystal structure of YFV-China sE in prefusion state
Descriptor: Envelope protein
Authors:Lu, X.S, Xiao, H.X, Li, S.H, Pang, X.F.
Deposit date:2018-12-04
Release date:2019-02-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Double Lock of a Human Neutralizing and Protective Monoclonal Antibody Targeting the Yellow Fever Virus Envelope.
Cell Rep, 26, 2019
6IW1
DownloadVisualize
BU of 6iw1 by Molmil
Crystal structure of YFV-17D sE in postfusion state
Descriptor: Envelope protein E
Authors:Lu, X.S, Xiao, H.X, Li, S.H, Pang, X.F.
Deposit date:2018-12-04
Release date:2019-02-13
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Double Lock of a Human Neutralizing and Protective Monoclonal Antibody Targeting the Yellow Fever Virus Envelope.
Cell Rep, 26, 2019

 

1234>

218853

PDB entries from 2024-04-24

PDB statisticsPDBj update infoContact PDBjnumon