The effect of H3 K79 dimethylation and H4 K20 trimethylation on nucleosome and chromatin structure

Summary for 3C1B

Related1KX5 1ZLA 1aoi 1f66 1kx4 1kx3 3C1C
DescriptorHistone H3-like, Histone H4, Histone H2A type 1, ... (6 entities in total)
Functional Keywordsnucleosome, dimethylated histone, trimethylated histone, methylation, nucleosomal surface, histone modification, nucleosomal array, chromatin, acetylation, chromosomal protein, dna-binding, nucleosome core, nucleus, phosphoprotein, ubl conjugation, structural protein-dna complex, structural protein/dna
Biological sourceXenopus laevis (clawed frog,common platanna,platanna)
Cellular locationNucleus P02302 P62799 P06897
Nucleus (By similarity) Q28D68
Total number of polymer chains10
Total molecular weight198996.85
Lu, X.,Simon, M.,Chodaparambil, J.,Hansen, J.,Shokat, K.,Luger, K. (deposition date: 2008-01-22, release date: 2008-10-07, Last modification date: 2011-07-13)
Primary citation
Lu, X.,Simon, M.D.,Chodaparambil, J.V.,Hansen, J.C.,Shokat, K.M.,Luger, K.
The effect of H3K79 dimethylation and H4K20 trimethylation on nucleosome and chromatin structure.
Nat.Struct.Mol.Biol., 15:1122-1124, 2008
PubMed: 18794842 (PDB entries with the same primary citation)
DOI: 10.1038/nsmb.1489
MImport into Mendeley
Experimental method

Structure validation

RfreeClashscoreRamachandran outliersSidechain outliersRSRZ outliers 0.26414 1.2% 4.4% 7.9%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution
Download full validation reportDownload
PDB entries from 2020-10-28