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PDB: 89035 results

6Z0D
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BU of 6z0d by Molmil
tRNA-Guanine Transglycosylase (TGT) H333F mutant crystallised at pH 5.5
Descriptor: GLYCEROL, Queuine tRNA-ribosyltransferase, ZINC ION
Authors:Nguyen, A, Heine, A, Klebe, G.
Deposit date:2020-05-08
Release date:2020-05-20
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Mutation study on tRNA-guanine transglycosylase for catalysis testing
To Be Published
7BEU
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BU of 7beu by Molmil
Human glutathione transferase M1-1
Descriptor: Glutathione S-transferase Mu 1, SODIUM ION
Authors:Papageorgiou, A.C, Poudel, N.
Deposit date:2020-12-28
Release date:2022-01-12
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:Ligandability Assessment of Human Glutathione Transferase M1-1 Using Pesticides as Chemical Probes.
Int J Mol Sci, 23, 2022
6NSF
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BU of 6nsf by Molmil
Crystal structure of the A/Brisbane/10/2007 (H3N2) influenza virus hemagglutinin G186V/L194P mutant in complex with 3'-SLNLN
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[beta-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Wu, N.C, Wilson, I.A.
Deposit date:2019-01-24
Release date:2019-04-24
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Preventing an Antigenically Disruptive Mutation in Egg-Based H3N2 Seasonal Influenza Vaccines by Mutational Incompatibility.
Cell Host Microbe, 25, 2019
6WN9
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BU of 6wn9 by Molmil
Structure of Staphylococcus aureus peptidoglycan O-acetyltransferase A (OatA) C-terminal catalytic domain, Zn-bound
Descriptor: Acetyltransferase, ZINC ION
Authors:Jones, C.J, Sychantha, D, Howell, P.L, Clarke, A.J.
Deposit date:2020-04-22
Release date:2020-05-06
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structural basis for theO-acetyltransferase function of the extracytoplasmic domain of OatA fromStaphylococcus aureus.
J.Biol.Chem., 295, 2020
8PKI
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BU of 8pki by Molmil
Cryo-EM structure of NR5A2-nucleosome complex SHL+5.5
Descriptor: DNA, Histone H2A, Histone H2B type 1-C/E/G, ...
Authors:Kobayashi, W, Sappler, A, Bollschweiler, D, Kummecke, M, Basquin, J, Arslantas, E, Ruangroengkulrith, S, Hornberger, R, Duderstadt, K, Tachibana, K.
Deposit date:2023-06-26
Release date:2024-02-28
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (2.58 Å)
Cite:Nucleosome-bound NR5A2 structure reveals pioneer factor mechanism by DNA minor groove anchor competition.
Nat.Struct.Mol.Biol., 31, 2024
7TIL
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BU of 7til by Molmil
CryoEM structure of JetD from Pseudomonas aeruginosa
Descriptor: JetD
Authors:Deep, A, Gu, Y, Gao, Y, Ego, K, Herzik, M, Zhou, H, Corbett, K.
Deposit date:2022-01-13
Release date:2022-10-05
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:The SMC-family Wadjet complex protects bacteria from plasmid transformation by recognition and cleavage of closed-circular DNA.
Mol.Cell, 82, 2022
8E9J
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BU of 8e9j by Molmil
Crystal structure of E. coli aspartate aminotransferase mutant HEX in the ligand-free form at 278 K
Descriptor: Aspartate aminotransferase, PYRIDOXAL-5'-PHOSPHATE, SULFATE ION
Authors:Chica, R.A, St-Jacques, A.D, Rodriguez, J.M, Thompson, M.C.
Deposit date:2022-08-26
Release date:2022-11-02
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Computational remodeling of an enzyme conformational landscape for altered substrate selectivity.
Nat Commun, 14, 2023
6YYZ
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BU of 6yyz by Molmil
tRNA-Guanine Transglycosylase (TGT) labeled with 5-fluorotryptophan in co-crystallized complex with 6-amino-2-(methylamino)-4-(2-((2R,3R,4R,5R)-3,4,5-trimethoxytetrahydrofuran-2-yl)ethyl)-1,7-dihydro-8H-imidazo[4,5-g]quinazolin-8-one
Descriptor: 6-amino-2-(methylamino)-4-(2-((2R,3R,4R,5R)-3,4,5-trimethoxytetrahydrofuran-2-yl)ethyl)-1H-imidazo[4,5-g]quinazolin-8(7H)-one, Queuine tRNA-ribosyltransferase, ZINC ION
Authors:Nguyen, A, Heine, A, Klebe, G.
Deposit date:2020-05-06
Release date:2020-05-13
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.21 Å)
Cite:Co-crystallization, 19F NMR and nanoESI-MS reveal dimer disturbing inhibitors and conformational changes at dimer contacts
To Be Published
7BB0
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BU of 7bb0 by Molmil
Crystal structure of the cAMP-dependent protein kinase A cocrystallized with NAT22-366511 and PKI (5-24)
Descriptor: (R)-3,3-dimethyl-5-oxo-5-(6-(3-(pyridin-4-yl)-1,2,4-oxadiazol-5-yl)-1,4,6,7-tetrahydro-5H-imidazo[4,5-c]pyridin-5-yl)pentanoic acid, cAMP-dependent protein kinase catalytic subunit alpha, cAMP-dependent protein kinase inhibitor alpha
Authors:Oebbeke, M, Mueller, J, Glinca, S, Heine, A, Klebe, G.
Deposit date:2020-12-16
Release date:2022-01-12
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal structure of the cAMP-dependent protein kinase A cocrystallized with NAT22-366511 and PKI (5-24)
To Be Published
5NBU
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BU of 5nbu by Molmil
Crystal structure of native alpha-1-antitrypsin with seven stabilising mutations
Descriptor: Alpha-1-antitrypsin, GLYCEROL, OXAMIC ACID
Authors:Huntington, J.A, Pomowski, A, Johnson, D.J.D.
Deposit date:2017-03-02
Release date:2018-03-21
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:CRYSTAL STRUCTURE OF THE Z VARIANT OF ALPHA-1-ANTITRYPSIN REVEALS STRUCTURAL AND DYNAMICAL CHANGES AND SUPPORTS A C-TERMINAL DOMAIN SWAP MECHANISM OF POLYMERIZATION
To Be Published
7U6P
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BU of 7u6p by Molmil
Structure of an intellectual disability-associated ornithine decarboxylase variant G84R
Descriptor: Ornithine decarboxylase, PHOSPHATE ION
Authors:Zhou, X.E, Schultz, C.R, Powell, K.S, Henrickson, A, Lamp, J, Brunzelle, J.S, Demeler, B, Vega, I.E, Bachmann, A.S, Melcher, K.
Deposit date:2022-03-04
Release date:2022-10-19
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structure and Enzymatic Activity of an Intellectual Disability-Associated Ornithine Decarboxylase Variant, G84R.
Acs Omega, 7, 2022
7BC1
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BU of 7bc1 by Molmil
Crystal structure of aldo-keto reductase from Agrobacterium tumefaciens in a ternary complex with NADPH and glucose
Descriptor: Aryl-alcohol dehydrogenase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, alpha-D-glucopyranose
Authors:Snow, A, Sharma, M, Davies, G.J.
Deposit date:2020-12-18
Release date:2022-01-12
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Oxidative desulfurization pathway for complete catabolism of sulfoquinovose by bacteria.
Proc.Natl.Acad.Sci.USA, 119, 2022
7U6U
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BU of 7u6u by Molmil
Structure of an intellectual disability-associated ornithine decarboxylase variant G84R in complex with PLP
Descriptor: Ornithine decarboxylase, PYRIDOXAL-5'-PHOSPHATE
Authors:Zhou, X.E, Schultz, C.R, Powell, K.S, Henrickson, A, Lamp, J, Brunzelle, J.S, Demeler, B, Vega, I.E, Bachmann, A.S, Melcher, K.
Deposit date:2022-03-06
Release date:2022-10-19
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structure and Enzymatic Activity of an Intellectual Disability-Associated Ornithine Decarboxylase Variant, G84R.
Acs Omega, 7, 2022
6TU2
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BU of 6tu2 by Molmil
Crystal structure of rat annexin A11
Descriptor: Annexin, CALCIUM ION
Authors:Raasakka, A, Lillebostad, P, Vedeler, A, Kursula, P.
Deposit date:2020-01-01
Release date:2020-05-06
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of the ALS Mutation Target Annexin A11 Reveals a Stabilising N-Terminal Segment.
Biomolecules, 10, 2020
8DU3
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BU of 8du3 by Molmil
Crystal structure of A2AAR-StaR2-bRIL in complex with compound 21a
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, (4M)-6-bromo-4-(furan-2-yl)quinazolin-2-amine, Adenosine receptor A2a, ...
Authors:Shiriaeva, A, Stauch, B, Han, G.W, Cherezov, V.
Deposit date:2022-07-26
Release date:2022-08-10
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:High ligand efficiency quinazoline compounds as novel A 2A adenosine receptor antagonists.
Eur.J.Med.Chem., 241, 2022
6WQV
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BU of 6wqv by Molmil
GH5-4 broad specificity endoglucanase from Ruminococcus champanellensis with bound cellotriose
Descriptor: 1,2-ETHANEDIOL, Endoglucanase, NITRATE ION, ...
Authors:Bianchetti, C.M, Bingman, C.A, Smith, R.W, Glasgow, E.M, Fox, B.G.
Deposit date:2020-04-29
Release date:2020-11-18
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:A structural and kinetic survey of GH5_4 endoglucanases reveals determinants of broad substrate specificity and opportunities for biomass hydrolysis.
J.Biol.Chem., 295, 2020
8UTT
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BU of 8utt by Molmil
KIF1A[1-393] P305L mutant AMP-PNP bound two-heads-bound state in complex with a microtubule
Descriptor: GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, Kinesin-like protein KIF1A, ...
Authors:Benoit, M.P.M.H, Rao, L, Asenjo, A.B, Gennerich, A, Sosa, H.
Deposit date:2023-10-31
Release date:2024-06-12
Last modified:2024-07-31
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Cryo-EM unveils kinesin KIF1A's processivity mechanism and the impact of its pathogenic variant P305L.
Nat Commun, 15, 2024
4Z2J
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BU of 4z2j by Molmil
Serratia marcescens Chitinase B complexed with macrolide inhibitor 31
Descriptor: (1R,2R,3R,6R,7S,8S,9R,10R,12R,13S,17S)-3-ethyl-2,10-dihydroxy-2,6,8,10,12,15,15,17-octamethyl-5-oxo-9-(prop-2-yn-1-yloxy)-4,14,16-trioxabicyclo[11.3.1]heptadec-7-yl {5-[N'-(methylcarbamoyl)carbamimidamido]pentyl}carbamate, Chitinase B, GLYCEROL, ...
Authors:Maita, N, Sugawara, A, Sunazuka, T.
Deposit date:2015-03-30
Release date:2015-07-01
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Creation of Customized Bioactivity within a 14-Membered Macrolide Scaffold: Design, Synthesis, and Biological Evaluation Using a Family-18 Chitinase
J.Med.Chem., 58, 2015
8PTK
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BU of 8ptk by Molmil
Composite structure of Dynein-Dynactin-JIP3-LIS1
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ARP1 actin related protein 1 homolog A, ...
Authors:Singh, K, Lau, C.K, Manigrasso, G, Gassmann, R, Carter, A.P.
Deposit date:2023-07-14
Release date:2024-03-27
Last modified:2024-04-10
Method:ELECTRON MICROSCOPY (10 Å)
Cite:Molecular mechanism of dynein-dynactin complex assembly by LIS1.
Science, 383, 2024
6QKY
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BU of 6qky by Molmil
Tryptophan synthase subunit alpha from Streptococcus pneumoniae with 3D domain swap in the core of TIM barrel
Descriptor: ACETIC ACID, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Michalska, K, Kowiel, M, Bigelow, L, Endres, M, Gilski, M, Jaskolski, M, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2019-01-30
Release date:2019-03-27
Last modified:2022-03-30
Method:X-RAY DIFFRACTION (2.54 Å)
Cite:3D domain swapping in the TIM barrel of the alpha subunit of Streptococcus pneumoniae tryptophan synthase.
Acta Crystallogr D Struct Biol, 76, 2020
8E9C
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BU of 8e9c by Molmil
Crystal structure of E. coli aspartate aminotransferase mutant AIFS in the ligand-free form at 100 K
Descriptor: Aspartate aminotransferase, PYRIDOXAL-5'-PHOSPHATE, SULFATE ION
Authors:Chica, R.A, St-Jacques, A.D, Rodriguez, J.M, Thompson, M.C.
Deposit date:2022-08-26
Release date:2022-11-02
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.18 Å)
Cite:Computational remodeling of an enzyme conformational landscape for altered substrate selectivity.
Nat Commun, 14, 2023
5NEJ
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BU of 5nej by Molmil
CryoEM Structure of Foot and Mouth Disease Virus O1 Manisa
Descriptor: O1 Manisa VP1, O1 Manisa VP2, O1 Manisa VP3
Authors:Kotecha, A, Stuart, D.
Deposit date:2017-03-10
Release date:2017-06-21
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Rules of engagement between alpha v beta 6 integrin and foot-and-mouth disease virus.
Nat Commun, 8, 2017
8GBI
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BU of 8gbi by Molmil
Porous framework formed by assembly of a bipyridyl-conjugated helical peptide
Descriptor: 5'-(hydrazinecarbonyl)[2,2'-bipyridine]-5-carboxamide, ACETONITRILE, LEU-(AIB)-ALA-CYS-LEU-CYS-CYS-(AIB)-LEU, ...
Authors:Hess, S.S, Nguyen, A.I.
Deposit date:2023-02-26
Release date:2023-11-15
Method:X-RAY DIFFRACTION (0.95 Å)
Cite:Noncovalent Peptide Assembly Enables Crystalline, Permutable, and Reactive Thiol Frameworks.
J.Am.Chem.Soc., 145, 2023
6UNA
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BU of 6una by Molmil
Crystal structure of inactive p38gamma
Descriptor: GLYCEROL, Mitogen-activated protein kinase 12, SULFATE ION
Authors:Aoto, P.C, Stanfield, R.L, Wilson, I.A, Dyson, H.J, Wright, P.E.
Deposit date:2019-10-11
Release date:2019-12-18
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.554 Å)
Cite:A Dynamic Switch in Inactive p38 gamma Leads to an Excited State on the Pathway to an Active Kinase.
Biochemistry, 58, 2019
8GL0
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BU of 8gl0 by Molmil
Porous framework formed by assembly of a bipyridyl-conjugated helical peptide
Descriptor: 5'-(hydrazinecarbonyl)[2,2'-bipyridine]-5-carboxamide, ACETONITRILE, LEU-AIB-ALA-CYS-LEU-CYS-GLN-AIB-LEU, ...
Authors:Hess, S.S, Nguyen, A.I.
Deposit date:2023-03-20
Release date:2023-11-15
Method:X-RAY DIFFRACTION (1.02 Å)
Cite:Noncovalent Peptide Assembly Enables Crystalline, Permutable, and Reactive Thiol Frameworks.
J.Am.Chem.Soc., 145, 2023

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PDB entries from 2024-09-04

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