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PDB: 4 results

3R8F
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BU of 3r8f by Molmil
Replication initiator DnaA bound to AMPPCP and single-stranded DNA
Descriptor: 5'-D(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3', Chromosomal replication initiator protein dnaA, MAGNESIUM ION, ...
Authors:Duderstadt, K.E, Chuang, K, Berger, J.M.
Deposit date:2011-03-23
Release date:2011-09-28
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3.366 Å)
Cite:DNA stretching by bacterial initiators promotes replication origin opening.
Nature, 478, 2011
3KML
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BU of 3kml by Molmil
Circular Permutant of the Tobacco Mosaic Virus
Descriptor: Coat protein
Authors:Duderstadt, K.E, Dedeo, M.T, Francis, M.B, Berger, J.M.
Deposit date:2009-11-10
Release date:2010-02-16
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3.011 Å)
Cite:Nanoscale protein assemblies from a circular permutant of the tobacco mosaic virus.
Nano Lett., 10, 2010
8PKI
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BU of 8pki by Molmil
Cryo-EM structure of NR5A2-nucleosome complex SHL+5.5
Descriptor: DNA, Histone H2A, Histone H2B type 1-C/E/G, ...
Authors:Kobayashi, W, Sappler, A, Bollschweiler, D, Kummecke, M, Basquin, J, Arslantas, E, Ruangroengkulrith, S, Hornberger, R, Duderstadt, K, Tachibana, K.
Deposit date:2023-06-26
Release date:2024-02-28
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (2.58 Å)
Cite:Nucleosome-bound NR5A2 structure reveals pioneer factor mechanism by DNA minor groove anchor competition.
Nat.Struct.Mol.Biol., 2024
8PKJ
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BU of 8pkj by Molmil
Cryo-EM structure of the nucleosome containing Nr5a2 motif at SHL+5.5
Descriptor: DNA, Histone H2A, Histone H2B, ...
Authors:Kobayashi, W, Sappler, A, Bollschweiler, D, Kummecke, M, Basquin, J, Arslantas, E, Ruangroengkulrith, S, Hornberger, R, Duderstadt, K, Tachibana, K.
Deposit date:2023-06-26
Release date:2024-02-28
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (2.5 Å)
Cite:Nucleosome-bound NR5A2 structure reveals pioneer factor mechanism by DNA minor groove anchor competition.
Nat.Struct.Mol.Biol., 2024

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