[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 207 items for (author: zhang & dj)

EMDB-47570:
DH726-1 Fab bound to hemagglutinin from influenza A/Solomon Islands/3/2006
Method: single particle / : Finney J, Harrison SC, Walsh Jr RM, Kelsoe G

EMDB-49911:
LmuA_conformation 1
Method: single particle / : Chakravarti A, Zhang Z

EMDB-49915:
LmuA_conformation 2_assymetric
Method: single particle / : Chakravarti A, Zhang Z

EMDB-49922:
LmuABC_apo
Method: single particle / : Chakravarti A, Zhang Z

EMDB-49934:
LmuABC-DNA
Method: single particle / : Chakravarti A, Zhang Z

EMDB-48556:
Cryo-EM structure of KwaA tetramer with C2 symmetry
Method: single particle / : Zhang Z, Patel DJ

EMDB-48215:
Global structure of hCXCR4 and HIV-2 gp120
Method: single particle / : Zhang Z, Patel DJ

EMDB-48220:
CXCR4 tetramer bound to 4 CXCL12 dimers
Method: single particle / : Zhang Z, Patel DJ

EMDB-48182:
hCXCR4-CXCL12 complex with 1:1 stoichiometry
Method: single particle / : Zhang Z, Patel DJ

EMDB-48180:
human CXCR4 tetramer
Method: single particle / : Zhang Z, Patel DJ, Junyu X

EMDB-48219:
CXCR4-HIV-2/gp120-CD4
Method: single particle / : Zhang Z, Patel DJ

EMDB-48218:
cryoEM structure of hCXCR4 tetramer bound to HIV-2/gp120/V3 loop
Method: single particle / : Zhang Z, Patel DJ

EMDB-49973:
Cryo-EM structure of Local KwaA-KwaB complex
Method: single particle / : Zhang Z, Patel DJ

EMDB-48562:
Cryo-EM structure of KwaA with C4 symmetry
Method: single particle / : Zhang Z, Patel DJ

EMDB-48564:
Cryo-EM structure of KwaA-KwaB complex
Method: single particle / : Zhang Z, Patel DJ

EMDB-48798:
PP2A-B55 Holoenzyme with Eya3
Method: single particle / : Shi S, Alderman C, Huang W, Zhao R

EMDB-48799:
PP2A-B55 Holoenzyme with B55i
Method: single particle / : Shi S, Alderman C, Huang W, Zhao R

EMDB-46047:
HIV Env JRFL NFL TD CC3+ trimer in complex with NHP #1 polyclonal Fab (gp120 interface, gp41-FP, gp41-base epitopes)
Method: single particle / : Sewall LM, Ozorowski G, Ward AB

EMDB-46048:
HIV Env ZM233 NFL TD CC3+ trimer in complex with NHP #1,2,3,4 polyclonal Fab (gp41-FP, gp41-base epitopes)
Method: single particle / : Sewall LM, Ozorowski G, Ward AB

EMDB-48283:
61-12A01 Fab in complex with HIV-1 GT1.1 v4.1 SOSIP Env trimer and RM20A3 Fab
Method: single particle / : Phulera S, Ozorowski G, Ward AB

EMDB-48286:
206-3G08 Fab in complex with HIV-1 GT1.1 v4.1 SOSIP Env trimer and RM20A3 Fab
Method: single particle / : Phulera S, Ozorowski G, Ward AB

EMDB-48287:
206-9C09 Fab in complex with HIV-1 GT1.1 v4.1 SOSIP Env trimer and RM20A3 Fab
Method: single particle / : Phulera S, Ozorowski G, Ward AB

EMDB-48290:
273-4D01 Fab in complex with HIV-1 BG505 SOSIP Env trimer and RM20A3 Fab
Method: single particle / : Phulera S, Ozorowski G, Ward AB

EMDB-48291:
253-7A03 Fab in complex with HIV-1 BG505 SOSIP Env trimer and RM20A3 Fab
Method: single particle / : Phulera S, Ozorowski G, Ward AB

EMDB-70490:
BG505 GT1.1 SOSIP in complex with gp41-base epitope polyclonal antibodies isolated from a participant in the IAVI C101 clinical trial
Method: single particle / : Ozorowski G, Ward AB

EMDB-70491:
BG505 GT1.1 SOSIP in complex with V1V2V3 epitope polyclonal antibodies isolated from a participant in the IAVI C101 clinical trial
Method: single particle / : Ozorowski G, Ward AB

EMDB-70492:
BG505 GT1.1 SOSIP in complex with C3V5 epitope polyclonal antibodies isolated from a participant in the IAVI C101 clinical trial
Method: single particle / : Ozorowski G, Ward AB

EMDB-70493:
BG505 GT1.1 SOSIP in complex with CD4bs epitope polyclonal antibodies isolated from a participant in the IAVI C101 clinical trial
Method: single particle / : Ozorowski G, Ward AB

EMDB-70494:
BG505 GT1.1 SOSIP in complex with gp41 glycan hole epitope polyclonal antibodies isolated from a participant in the IAVI C101 clinical trial
Method: single particle / : Ozorowski G, Ward AB

EMDB-70495:
BG505 GT1.1 SOSIP in complex with gp41 fusion peptide epitope polyclonal antibodies isolated from a participant in the IAVI C101 clinical trial
Method: single particle / : Ozorowski G, Ward AB

EMDB-45928:
LJF-085 Fab in complex with HIV Env JRFL NFL TD CC3+ trimer and 35O22 Fab
Method: single particle / : Ozorowski G, Ward AB

EMDB-45929:
LJF-034 Fab in complex with HIV Env JRFL NFL TD CC3+ trimer and 35O22 Fab
Method: single particle / : Ozorowski G, Ward AB

EMDB-45957:
LJF-085 Fab in complex with HIV Env ZM233 NFL TD CC3+ trimer
Method: single particle / : Ozorowski G, Ward AB

EMDB-45978:
LJF-085 Fab in complex with HIV Env ZM233 NFL TD CC3+ dimer and 35O22 Fab
Method: single particle / : Ozorowski G, Ward AB

EMDB-49523:
Cryo-EM structure of hexameric SenDRT9 RT-ncRNA complex
Method: single particle / : Burman N, Pandey S, Wiedenheft B, Sternberg SH

EMDB-49525:
Cryo-EM structure of the trimeric SenDRT9 RT-ncRNA complex (GST fusion)
Method: single particle / : Burman N, Pandey S, Wiedenheft B, Sternberg SH

EMDB-46715:
MERS NTD-specific polyclonal antibodies
Method: single particle / : Ward AB, Bangaru S

EMDB-42954:
ACAD11 D220A with 4-hydroxyvaleryl-CoA
Method: single particle / : Zhang J, Bartlett A, Rashan E, Yuan P, Pagliarini D

EMDB-42955:
ACAD11 D753N with 4-phosphovaleryl-CoA
Method: single particle / : Zhang J, Bartlett A, Rashan E, Yuan P, Pagliarini D

EMDB-43795:
CryoEM structure of AMETA-A3
Method: single particle / : Huang W, Sang Z, Taylor D

EMDB-51543:
Tn7016 PseCAST QCascade
Method: single particle / : Lampe GD, Liang AR, Zhang DJ, Fernandez IS, Sternberg SH

EMDB-41346:
CRYO-EM STRUCTURE OF HIV-1 BG505DS-SOSIP.664 ENV TRIMER BOUND TO DJ85-b.01 FAB
Method: single particle / : Pletnev S, Hoyt F, Fischer E, Kwong P

EMDB-41359:
CRYO-EM STRUCTURE OF HIV-1 BG505DS-SOSIP.664 ENV TRIMER BOUND TO DJ85-c.01 FAB
Method: single particle / : Pletnev S, Hoyt F, Fischer E, Kwong P

EMDB-41360:
CRYO-EM STRUCTURE OF HIV-1 BG505DS-SOSIP.664 ENV TRIMER BOUND TO DJ85-d.01 FAB
Method: single particle / : Pletnev S, Hoyt F, Fischer E, Kwong P

EMDB-41361:
CRYO-EM STRUCTURE OF HIV-1 BG505DS-SOSIP.664 ENV TRIMER BOUND TO DJ85-e.01 FAB
Method: single particle / : Pletnev S, Hoyt F, Fischer E, Kwong P

EMDB-41362:
CRYO-EM STRUCTURE OF HIV-1 BG505DS-SOSIP.664 ENV TRIMER BOUND TO HERH-c.01 FAB
Method: single particle / : Pletnev S, Hoyt F, Fischer E, Kwong P

EMDB-41770:
Apo form of human ATE1
Method: single particle / : Huang W, Zhang Y, Taylor DJ

EMDB-42071:
human ATE1 in complex with Arg-tRNA and a peptide substrate
Method: single particle / : Huang W, Zhang Y, Taylor DJ

EMDB-41426:
Cryo-EM structure of TRNM-b*01 Fab in complex with HIV-1 Env trimer BG505.DS SOSIP
Method: single particle / : Roark RS, Morano NC, Shapiro LS, Kwong PD

EMDB-41438:
Cryo-EM structure of HERH-b*01 Fab in complex with HIV-1 Env trimer BG505.DS SOSIP
Method: single particle / : Roark RS, Hoyt F, Hansen B, Fischer E, Shapiro LS, Kwong PD

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more