[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 910 items for (author: li & yc)

EMDB-60663:
SARS-CoV-2 E-RTC bound to pRNA-nsp9 and GDP-BeF3-
Method: single particle / : Yan LM, Huang YC, Liu YX, Rao ZH, Lou ZY

EMDB-64175:
SARS-CoV-2 E-RTC in complex with RNA-nsp9 and GMPPNP
Method: single particle / : Huang YC, Liu YX, Lou ZY, Rao ZH, Yan LM

EMDB-45428:
MicroED structure of the human MP20 protein
Method: electron crystallography / : Nicolas WJ, Shiriaeva A, Martynowycz MW, Grey AC, Ruma Y, Donaldson PJ, Gonen T

PDB-9cbv:
MicroED structure of the human MP20 protein
Method: electron crystallography / : Nicolas WJ, Shiriaeva A, Martynowycz MW, Grey AC, Ruma Y, Donaldson PJ, Gonen T

EMDB-60092:
vibrio parahaemolyticus transcription factor ApHB
Method: single particle / : Wang HC, Chang YC, Lin SJ, Huang HJ

EMDB-44139:
Structure of a complex between Pasteurella multocida surface lipoprotein, PmSLP-1, and bovine complement factor I
Method: single particle / : Nguyen QH, Norris MJ, Moraes TF

PDB-9b3h:
Structure of a complex between Pasteurella multocida surface lipoprotein, PmSLP-1, and bovine complement factor I
Method: single particle / : Nguyen QH, Norris MJ, Moraes TF

EMDB-50108:
Medium-resolution cryo-EM structure of the Danio rerio tRNA ligase complex
Method: single particle / : Chamera S, Zajko W, Czarnocki-Cieciura M, Jaciuk M, Koziej L, Nowak J, Wycisk K, Sroka M, Chramec-Glabik A, Smietanski M, Golebiowski F, Warminski M, Jemielity J, Glatt S, Nowotny M

EMDB-52744:
Cryo-EM structure of the Danio rerio tRNA ligase complex
Method: single particle / : Chamera S, Zajko W, Czarnocki-Cieciura M, Jaciuk M, Koziej L, Nowak J, Wycisk K, Sroka M, Chramiec-Glabik A, Smietanski M, Golebiowski F, Warminski M, Jemielity J, Glatt S, Nowotny M

PDB-9i8v:
Cryo-EM structure of the Danio rerio tRNA ligase complex
Method: single particle / : Chamera S, Zajko W, Czarnocki-Cieciura M, Jaciuk M, Koziej L, Nowak J, Wycisk K, Sroka M, Chramiec-Glabik A, Smietanski M, Golebiowski F, Warminski M, Jemielity J, Glatt S, Nowotny M

EMDB-44146:
Conformation 1 of the assembled dimer of PmSLP-1:FI complex
Method: single particle / : Nguyen QH, Norris MJ, Moraes TF

EMDB-44149:
Conformation 2 of the assembled dimer of PmSLP-1:FI complex
Method: single particle / : Nguyen QH, Norris MJ, Moraes TF

EMDB-62692:
SARS-CoV-2 C-RTC with 13-TP
Method: single particle / : Huang YC, Liang L, Liu YX, Yan LM, Lou ZY, Rao ZH

EMDB-62368:
Cryo-EM map of human PNPase in open form
Method: single particle / : Li YC, Yuan HS

EMDB-62369:
Focused refinement map of human PNPase in open form
Method: single particle / : Li YC, Yuan HS

EMDB-62370:
Focused refinement map of human PNPase in open form
Method: single particle / : Li YC, Yuan HS

EMDB-62371:
Focused refinement map of human PNPase in open form
Method: single particle / : Li YC, Yuan HS

EMDB-62372:
Composite map of human PNPase in open form
Method: single particle / : Li YC, Yuan HS

EMDB-62373:
Cryo-EM map of human PNPase in closed form
Method: single particle / : Li YC, Yuan HS

EMDB-62374:
Focused refinement map of human PNPase in closed form
Method: single particle / : Li YC, Yuan HS

EMDB-62375:
Focused refinement map of human PNPase in closed form
Method: single particle / : Li YC, Yuan HS

EMDB-62376:
Focused refinement map of human PNPase in closed form
Method: single particle / : Li YC, Yuan HS

EMDB-48323:
Structure of the IFIT2-IFIT3 heterodimer from Mus musculus
Method: single particle / : Glasner DR, Todd C, Cook BD, DUrso A, Khosla S, Estrada E, Wagner J, Bartels MD, Ford P, Prych J, Hatch K, Yee BA, Ego KM, Liang Q, Holland SR, Case JB, Corbett KD, Diamond MS, Yeo GW, Herzik Jr MA, Van Nostrand EL, Daugherty MD

PDB-9mk9:
Structure of the IFIT2-IFIT3 heterodimer from Mus musculus
Method: single particle / : Glasner DR, Todd C, Cook BD, DUrso A, Khosla S, Estrada E, Wagner J, Bartels MD, Ford P, Prych J, Hatch K, Yee BA, Ego KM, Liang Q, Holland SR, Case JB, Corbett KD, Diamond MS, Yeo GW, Herzik Jr MA, Van Nostrand EL, Daugherty MD

EMDB-43745:
SARS-CoV-2 M protein dimer in complex with JNJ-9676 and Fab-B
Method: single particle / : Yin Y, Van Damme E

PDB-8w2e:
SARS-CoV-2 M protein dimer in complex with JNJ-9676 and Fab-B
Method: single particle / : Yin Y, Van Damme E

EMDB-38201:
Cryo-EM structure of SARS-CoV-2 S-BQ.1 in complex with ACE2
Method: single particle / : Hsu HF, Wu MH, Chang YC, Hsu STD

EMDB-45050:
Structure of an STK19-containing TC-NER complex
Method: single particle / : Mevissen TET, Kuemmecke M, Farnung L, Walter JC

PDB-9bz0:
Structure of an STK19-containing TC-NER complex
Method: single particle / : Mevissen TET, Kuemmecke M, Farnung L, Walter JC

EMDB-46049:
Cryo-EM structure of MRV outer shell
Method: single particle / : Liu XY, Xia X, Martynowycz MW, Gonen T, Zhou ZH

EMDB-46053:
Cryo-EM structure of MRV full core
Method: single particle / : Liu XY, Xia X, Martynowycz MW, Gonen T, Zhou ZH

EMDB-46054:
Cryo-EM structure of MRV virion
Method: single particle / : Liu XY, Xia X, Martynowycz MW, Gonen T, Zhou ZH

EMDB-47313:
Subtomogram averaging of MRV core from 6 h post infection
Method: subtomogram averaging / : Liu XY, Xia X, Martynowycz MW, Gonen T, Zhou ZH

EMDB-47314:
Subtomogram averaging for MRV empty core from 6 h post infection
Method: subtomogram averaging / : Liu XY, Xia X, Martynowycz MW, Gonen T, Zhou ZH

EMDB-47315:
Subtomogram averaging of MRV star core from cells 48 h post infection
Method: subtomogram averaging / : Liu XY, Xia X, Martynowycz MW, Gonen T, Zhou ZH

EMDB-47316:
Subtomogram averaging of MRV virion from cells 48 h post infection
Method: subtomogram averaging / : Liu XY, Xia X, Martynowycz MW, Gonen T, Zhou ZH

EMDB-47317:
Subtomogram averaging of MRV virion vertex
Method: subtomogram averaging / : Liu XY, Xia X, Martynowycz MW, Gonen T, Zhou ZH

EMDB-47318:
Subtomogram averaging of MRV empty virion from cells 48 h post infection
Method: subtomogram averaging / : Liu XY, Xia X, Martynowycz MW, Gonen T, Zhou ZH

EMDB-47319:
Subtomogram averaging of MRV outer shell from cells 48 h post infection
Method: subtomogram averaging / : Liu XY, Xia X, Martynowycz MW, Gonen T, Zhou ZH

EMDB-47320:
CryoEM structure of MRV empty virion 48 h post infection
Method: single particle / : Liu XY, Xia X, Martynowycz MW, Gonen T, Zhou ZH

EMDB-47321:
CryoEM structure of MRV empty core without turret attached
Method: single particle / : Liu XY, Xia X, Martynowycz MW, Gonen T, Zhou ZH

EMDB-47322:
CryoEM structure of MRV empty core with turret attached
Method: single particle / : Liu XY, Xia X, Martynowycz MW, Gonen T, Zhou ZH

PDB-9cyt:
Cryo-EM structure of MRV outer shell
Method: single particle / : Liu XY, Xia X, Martynowycz MW, Gonen T, Zhou ZH

PDB-9cyx:
Cryo-EM structure of MRV full core
Method: single particle / : Liu XY, Xia X, Martynowycz MW, Gonen T, Zhou ZH

PDB-9cyy:
Cryo-EM structure of MRV virion
Method: single particle / : Liu XY, Xia X, Martynowycz MW, Gonen T, Zhou ZH

EMDB-36571:
Cryo EM map of full length PLC gamma 2
Method: single particle / : Shin YC, Liao M

EMDB-36572:
Cryo EM map of full length PLC gamma 2 in autoinhibition state
Method: single particle / : Shin YC, Liao M

EMDB-36573:
Cryo EM map of full length PLC gamma 2 and FGFR1 Kinase Domain
Method: single particle / : Shin YC, Liao M

EMDB-47261:
Cryo-EM reconstruction of TC-NER transcription elongation complex with STK19 (map IV)
Method: single particle / : Mevissen TET, Kuemmecke M, Farnung L, Walter JC

EMDB-47262:
Cryo-EM reconstruction of TC-NER transcription elongation complex with STK19 (map III)
Method: single particle / : Mevissen TET, Kuemmecke M, Farnung L, Walter JC

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more