[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 3,283 items for (author: an & my)

EMDB-72409:
Metabotropic Glutamate Receptor 7 in complex with ecto-domain of Extracellular Leucine Rich Repeat and Fibronectin Type III Domain Containing 2
Method: single particle / : Ludlam WG, Chang CT, Liauw BW, Cho HJ, Sawh-Gopal A, Izard T, Bao H, Dunn HA, Vafabakhsh R, Martemyanov KA

PDB-9y2f:
Metabotropic Glutamate Receptor 7 in complex with ecto-domain of Extracellular Leucine Rich Repeat and Fibronectin Type III Domain Containing 2
Method: single particle / : Ludlam WG, Chang CT, Liauw BW, Cho HJ, Sawh-Gopal A, Izard T, Bao H, Dunn HA, Vafabakhsh R, Martemyanov KA

EMDB-77477:
apo-bmCCAN consensus refinement
Method: single particle / : Yatskevich S, Ciferri C

EMDB-75979:
Cryo-EM structure of human exportin-1 conjugated with FR-027*
Method: single particle / : Wing CE, Fung HYJ, Chook YM

EMDB-48061:
Octopus ribosome, hybrid 80S
Method: single particle / : Gao J, Yip MCJ, Han R, Grearson A, Shao S, Lee ASY

PDB-9eho:
Octopus ribosome, hybrid 80S
Method: single particle / : Gao J, Yip MCJ, Han R, Grearson A, Shao S, Lee ASY

EMDB-65226:
Cryo-EM Structure of GPR158 in Complex with RGS7-Gbeta5 and Nanobody Nb20
Method: single particle / : Laboute T, Zucca S, Sial M, Sharma M, Brunori G, Singh S, Singh A, Martemyanov K

PDB-9vos:
Cryo-EM Structure of GPR158 in Complex with RGS7-Gbeta5 and Nanobody Nb20
Method: single particle / : Laboute T, Zucca S, Sial M, Sharma M, Brunori G, Singh S, Singh A, Martemyanov K

EMDB-76463:
Locally refined cryo-EM structure of human cannabinoid receptor 2 with agonist '5249
Method: single particle / : Sacco M, Wu C, Singal B, Skiniotis G

EMDB-76464:
Cryo-EM structure of human cannabinoid receptor 2-Gi complex with agonist '5249
Method: single particle / : Sacco M, Wu C, Singal B, Skiniotis G

EMDB-76465:
Cryo-EM structure of human cannabinoid receptor 2-Gi complex with agonist '1029
Method: single particle / : Sacco M, Wu C, Singal B, Skiniotis G

PDB-12iy:
Locally refined cryo-EM structure of human cannabinoid receptor 2 with agonist '5249
Method: single particle / : Sacco M, Wu C, Singal B, Skiniotis G

PDB-12iz:
Cryo-EM structure of human cannabinoid receptor 2-Gi complex with agonist '5249
Method: single particle / : Sacco M, Wu C, Singal B, Skiniotis G

PDB-12ja:
Cryo-EM structure of human cannabinoid receptor 2-Gi complex with agonist '1029
Method: single particle / : Sacco M, Wu C, Singal B, Skiniotis G

EMDB-48827:
hM4Di(GRANPA) in complex with mGsI and diphenhydramine
Method: single particle / : Mobbs JI, Thal DM

EMDB-48828:
Focused refinement map of hM4Di(GRANPA) in complex with mGsI and diphenhydramine
Method: single particle / : Mobbs JI, Thal DM

PDB-9n29:
hM4Di(GRANPA) in complex with mGsI and diphenhydramine
Method: single particle / : Mobbs JI, Thal DM

EMDB-77085:
Characterization standard for in-situ cryo-electron tomography: structure of PP7 virus-like-particle in E. coli from plunge freezing (full dataset)
Method: subtomogram averaging / : Ali M, Hutchings J, Montabana EA, Schwartz J, Kopylov M, Paraan M

EMDB-77086:
Characterization standard for in-situ cryo-electron tomography: structure of PP7 virus-like-particle in E. coli from high-pressure freezing and FIB-milling (full dataset)
Method: subtomogram averaging / : Ali M, Hutchings J, Montabana EA, Schwartz J, Kopylov M, Paraan M

EMDB-77087:
Characterization standard for in-situ cryo-electron tomography: structure of PP7 virus-like-particle in E. coli from plunge freezing (partial dataset)
Method: subtomogram averaging / : Ali M, Hutchings J, Montabana EA, Schwartz J, Kopylov M, Paraan M

EMDB-77088:
Characterization standard for in-situ cryo-electron tomography: structure of PP7 virus-like-particle in E. coli from high-pressure freezing and FIB-milling (partial dataset)
Method: subtomogram averaging / : Ali M, Hutchings J, Montabana EA, Schwartz J, Kopylov M, Paraan M

EMDB-56861:
In situ ribosome from HeLa cells
Method: subtomogram averaging / : Gemin O, Babenko A, Papp G

EMDB-70561:
Structure of the Bombyx mori bmCENP-HIKM-LN-T-OP complex without the CS module
Method: single particle / : Yatskevich S, Ciferri C

EMDB-70567:
Bombyx mori bmCENP-LN-HIKM sub-complex structure
Method: single particle / : Yatskevich S, Ciferri C

PDB-9oke:
Structure of the Bombyx mori bmCENP-HIKM-LN-T-OP complex without the CS module
Method: single particle / : Yatskevich S, Ciferri C

PDB-9okk:
Bombyx mori bmCENP-LN-HIKM sub-complex structure
Method: single particle / : Yatskevich S, Ciferri C

EMDB-77092:
Characterization standard for in-situ cryo-electron tomography: structure of PP7 virus-like-particle in E. coli from plunge freezing by single particle analysis
Method: single particle / : Kopylov M, Ali M, Montabana EA, Paraan M

EMDB-76790:
Rabbit Aldolase, Laser Phase Plate TEM, Laser-ON dataset 1 (A1)
Method: single particle / : Petrov PN, Zhang JT, Remis JP, Axelrod JJ, Cheng H, Cooper E, Hicklin IK, Sandhaus S, Schnurr C, Glaeser RM, Mueller HM

EMDB-76791:
Rabbit Aldolase, Laser Phase Plate TEM, Laser-OFF dataset 1 (A1)
Method: single particle / : Petrov PN, Zhang JT, Remis JP, Axelrod JJ, Cheng H, Cooper E, Hicklin IK, Sandhaus S, Schnurr C, Glaeser RM, Mueller HM

EMDB-76792:
Rabbit Aldolase, Laser Phase Plate TEM, Laser-ON dataset 2 (A2)
Method: single particle / : Petrov PN, Zhang JT, Remis JP, Axelrod JJ, Cheng H, Cooper E, Hicklin IK, Sandhaus S, Schnurr C, Glaeser RM, Mueller HM

EMDB-76793:
Rabbit Aldolase, Laser Phase Plate TEM, Laser-OFF dataset 2 (A2)
Method: single particle / : Petrov PN, Zhang JT, Remis JP, Axelrod JJ, Cheng H, Cooper E, Hicklin IK, Sandhaus S, Schnurr C, Glaeser RM, Mueller HM

EMDB-76794:
Rabbit Aldolase, Laser Phase Plate TEM, Laser-ON dataset 3 (A3)
Method: single particle / : Petrov PN, Zhang JT, Remis JP, Axelrod JJ, Cheng H, Cooper E, Hicklin IK, Sandhaus S, Schnurr C, Glaeser RM, Mueller HM

EMDB-76797:
Rabbit Aldolase, Laser Phase Plate TEM, Laser-OFF dataset 3 (A3)
Method: single particle / : Petrov PN, Zhang JT, Remis JP, Axelrod JJ, Cheng H, Cooper E, Hicklin IK, Sandhaus S, Schnurr C, Glaeser RM, Mueller HM

EMDB-76802:
Human Hemoglobin, Laser Phase Plate TEM, Laser-ON dataset 1 (H1)
Method: single particle / : Petrov PN, Zhang JT, Remis JP, Axelrod JJ, Cheng H, Cooper E, Hicklin IK, Sandhaus S, Schnurr C, Glaeser RM, Mueller HM

EMDB-76804:
Human Hemoglobin, Laser Phase Plate TEM, Laser-OFF dataset 1 (H1)
Method: single particle / : Petrov PN, Zhang JT, Remis JP, Axelrod JJ, Cheng H, Cooper E, Hicklin IK, Sandhaus S, Schnurr C, Glaeser RM, Mueller HM

EMDB-76805:
Human Hemoglobin, Laser Phase Plate TEM, Laser-ON dataset 2 (H2)
Method: single particle / : Petrov PN, Zhang JT, Remis JP, Axelrod JJ, Cheng H, Cooper E, Hicklin IK, Sandhaus S, Schnurr C, Glaeser RM, Mueller HM

EMDB-76806:
Human Hemoglobin, Laser Phase Plate TEM, Laser-OFF dataset 2 (H2)
Method: single particle / : Petrov PN, Zhang JT, Remis JP, Axelrod JJ, Cheng H, Cooper E, Hicklin IK, Sandhaus S, Schnurr C, Glaeser RM, Mueller HM

EMDB-76807:
Human Hemoglobin, Laser Phase Plate TEM, Laser-ON dataset 3 (H3)
Method: single particle / : Petrov PN, Zhang JT, Remis JP, Axelrod JJ, Cheng H, Cooper E, Hicklin IK, Sandhaus S, Schnurr C, Glaeser RM, Mueller HM

EMDB-76809:
Human Hemoglobin, Laser Phase Plate TEM, Laser-OFF dataset 3 (H3)
Method: single particle / : Petrov PN, Zhang JT, Remis JP, Axelrod JJ, Cheng H, Cooper E, Hicklin IK, Sandhaus S, Schnurr C, Glaeser RM, Mueller HM

EMDB-76810:
Human Hemoglobin, Laser Phase Plate TEM, Laser-ON, Refined initial 3D class (IC-ON)
Method: single particle / : Petrov PN, Zhang JT, Remis JP, Axelrod JJ, Cheng H, Cooper E, Hicklin IK, Sandhaus S, Schnurr C, Glaeser RM, Mueller HM

EMDB-76811:
Human Hemoglobin, Laser Phase Plate TEM, Laser-OFF, Refined initial 3D class (IC-OFF)
Method: single particle / : Petrov PN, Zhang JT, Remis JP, Axelrod JJ, Cheng H, Cooper E, Hicklin IK, Sandhaus S, Schnurr C, Glaeser RM, Mueller HM

EMDB-70558:
Structure of the dimeric Bombyx mori CCAN bound to DNA
Method: single particle / : Yatskevich S, Ciferri C

EMDB-70560:
Structure of the monomeric Bombyx mori CCAN bound to linear DNA
Method: single particle / : Yatskevich S, Ciferri C

EMDB-70568:
Structure of the Bombyx mori apo-bmCCAN
Method: single particle / : Yatskevich S, Ciferri C

PDB-9okb:
Structure of the dimeric Bombyx mori CCAN bound to DNA
Method: single particle / : Yatskevich S, Ciferri C

PDB-9okd:
Structure of the monomeric Bombyx mori CCAN bound to linear DNA
Method: single particle / : Yatskevich S, Ciferri C

PDB-9okl:
Structure of the Bombyx mori apo-bmCCAN
Method: single particle / : Yatskevich S, Ciferri C

EMDB-71994:
Cryo-EM structure of NapA, the periplasmic nitrate reductase from Campylobacter jejuni
Method: single particle / : Thach T, Subramanian R

PDB-9pxt:
Cryo-EM structure of NapA, the periplasmic nitrate reductase from Campylobacter jejuni
Method: single particle / : Thach T, Subramanian R

EMDB-56607:
CryoEM structure of guanidinase from Nitrospira inopinata
Method: single particle / : Prokhorova I, Lecomte L, Papp G, Schreiner C, Djinovic-Carugo K

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more