[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 22,047 items for (author: ho & ch)

EMDB-51514:
Interaction with AK2A links AIFM1 to cellular energy metabolism. The cryo-EM structure of dimeric AIFM1 without any binding partner.
Method: single particle / : Rothemann RA, Pavlenko EA, Gerlich S, Grobushkin P, Mostert S, Stobbe D, Racho J, Stillger K, Lapacz K, Petrungaro C, Dengjel J, Neundorf I, Bano D, Mondal M, Weiss K, Ehninger D, Nguyen THD, Poepsel SP, Riemer J

EMDB-51515:
Interaction with AK2A links AIFM1 to cellular energy metabolism. The cryo-EM structure of dimeric AIFM1 engaged to MIA40.
Method: single particle / : Rothemann RA, Pavlenko EA, Gerlich S, Grobushkin P, Mostert S, Stobbe D, Racho J, Stillger K, Lapacz K, Petrungaro C, Dengjel J, Neundorf I, Bano D, Mondal M, Weiss K, Ehninger D, Nguyen THD, Poepsel SP, Riemer J

EMDB-51516:
Interaction with AK2A links AIFM1 to cellular energy metabolism. The cryo-EM structure of dimeric AIFM1 bound by AK2A.
Method: single particle / : Rothemann RA, Pavlenko EA, Gerlich S, Grobushkin P, Mostert S, Stobbe D, Racho J, Stillger K, Lapacz K, Petrungaro C, Dengjel J, Neundorf I, Bano D, Mondal M, Weiss K, Ehninger D, Nguyen THD, Poepsel SP, Riemer J

PDB-9gqy:
Interaction with AK2A links AIFM1 to cellular energy metabolism. The cryo-EM structure of dimeric AIFM1 without any binding partner.
Method: single particle / : Rothemann RA, Pavlenko EA, Gerlich S, Grobushkin P, Mostert S, Stobbe D, Racho J, Stillger K, Lapacz K, Petrungaro C, Dengjel J, Neundorf I, Bano D, Mondal M, Weiss K, Ehninger D, Nguyen THD, Poepsel SP, Riemer J

PDB-9gqz:
Interaction with AK2A links AIFM1 to cellular energy metabolism. The cryo-EM structure of dimeric AIFM1 engaged to MIA40.
Method: single particle / : Rothemann RA, Pavlenko EA, Gerlich S, Grobushkin P, Mostert S, Stobbe D, Racho J, Stillger K, Lapacz K, Petrungaro C, Dengjel J, Neundorf I, Bano D, Mondal M, Weiss K, Ehninger D, Nguyen THD, Poepsel SP, Riemer J

PDB-9gr0:
Interaction with AK2A links AIFM1 to cellular energy metabolism. The cryo-EM structure of dimeric AIFM1 bound by AK2A.
Method: single particle / : Rothemann RA, Pavlenko EA, Gerlich S, Grobushkin P, Mostert S, Stobbe D, Racho J, Stillger K, Lapacz K, Petrungaro C, Dengjel J, Neundorf I, Bano D, Mondal M, Weiss K, Ehninger D, Nguyen THD, Poepsel SP, Riemer J

EMDB-45636:
CryoEM structure of NC99 hemagglutinin trimer in complex with Fab BB798E 3-C07
Method: single particle / : Li N, Tsybovsky Y, Sangesland M, Kanekiyo M

EMDB-45637:
CryoEM structure of NC99 hemagglutinin trimer in complex with Fab T009 3-E04
Method: single particle / : Li N, Tsybovsky Y, Sangesland M, Kanekiyo M

PDB-9cjy:
CryoEM structure of NC99 hemagglutinin trimer in complex with Fab BB798E 3-C07
Method: single particle / : Li N, Tsybovsky Y, Sangesland M, Kanekiyo M

PDB-9cjz:
CryoEM structure of NC99 hemagglutinin trimer in complex with Fab T009 3-E04
Method: single particle / : Li N, Tsybovsky Y, Sangesland M, Kanekiyo M

EMDB-49124:
Consensus reconstruction of the Dp71L-PP1A-eIF2alpha holophosphatase stabilized by G-actin/DNAseI
Method: single particle / : Reineke LC, Dalwadi U, Croll T, Arthur C, Lee DJ, Frost A, Costa-Mattioli M

EMDB-49162:
Focused refinement of G-actin within the Dp71L-PP1A-eIF2alpha-DNAseI-G-actin complex
Method: single particle / : Dalwadi U, Reineke LC, Lee DJ, Arthur C, Croll T, Frost A, Costa-Mattioli M

EMDB-49163:
Focused refinement of the Dp71L-eIF2alpha-PP1A subcomplex within the holo-phosphatase complex.
Method: single particle / : Dalwadi U, Reineke LC, Lee DJ, Arthur C, Croll T, Frost A, Costa-Mattioli M

EMDB-49164:
Focused refinement of DNAseI within the Dp71L-eIF2alpha-PP1A-Gactin-DNAseI holo-phosphatase complex.
Method: single particle / : Dalwadi U, Reineke LC, Lee DJ, Arthur C, Croll T, Frost A, Costa-Mattioli M

EMDB-49223:
Viral protein DP71L in complex with phosphorylated eIF2alpha (NTD) and protein phosphatase 1A (D64A), stabilized by G-actin/DNAseI
Method: single particle / : Reineke LC, Dalwadi U, Croll T, Arthur C, Lee DJ, Frost A, Costa-Mattioli M

PDB-9nb9:
Viral protein DP71L in complex with phosphorylated eIF2alpha (NTD) and protein phosphatase 1A (D64A), stabilized by G-actin/DNAseI
Method: single particle / : Reineke LC, Dalwadi U, Croll T, Arthur C, Lee DJ, Frost A, Costa-Mattioli M

EMDB-61370:
Cryo-EM structure of the proton-sensing GPCR (GPR4)-Gs protein complex at pH 6.5
Method: single particle / : You C, Xu HE, Jiang Y

EMDB-61371:
Cryo-EM structure of the proton-sensing GPCR (GPR4)-Gq protein complex at pH 7.4
Method: single particle / : Xu HE, You C, Jiang Y

EMDB-61372:
Cryo-EM structure of the proton-sensing GPCR (GPR4)-Gs protein complex at pH 7.4
Method: single particle / : You C, Xu HE, Jiang Y

PDB-9jco:
Cryo-EM structure of the proton-sensing GPCR (GPR4)-Gs protein complex at pH 6.5
Method: single particle / : You C, Xu HE, Jiang Y

PDB-9jcp:
Cryo-EM structure of the proton-sensing GPCR (GPR4)-Gq protein complex at pH 7.4
Method: single particle / : Xu HE, You C, Jiang Y

PDB-9jcq:
Cryo-EM structure of the proton-sensing GPCR (GPR4)-Gs protein complex at pH 7.4
Method: single particle / : You C, Xu HE, Jiang Y

EMDB-63646:
I-shaped amyloid fiber (40) of Tottori (D7N) mutant
Method: helical / : Burton-Smith RN, Murata K

EMDB-63647:
V-shaped amyloid fiber (40) of Tottori (D7N) mutant (type 1)
Method: helical / : Burton-Smith RN, Murata K

EMDB-63648:
V'-shaped short pitch amyloid fiber (40) of Tottori (D7N) mutant
Method: helical / : Burton-Smith RN, Murata K

EMDB-64274:
V-shaped amyloid fiber (40) of Tottori (D7N) mutant (type 2)
Method: helical / : Burton-Smith RN, Murata K

PDB-9m5p:
I-type amyloid fibril (40) of Tottori (D7N) mutant
Method: helical / : Burton-Smith RN, Murata K

PDB-9m5q:
V-type (V1-type) amyloid fibril (40) of Tottori (D7N) mutant
Method: helical / : Burton-Smith RN, Murata K

PDB-9m5r:
ES-type (short pitch) amyloid fibril (40) of Tottori (D7N) mutant
Method: helical / : Burton-Smith RN, Murata K

PDB-9umh:
V-type (V2-type) amyloid fibril (40) of Tottori (D7N) mutant
Method: helical / : Burton-Smith RN, Murata K

EMDB-47554:
Octopus sensory receptor CRT1 bound to Norharmane
Method: single particle / : Jiang H, Hibbs RE

EMDB-47555:
Octopus sensory receptor CRT1 in complex with H3C
Method: single particle / : Jiang H, Hibbs RE

EMDB-47556:
octopus sensory receptor CRT1 bound to Lumichrome
Method: single particle / : Jiang H, Hibbs RE

PDB-9e6b:
Octopus sensory receptor CRT1 bound to Norharmane
Method: single particle / : Jiang H, Hibbs RE

PDB-9e6c:
Octopus sensory receptor CRT1 in complex with H3C
Method: single particle / : Jiang H, Hibbs RE

PDB-9e6d:
octopus sensory receptor CRT1 bound to Lumichrome
Method: single particle / : Jiang H, Hibbs RE

EMDB-48315:
Dodecameric complex of Aedes aegypti RuvBLs1/2 - C1 symmetry
Method: single particle / : Quel NG, Antonio LM, Ramos CHI, Rosa LT

EMDB-18697:
Subtomogram average of Ebola virus nucleocapsid obtained from cryo-FIB milled Ebola virus infected Huh7 cells at 22 hours post infection
Method: subtomogram averaging / : Vallbracht M, Chlanda P

EMDB-60714:
Cryo-EM structure of Mycobacteriophage Douge genome-packed connector-vertex (gp5, gp8, gp9, gp10, gp12, gp13 and gp113
Method: single particle / : Maharana J, Wang CH, Tsai LA, Lowary TL, Ho MC

EMDB-63219:
Cryo-EM structure of human apo inactive GPR4
Method: single particle / : Chen LN, Zhou H, Xi K

PDB-9lmo:
Cryo-EM structure of human apo inactive GPR4
Method: single particle / : Chen LN, Zhou H, Xi K

EMDB-54199:
In-situ structure of inner ring of NPC of CEM T lymphoblast
Method: subtomogram averaging / : Hou Z, Zhang PJ

EMDB-46708:
Molecular basis of pathogenicity of the recently emerged FCoV-23 coronavirus. Complex of fAPN with FCoV-23 RBD
Method: single particle / : Tortorici MA, Veesler D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

EMDB-46709:
Molecular basis of pathogenicity of the recently emerged FCoV-23 coronavirus. FCoV-23 S short
Method: single particle / : Tortorici MA, Veesler D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

EMDB-46710:
Molecular basis of pathogenicity of the recently emerged FCoV-23 coronavirus. FCoV-23 S Do in proximal conformation (local refinement)
Method: single particle / : Tortorici MA, Veesler D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

EMDB-46714:
Molecular basis of pathogenicity of the recently emerged FCoV-23 coronavirus. FCoV-23 S long with Do in swung-out conformation
Method: single particle / : Tortorici MA, Veesler D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

EMDB-46716:
Molecular basis of pathogenicity of the recently emerged FCoV-23 coronavirus. FCoV-23 S long domain 0 in swung-out conformation (local refinement)
Method: single particle / : Tortorici MA, Veesler D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

EMDB-46739:
Molecular basis of pathogenicity of the recently emerged FCoV-23 coronavirus. FCoV-23 S long with Do in mixed conformations (global refinement).
Method: single particle / : Tortorici MA, Veesler D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

EMDB-70089:
Cryo-EM structure of the human SK2-4 chimera/calmodulin channel complex in the Ca2+ bound state
Method: single particle / : Cassell SJ, Khoshouei M, Wilhelm WA, Whicher JR

EMDB-70120:
Cryo-EM structure of the human SK2-4 chimera/calmodulin channel complex in the Ca2+ free state
Method: single particle / : Cassell SJ, Khoshouei M, Wilhelm WA, Whicher JR

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more