[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 24,468 items for (author: ho & ch)

EMDB-45440:
Cryo-EM structure of a designed pyridoxal phosphate (PLP) synthase fused to a designed circumsporozoite protein antigen from Plasmodium falciparum (CSP-P1-CSP and CSP-P2-CSP)
Method: single particle / : Shi D, Ma R, Tang WK, Tolia NH

PDB-9cca:
Cryo-EM structure of a designed pyridoxal phosphate (PLP) synthase fused to a designed circumsporozoite protein antigen from Plasmodium falciparum (CSP-P1-CSP and CSP-P2-CSP)
Method: single particle / : Shi D, Ma R, Tang WK, Tolia NH

EMDB-63452:
Cryo-EM structure of the cytosolic ARMH2-EFCAB9-CATSPERz subcomplex of the mouse CatSpermasome
Method: single particle / : Zhao Q, Lin S, Xu Q, Wu J

PDB-9lwo:
Cryo-EM structure of the cytosolic ARMH2-EFCAB9-CATSPERz subcomplex of the mouse CatSpermasome
Method: single particle / : Zhao Q, Lin S, Xu Q, Wu J

EMDB-73043:
Cryo-EM structure of post-fusion EBV gB in complex with AMMO2 fab
Method: single particle / : Chou CW, McCool RS, McLellan JS

PDB-9yka:
Cryo-EM structure of post-fusion EBV gB in complex with AMMO2 fab
Method: single particle / : Chou CW, McCool RS, McLellan JS

EMDB-70288:
Cryo-EM structure of EBV gB prefusion construct C3-GT
Method: single particle / : McCool RS, McLellan JS

EMDB-51635:
P116 from Mycoplasma pneumoniae in complex with mild growth suppressor monoclonal antibody
Method: single particle / : Vizarraga D, Marcos Silva M, Martin Romero J, Guerra P, Fita I, Pinyol J

PDB-9gvg:
P116 from Mycoplasma pneumoniae in complex with mild growth suppressor monoclonal antibody
Method: single particle / : Vizarraga D, Marcos Silva M, Martin Romero J, Guerra P, Fita I, Pinyol J

EMDB-70557:
Cardiac lambda-6 light chain amyloid AL-224L single protofilament
Method: helical / : Hicks CW, Gursky O, Huda N

PDB-9oka:
Cardiac lambda-6 light chain amyloid AL-224L single protofilament
Method: helical / : Hicks CW, Gursky O, Huda N

EMDB-64077:
Cryo-EM structure of SARS-CoV-2 KP.2 spike RBD in complex with ACE2
Method: single particle / : Jin XH, Sun L

EMDB-64078:
Cryo-EM structure of SARS-CoV-2 KP.2 spike in complex with ACE2
Method: single particle / : Jin XH, Sun L

PDB-9ue6:
Cryo-EM structure of SARS-CoV-2 KP.2 spike RBD in complex with ACE2
Method: single particle / : Jin XH, Sun L

PDB-9ue7:
Cryo-EM structure of SARS-CoV-2 KP.2 spike in complex with ACE2
Method: single particle / : Jin XH, Sun L

EMDB-70449:
Globular domain of monkeypox virus OPG153 (A28) bound to antibody 02M12
Method: single particle / : Rundlet EJ, Zhou L, McLellan JS

EMDB-70450:
Globular domain of monkeypox virus OPG153 (A28) in complex with antibodies 08E11 and 12I12
Method: single particle / : Zhou L, Rundlet EJ, McLellan JS

PDB-9og1:
Globular domain of monkeypox virus OPG153 (A28) bound to antibody 02M12
Method: single particle / : Rundlet EJ, Zhou L, McLellan JS

PDB-9og2:
Globular domain of monkeypox virus OPG153 (A28) in complex with antibodies 08E11 and 12I12
Method: single particle / : Zhou L, Rundlet EJ, McLellan JS

EMDB-71130:
A2AR-BRIL + ZM241385 + PGD2
Method: single particle / : Rao P, Rathinaswamy M, Chan M, Paredes AG, Patel C, Wranik BJ, Powell J, Eaton D, Hicks KJ, Mafi A, Hao Q

EMDB-71131:
A2AR-BRIL in complex with ZM241385
Method: single particle / : Rao P, Rathinaswamy M, Chan M, Paredes AG, Patel C, Wranik BJ, Powell J, Eaton D, Hicks KJ, Mafi A, Hao Q

PDB-9p1s:
A2AR-BRIL in complex with ZM241385 and PGD2
Method: single particle / : Rao P, Rathinaswamy M, Chan M, Paredes AG, Patel C, Wranik BJ, Powell J, Eaton D, Hicks KJ, Mafi A, Hao Q

PDB-9p1t:
A2AR-BRIL in complex with ZM241385
Method: single particle / : Rao P, Rathinaswamy M, Chan M, Paredes AG, Patel C, Wranik BJ, Powell J, Eaton D, Hicks KJ, Mafi A, Hao Q

EMDB-72877:
N4 Empty Particle C6 Tail
Method: single particle / : Bellis NF, Cingolani G

EMDB-72880:
N4 Full Virion Portal
Method: single particle / : Bellis NF, Cingolani G

PDB-9yf5:
N4 Empty Particle C6 Tail
Method: single particle / : Bellis NF, Cingolani G

PDB-9yf8:
N4 Full Virion Portal
Method: single particle / : Bellis NF, Cingolani G

EMDB-63444:
Zebrafish ovum lysosomal peptide:N-glycanase
Method: single particle / : Honda A, Kamada K, Burton-Smith RN, Murata K, Suzuki T

PDB-9lwg:
Zebrafish ovum lysosomal peptide:N-glycanase
Method: single particle / : Honda A, Kamada K, Burton-Smith RN, Murata K, Suzuki T

EMDB-74142:
Structure of an Engineered Sodium/Iodide Symporter (PF-NIS)
Method: single particle / : Llorente-Esteban A, Sabbineni H, Hoffsmith K, Manville RW, Lopez-Gonzalez D, Reyna-Neyra A, Leyva JA, Abbott GW, Bianchet MA, Carrasco N

PDB-9zfl:
Structure of an Engineered Sodium/Iodide Symporter (PF-NIS)
Method: single particle / : Llorente-Esteban A, Sabbineni H, Hoffsmith K, Manville RW, Lopez-Gonzalez D, Reyna-Neyra A, Leyva JA, Abbott GW, Bianchet MA, Carrasco N

EMDB-62518:
Enterovirus B 75
Method: single particle / : Tang L, Cao S, Chen Q, Zhong C, Wang F, Liu Z, Zhang X, Ke C

PDB-9kr4:
Enterovirus B 75
Method: single particle / : Tang L, Cao S, Chen Q, Zhong C, Wang F, Liu Z, Zhang X, Ke C

EMDB-49165:
Cryo-EM structure of the dCas12f-gRNA complex
Method: single particle / : Chang L, Sternberg SH, Xiao R, Hoffmann FT, Wiegand T, Xie D

EMDB-49173:
Cryo-EM structure of the dCas12f-gRNA-DNA complex (partial R-Loop)
Method: single particle / : Chang L, Sternberg SH, Xiao R, Hoffmann FT, Wiegand T, Xie D

EMDB-49174:
Cryo-EM structure of the dCas12f-gRNA-dsDNA complex (full R-Loop)
Method: single particle / : Chang L, Sternberg SH, Xiao R, Hoffmann FT, Wiegand T, Xie D

EMDB-49175:
Cryo-EM structure of the Fta RNAP complex
Method: single particle / : Chang L, Sternberg SH, Xiao R, Hoffmann FT, Wiegand T, Xie D

EMDB-49176:
Cryo-EM structure of the RNA-guided transcription complex
Method: single particle / : Chang L, Sternberg SH, Xiao R, Hoffmann FT, Wiegand T, Xie D

PDB-9n9c:
Cryo-EM structure of the dCas12f-gRNA complex
Method: single particle / : Chang L, Sternberg SH, Xiao R, Hoffmann FT, Wiegand T, Xie D

PDB-9n9m:
Cryo-EM structure of the dCas12f-gRNA-DNA complex (partial R-Loop)
Method: single particle / : Chang L, Sternberg SH, Xiao R, Hoffmann FT, Wiegand T, Xie D

PDB-9n9o:
Cryo-EM structure of the dCas12f-gRNA-dsDNA complex (full R-Loop)
Method: single particle / : Chang L, Sternberg SH, Xiao R, Hoffmann FT, Wiegand T, Xie D

PDB-9n9p:
Cryo-EM structure of the Fta RNAP complex
Method: single particle / : Chang L, Sternberg SH, Xiao R, Hoffmann FT, Wiegand T, Xie D

PDB-9n9q:
Cryo-EM structure of the RNA-guided transcription complex
Method: single particle / : Chang L, Sternberg SH, Xiao R, Hoffmann FT, Wiegand T, Xie D

EMDB-70143:
Cryo-EM structure of human SWELL1-PSA heterocomplex
Method: single particle / : Hagino T, Twomey EC, Qiu Z

PDB-9o5k:
Cryo-EM structure of human SWELL1-PSA heterocomplex
Method: single particle / : Hagino T, Twomey EC, Qiu Z

EMDB-73821:
HECT domain of NEDD4-2 complex with a targeted nanobody, nb.C11
Method: single particle / : Afriyie E, Clarke OB

PDB-9z5q:
HECT domain of NEDD4-2 complex with a targeted nanobody, nb.C11
Method: single particle / : Afriyie E, Clarke OB

EMDB-73458:
Designed antibody vAB66 targeting PAP-HLA A*02:01
Method: single particle / : Jude KM, Garcia KC

EMDB-73460:
TCR mimic antibody vAB-30 in complex with MAGE-A3 in HLA-A1
Method: single particle / : Wang N, Jude KM

PDB-9ytd:
Designed antibody vAB66 targeting PAP-HLA A*02:01
Method: single particle / : Jude KM, Garcia KC

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more