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2K60
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NMR structure of calcium-loaded STIM1 EF-SAM
Descriptor: CALCIUM ION, PROTEIN (Stromal interaction molecule 1)
Authors:Stathopulos, P.B, Ikura, M.
Deposit date:2008-07-02
Release date:2008-10-07
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structural and mechanistic insights into STIM1-mediated initiation of store-operated calcium entry.
Cell(Cambridge,Mass.), 135, 2008
2L5Y
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BU of 2l5y by Molmil
NMR structure of calcium-loaded STIM2 EF-SAM.
Descriptor: CALCIUM ION, Stromal interaction molecule 2
Authors:Zheng, L, Stathopulos, P.B, Ikura, M.
Deposit date:2010-11-09
Release date:2011-01-19
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Auto-inhibitory role of the EF-SAM domain of STIM proteins in store-operated calcium entry.
Proc.Natl.Acad.Sci.USA, 108, 2011
3BS7
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BU of 3bs7 by Molmil
Crystal structure of the Sterile Alpha Motif (SAM) domain of Hyphen/Aveugle
Descriptor: Protein aveugle
Authors:Rajakulendran, T, Sicheri, F.
Deposit date:2007-12-22
Release date:2008-02-26
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:CNK and HYP form a discrete dimer by their SAM domains to mediate RAF kinase signaling.
Proc.Natl.Acad.Sci.USA, 105, 2008
3BQ7
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BU of 3bq7 by Molmil
SAM domain of Diacylglycerol Kinase delta1 (E35G)
Descriptor: Diacylglycerol kinase delta
Authors:Knight, M.J, Bowie, J.U, Sawaya, M.R.
Deposit date:2007-12-19
Release date:2008-03-25
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Regulation of Enzyme Localization by Polymerization: Polymer Formation by the SAM Domain of Diacylglycerol Kinase delta1
Structure, 16, 2008
2B6G
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BU of 2b6g by Molmil
RNA recognition by the Vts1 SAM domain
Descriptor: 5'-R(*GP*GP*AP*GP*GP*CP*UP*CP*UP*GP*GP*CP*AP*GP*CP*UP*UP*UP*C)-3', Vts1p
Authors:Donaldson, L.W, Johnson, P.E.
Deposit date:2005-10-01
Release date:2006-01-24
Last modified:2022-03-09
Method:SOLUTION NMR
Cite:RNA recognition by the Vts1p SAM domain
Nat.Struct.Mol.Biol., 13, 2006
2D3D
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BU of 2d3d by Molmil
crystal structure of the RNA binding SAM domain of saccharomyces cerevisiae Vts1
Descriptor: CALCIUM ION, Vts1 protein
Authors:Aviv, T, Amborski, A.N, Zhao, X.S, Kwan, J.J, Johnson, P.E, Sicheri, F, Donaldson, L.W.
Deposit date:2005-09-27
Release date:2006-02-14
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The NMR and X-ray Structures of the Saccharomyces cerevisiae Vts1 SAM Domain Define a Surface for the Recognition of RNA Hairpins
J.Mol.Biol., 356, 2006
2DKY
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Solution structure of the SAM-domain of Rho-GTPase-activating protein 7
Descriptor: Rho-GTPase-activating protein 7
Authors:Goroncy, A.K, Sato, M, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-04-14
Release date:2007-04-24
Last modified:2022-03-09
Method:SOLUTION NMR
Cite:Solution structure of the SAM-domain of Rho-GTPase-activating protein 7
To be Published
2DL0
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BU of 2dl0 by Molmil
Solution structure of the SAM-domain of the SAM and SH3 domain containing protein 1
Descriptor: SAM and SH3 domain-containing protein 1
Authors:Goroncy, A.K, Sato, M, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-04-14
Release date:2006-10-14
Last modified:2022-03-09
Method:SOLUTION NMR
Cite:Solution structure of the SAM-domain of the SAM and SH3 domain containing protein 1
To be Published
2E8O
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BU of 2e8o by Molmil
Solution structure of the N-terminal SAM-domain of the SAM domain and HD domain containing protein 1 (Dendritic cell-derived IFNG-induced protein) (DCIP) (Monocyte protein 5) (MOP-5)
Descriptor: SAM domain and HD domain-containing protein 1
Authors:Goroncy, A.K, Tochio, N, Koshiba, S, Watanabe, S, Harada, T, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-01-22
Release date:2007-07-24
Last modified:2022-03-09
Method:SOLUTION NMR
Cite:Solution structure of the N-terminal SAM-domain of the SAM domain and HD domain containing protein 1 (Dendritic cell-derived IFNG-induced protein) (DCIP) (Monocyte protein 5) (MOP-5)
To be Published
2EAP
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BU of 2eap by Molmil
Solution structure of the N-terminal SAM-domain of human lymphocyte cytosolic protein 2
Descriptor: Lymphocyte cytosolic protein 2
Authors:Goroncy, A.K, Sato, M, Tochio, N, Koshiba, S, Watanabe, S, Harada, T, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-01-31
Release date:2008-02-05
Last modified:2022-03-09
Method:SOLUTION NMR
Cite:Solution structure of the N-terminal SAM-domain of human lymphocyte cytosolic protein 2
To be Published
2ESE
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BU of 2ese by Molmil
Structure of the SAM domain of Vts1p in complex with RNA
Descriptor: 5'-R(*GP*GP*AP*GP*AP*GP*GP*CP*UP*CP*UP*GP*GP*CP*AP*GP*CP*UP*UP*UP*UP*CP*C)-3', Vts1p
Authors:Allain, F.H.T.
Deposit date:2005-10-26
Release date:2006-01-24
Last modified:2022-03-09
Method:SOLUTION NMR
Cite:Shape-specific recognition in the structure of the Vts1p SAM domain with RNA.
Nat.Struct.Mol.Biol., 13, 2006
2ES6
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BU of 2es6 by Molmil
Structure of the SAM domain of Vts1p
Descriptor: Vts1p
Authors:Allain, F.H.T.
Deposit date:2005-10-25
Release date:2006-01-24
Last modified:2022-03-09
Method:SOLUTION NMR
Cite:Shape-specific recognition in the structure of the Vts1p SAM domain with RNA.
Nat.Struct.Mol.Biol., 13, 2006
2F8K
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BU of 2f8k by Molmil
Sequence specific recognition of RNA hairpins by the SAM domain of Vts1
Descriptor: 5'-R(*UP*AP*AP*UP*CP*UP*UP*UP*GP*AP*CP*AP*GP*AP*UP*U)-3', Protein VTS1
Authors:Aviv, T, Lin, Z, Ben-Ari, G, Smibert, C.A, Sicheri, F.
Deposit date:2005-12-02
Release date:2006-01-24
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Sequence-specific recognition of RNA hairpins by the SAM domain of Vts1p.
Nat.Struct.Mol.Biol., 13, 2006
2FE9
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BU of 2fe9 by Molmil
Solution structure of the Vts1 SAM domain in the presence of RNA
Descriptor: Protein VTS1
Authors:Edwards, T.A, Butterwick, J.A, Palmer, A.G, Aggarwal, A.K.
Deposit date:2005-12-15
Release date:2006-01-24
Last modified:2024-05-08
Method:SOLUTION NMR
Cite:Solution Structure of the Vts1 SAM Domain in the Presence of RNA.
J.Mol.Biol., 356, 2006
2GLE
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BU of 2gle by Molmil
Solution structure of neurabin SAM domain
Descriptor: Neurabin-1
Authors:Ju, T, Hudak, J, Peti, W.
Deposit date:2006-04-04
Release date:2007-03-13
Last modified:2022-03-09
Method:SOLUTION NMR
Cite:Structural characterization of the neurabin SAM domain
TO BE PUBLISHED
2GYT
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BU of 2gyt by Molmil
Solution structure of the SAM (sterile alpha motif) domain of DLC1 (deleted in liver cancer 1)
Descriptor: Deleted in liver cancer 1 protein, isoform 2
Authors:Yang, S.
Deposit date:2006-05-10
Release date:2007-04-24
Last modified:2022-03-09
Method:SOLUTION NMR
Cite:The SAM domain of the RhoGAP DLC1 binds EF1A1 to regulate cell migration
J.Cell.Sci., 122, 2009
2H80
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BU of 2h80 by Molmil
NMR structures of SAM domain of Deleted in Liver Cancer 2 (DLC2)
Descriptor: StAR-related lipid transfer protein 13
Authors:Li, H.Y, Fung, K.L, Jin, D.Y, Chung, S.S, Ko, B.C, Sun, H.Z.
Deposit date:2006-06-06
Release date:2007-05-15
Last modified:2022-03-09
Method:SOLUTION NMR
Cite:Solution structures, dynamics, and lipid-binding of the sterile alpha-motif domain of the deleted in liver cancer 2
Proteins, 67, 2007
4TWN
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BU of 4twn by Molmil
Human EphA3 Kinase domain in complex with Birb796
Descriptor: 1-(5-TERT-BUTYL-2-P-TOLYL-2H-PYRAZOL-3-YL)-3-[4-(2-MORPHOLIN-4-YL-ETHOXY)-NAPHTHALEN-1-YL]-UREA, Ephrin type-A receptor 3
Authors:Dong, J, Caflisch, A.
Deposit date:2014-07-01
Release date:2015-05-13
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.706 Å)
Cite:Structural Analysis of the Binding of Type I, I1/2, and II Inhibitors to Eph Tyrosine Kinases.
Acs Med.Chem.Lett., 6, 2015
7DJT
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BU of 7djt by Molmil
Human SARM1 inhibitory state bounded with inhibitor dHNN
Descriptor: NAD(+) hydrolase SARM1, O3-methyl O5-(2-methylpropyl) 2,6-dimethyl-4-[2-(oxidanylamino)phenyl]pyridine-3,5-dicarboxylate
Authors:Cai, Y, Zhang, H.
Deposit date:2020-11-21
Release date:2021-05-19
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Permeant fluorescent probes visualize the activation of SARM1 and uncover an anti-neurodegenerative drug candidate.
Elife, 10, 2021
7QG0
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BU of 7qg0 by Molmil
Inhibitor-induced hSARM1 duplex
Descriptor: NAD(+) hydrolase SARM1
Authors:Zalk, R, Kahzma, T, Guez-Haddad, J.
Deposit date:2021-12-07
Release date:2022-12-21
Last modified:2023-01-11
Method:ELECTRON MICROSCOPY (4.02 Å)
Cite:A duplex structure of SARM1 octamers stabilized by a new inhibitor.
Cell.Mol.Life Sci., 80, 2022
8GQ5
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BU of 8gq5 by Molmil
Human SARM1 bounded with NMN and Nanobody-C6, double-layer structure
Descriptor: NAD(+) hydrolase SARM1, Nanobody C6
Authors:Cai, Y, Zhang, H.
Deposit date:2022-08-29
Release date:2023-01-18
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:A conformation-specific nanobody targeting the nicotinamide mononucleotide-activated state of SARM1.
Nat Commun, 13, 2022
8GNJ
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Human SARM1 bounded with NMN and Nanobody-C6, Conformation 2
Descriptor: BETA-NICOTINAMIDE RIBOSE MONOPHOSPHATE, NAD(+) hydrolase SARM1, Nanobody-C6
Authors:Cai, Y, Zhang, H.
Deposit date:2022-08-24
Release date:2023-01-18
Method:ELECTRON MICROSCOPY (3.78 Å)
Cite:A conformation-specific nanobody targeting the nicotinamide mononucleotide-activated state of SARM1.
Nat Commun, 13, 2022
8GNI
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BU of 8gni by Molmil
Human SARM1 bounded with NMN and Nanobody-C6, Conformation 1
Descriptor: BETA-NICOTINAMIDE RIBOSE MONOPHOSPHATE, NAD(+) hydrolase SARM1, Nanobody C6
Authors:Cai, Y, Zhang, H.
Deposit date:2022-08-24
Release date:2023-01-18
Method:ELECTRON MICROSCOPY (3.74 Å)
Cite:A conformation-specific nanobody targeting the nicotinamide mononucleotide-activated state of SARM1.
Nat Commun, 13, 2022
8P2L
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BU of 8p2l by Molmil
A CHIMERA construct containing human SARM1 ARM and SAM domains and C. elegans TIR domain.
Descriptor: NAD(+) hydrolase SARM1,NAD(+) hydrolase tir-1, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Isupov, M.N, Opatowsky, Y.
Deposit date:2023-05-16
Release date:2023-09-06
Method:ELECTRON MICROSCOPY (2.68 Å)
Cite:Structure-function analysis of ceTIR-1/hSARM1 explains the lack of Wallerian axonal degeneration in C. elegans.
Cell Rep, 42, 2023
7LD0
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BU of 7ld0 by Molmil
Cryo-EM structure of ligand-free Human SARM1
Descriptor: NAD(+) hydrolase SARM1
Authors:Nanson, J.D, Gu, W, Luo, Z, Jia, X, Landsberg, M.J, Kobe, B, Ve, T.
Deposit date:2021-01-12
Release date:2021-03-10
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:SARM1 is a metabolic sensor activated by an increased NMN/NAD + ratio to trigger axon degeneration.
Neuron, 109, 2021

219869

PDB entries from 2024-05-15

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