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7E8D
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BU of 7e8d by Molmil
NSD2 E1099K mutant bound to nucleosome
分子名称: DNA (185-MER), Histone H2A type 1, Histone H2B type 1-J, ...
著者Sengoku, T, Sato, K, Nishizawa, T, Nureki, O, Ogata, K.
登録日2021-03-01
公開日2021-11-10
最終更新日2022-02-02
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Structural basis of the regulation of the normal and oncogenic methylation of nucleosomal histone H3 Lys36 by NSD2.
Nat Commun, 12, 2021
7LMS
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BU of 7lms by Molmil
Structure of human SetD3 methyl-transferase in complex with 2A protease from Coxsackievirus B3
分子名称: Actin-histidine N-methyltransferase, Protease 2A, S-ADENOSYL-L-HOMOCYSTEINE, ...
著者Verba, K.A, Schulze-Gahmen, U.
登録日2021-02-05
公開日2022-08-10
最終更新日2023-02-22
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Structure-function analysis of enterovirus protease 2A in complex with its essential host factor SETD3.
Nat Commun, 13, 2022
7BJ1
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BU of 7bj1 by Molmil
Crystal structure of SMYD3 with diperodon S enantiomer bound to allosteric site
分子名称: ACETATE ION, Diperodon (S-enantiomer), GLYCEROL, ...
著者Talibov, V.O, Cederfelt, D, Dobritzsch, D, Danielson, U.H.
登録日2021-01-13
公開日2021-03-03
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.61 Å)
主引用文献Discovery of an Allosteric Ligand Binding Site in SMYD3 Lysine Methyltransferase
Chembiochem, 22, 2021
7KSR
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BU of 7ksr by Molmil
PRC2:EZH1_A from a dimeric PRC2 bound to a nucleosome
分子名称: Histone-binding protein RBBP4, Histone-lysine N-methyltransferase EZH1, Polycomb protein EED, ...
著者Grau, D.J, Armache, K.J.
登録日2020-11-24
公開日2021-02-03
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (4.1 Å)
主引用文献Structures of monomeric and dimeric PRC2:EZH1 reveal flexible modules involved in chromatin compaction.
Nat Commun, 12, 2021
7KTP
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BU of 7ktp by Molmil
PRC2:EZH1_B from a dimeric PRC2 bound to a nucleosome
分子名称: Histone-binding protein RBBP4, Histone-lysine N-methyltransferase EZH1, Polycomb protein EED, ...
著者Grau, D.J, Armache, K.J.
登録日2020-11-24
公開日2021-02-03
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (4.8 Å)
主引用文献Structures of monomeric and dimeric PRC2:EZH1 reveal flexible modules involved in chromatin compaction.
Nat Commun, 12, 2021
7KSO
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BU of 7kso by Molmil
Cryo-EM structure of PRC2:EZH1-AEBP2-JARID2
分子名称: Histone-binding protein RBBP4, Histone-lysine N-methyltransferase EZH1, Polycomb protein EED, ...
著者Grau, D.J, Armache, K.J.
登録日2020-11-23
公開日2021-02-03
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Structures of monomeric and dimeric PRC2:EZH1 reveal flexible modules involved in chromatin compaction.
Nat Commun, 12, 2021
7AT8
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BU of 7at8 by Molmil
Histone H3 recognition by nucleosome-bound PRC2 subunit EZH2.
分子名称: Histone H2A, Histone H2B 1.1, Histone H3.2, ...
著者Finogenova, K, Benda, C, Schaefer, I.B, Poepsel, S, Strauss, M, Mueller, J.
登録日2020-10-29
公開日2020-12-09
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (4.4 Å)
主引用文献Structural basis for PRC2 decoding of active histone methylation marks H3K36me2/3.
Elife, 9, 2020
7DCF
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BU of 7dcf by Molmil
Crystal structure of EHMT2 SET domain in complex with compound 10
分子名称: 5'-methoxy-6'-(1-methyl-2,3,4,7-tetrahydroazepin-5-yl)spiro[cyclobutane-1,3'-indole]-2'-amine, Histone-lysine N-methyltransferase EHMT2, S-ADENOSYLMETHIONINE, ...
著者Suzuki, M, Katayama, K.
登録日2020-10-26
公開日2021-02-10
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Discovery of DS79932728: A Potent, Orally Available G9a/GLP Inhibitor for Treating beta-Thalassemia and Sickle Cell Disease.
Acs Med.Chem.Lett., 12, 2021
7D20
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BU of 7d20 by Molmil
Cryo-EM structure of SET8-CENP-A-nucleosome complex
分子名称: DNA (145-MER), Histone H2A type 1-B/E, Histone H2B type 1-J, ...
著者Ho, C.-H, Takizawa, Y, Kobayashi, W, Arimura, Y, Kurumizaka, H.
登録日2020-09-15
公開日2021-02-10
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Structural basis of nucleosomal histone H4 lysine 20 methylation by SET8 methyltransferase.
Life Sci Alliance, 4, 2021
7D1Z
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BU of 7d1z by Molmil
Cryo-EM structure of SET8-nucleosome complex
分子名称: DNA (145-MER), Histone H2A type 1-B/E, Histone H2B type 1-J, ...
著者Ho, C.-H, Takizawa, Y, Kobayashi, W, Arimura, Y, Kurumizaka, H.
登録日2020-09-15
公開日2021-02-10
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.15 Å)
主引用文献Structural basis of nucleosomal histone H4 lysine 20 methylation by SET8 methyltransferase.
Life Sci Alliance, 4, 2021
7CRQ
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BU of 7crq by Molmil
NSD3 bearing E1181K/T1232A dual mutation in complex with 187-bp NCP (2:1 binding mode)
分子名称: DNA (168-MER), Histone H2A, Histone H2B, ...
著者Li, W, Tian, W, Yuan, G, Deng, P, Gozani, O, Patel, D, Wang, Z.
登録日2020-08-14
公開日2020-10-21
最終更新日2021-03-03
実験手法ELECTRON MICROSCOPY (3.15 Å)
主引用文献Molecular basis of nucleosomal H3K36 methylation by NSD methyltransferases.
Nature, 590, 2021
7CRP
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BU of 7crp by Molmil
NSD3 bearing E1181K/T1232A dual mutation in complex with 187-bp NCP (1:1 binding mode)
分子名称: DNA (168-MER), Histone H2A, Histone H2B, ...
著者Li, W, Tian, W, Yuan, G, Deng, P, Gozani, O, Patel, D, Wang, Z.
登録日2020-08-14
公開日2020-10-21
最終更新日2021-03-03
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Molecular basis of nucleosomal H3K36 methylation by NSD methyltransferases.
Nature, 590, 2021
7CRO
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BU of 7cro by Molmil
NSD2 bearing E1099K/T1150A dual mutation in complex with 187-bp NCP
分子名称: DNA (168-MER), Histone H2A, Histone H2B, ...
著者Li, W, Tian, W, Yuan, G, Deng, P, Gozani, O, Patel, D, Wang, Z.
登録日2020-08-14
公開日2020-10-21
最終更新日2021-03-03
実験手法ELECTRON MICROSCOPY (3.75 Å)
主引用文献Molecular basis of nucleosomal H3K36 methylation by NSD methyltransferases.
Nature, 590, 2021
7CRR
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BU of 7crr by Molmil
Native NSD3 bound to 187-bp nucleosome
分子名称: DNA (168-MER), DNA(168-MER), Histone H2A, ...
著者Li, W, Tian, W, Yuan, G, Deng, P, Gozani, O, Patel, D, Wang, Z.
登録日2020-08-14
公開日2020-10-21
最終更新日2021-03-03
実験手法ELECTRON MICROSCOPY (3.48 Å)
主引用文献Molecular basis of nucleosomal H3K36 methylation by NSD methyltransferases.
Nature, 590, 2021
6ZRB
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BU of 6zrb by Molmil
Crystal structure of SMYD3 conjugate with piperidine-based covalent inhibitor EM127
分子名称: ACETATE ION, Histone-lysine N-methyltransferase SMYD3, N-[1-(2-Chloroacetyl)piperidin-4-yl]-5-cyclopropyl-1,2-oxazole-3-carboxamide, ...
著者Talibov, V.O, Eriksson, D.
登録日2020-07-13
公開日2022-07-27
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Discovery of the 4-aminopiperidine-based compound EM127 for the site-specific covalent inhibition of SMYD3
Eur.J.Med.Chem., 2022
6X0P
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BU of 6x0p by Molmil
Ash1L SET domain Q2265A mutant in complex with AS-5
分子名称: 3-[6-(aminomethyl)-1-(2-hydroxyethyl)-1H-indol-3-yl]benzene-1-carbothioamide, Histone-lysine N-methyltransferase ASH1L, S-ADENOSYLMETHIONINE, ...
著者Rogawski, D.S, Li, H, Borkin, D, Cierpicki, T, Grembecka, J.
登録日2020-05-17
公開日2021-04-07
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.69 Å)
主引用文献Discovery of first-in-class inhibitors of ASH1L histone methyltransferase with anti-leukemic activity.
Nat Commun, 12, 2021
6Z2A
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BU of 6z2a by Molmil
Structure of Clr4 mutant - F256A/F310A/F427A bound to SAH
分子名称: Histone-lysine N-methyltransferase, H3 lysine-9 specific, MAGNESIUM ION, ...
著者Stirpe, A, Schalch, T.
登録日2020-05-15
公開日2021-05-26
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.456 Å)
主引用文献SUV39 SET domains mediate crosstalk of heterochromatic histone marks.
Elife, 10, 2021
6WZW
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BU of 6wzw by Molmil
Ash1L SET domain in complex with AS-85
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Histone-lysine N-methyltransferase ASH1L, N-{[3-(3-carbamothioylphenyl)-1-{1-[(trifluoromethyl)sulfonyl]piperidin-4-yl}-1H-indol-6-yl]methyl}azetidine-3-carboxamide, ...
著者Li, H, Deng, J, Cierpicki, T, Grembecka, J.
登録日2020-05-14
公開日2021-04-07
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.69 Å)
主引用文献Discovery of first-in-class inhibitors of ASH1L histone methyltransferase with anti-leukemic activity.
Nat Commun, 12, 2021
6YUH
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BU of 6yuh by Molmil
Crystal structure of SMYD3 with diperodon R enantiomer bound to allosteric site
分子名称: Diperodon, GLYCEROL, Histone-lysine N-methyltransferase SMYD3, ...
著者Cederfelt, D, Talibov, V.O, Dobritzsch, D, Danielson, U.H.
登録日2020-04-27
公開日2021-01-13
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献Discovery of an Allosteric Ligand Binding Site in SMYD3 Lysine Methyltransferase.
Chembiochem, 22, 2021
6WKR
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BU of 6wkr by Molmil
PRC2-AEBP2-JARID2 bound to H2AK119ub1 nucleosome
分子名称: DNA (314-MER), Histone H2A type 1, Histone H2B 1.1, ...
著者Kasinath, V, Nogales, E, Beck, C, Sauer, P, Poepsel, S, Kosmatka, J, Faini, M, Toso, D, Aebersold, R.
登録日2020-04-16
公開日2021-02-03
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献JARID2 and AEBP2 regulate PRC2 in the presence of H2AK119ub1 and other histone modifications.
Science, 371, 2021
6WK2
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BU of 6wk2 by Molmil
SETD3 mutant (N255V) in Complex with an Actin Peptide with His73 Replaced with Methionine
分子名称: 1,2-ETHANEDIOL, Actin, cytoplasmic 2, ...
著者Dai, S, Horton, J.R, Cheng, X.
登録日2020-04-15
公開日2020-06-17
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.76 Å)
主引用文献Characterization of SETD3 methyltransferase-mediated protein methionine methylation.
J.Biol.Chem., 295, 2020
6WK1
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BU of 6wk1 by Molmil
SETD3 in Complex with an Actin Peptide with His73 Replaced with Methionine
分子名称: 1,2-ETHANEDIOL, ACETATE ION, Actin, ...
著者Dai, S, Horton, J.R, Cheng, X.
登録日2020-04-15
公開日2020-06-17
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献Characterization of SETD3 methyltransferase-mediated protein methionine methylation.
J.Biol.Chem., 295, 2020
7BUC
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BU of 7buc by Molmil
Crystal structure of EHMT2 SET domain in complex with compound 13
分子名称: Histone-lysine N-methyltransferase EHMT2, N2-[4-methoxy-3-(2,3,4,7-tetrahydro-1H-azepin-5-yl)phenyl]-N4,6-dimethyl-pyrimidine-2,4-diamine, S-ADENOSYLMETHIONINE, ...
著者Suzuki, M, Mizuno, M, Katayama, K.
登録日2020-04-06
公開日2020-11-11
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Discovery of novel histone lysine methyltransferase G9a/GLP (EHMT2/1) inhibitors: Design, synthesis, and structure-activity relationships of 2,4-diamino-6-methylpyrimidines.
Bioorg.Med.Chem.Lett., 30, 2020
7BTV
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BU of 7btv by Molmil
Crystal structure of EHMT2 SET domain in complex with compound 5.
分子名称: Histone-lysine N-methyltransferase EHMT2, N~2~-{4-methoxy-3-[3-(pyrrolidin-1-yl)propoxy]phenyl}-N~4~,6-dimethylpyrimidine-2,4-diamine, S-ADENOSYLMETHIONINE, ...
著者Suzuki, M, Mizuno, T, Katayama, K.
登録日2020-04-03
公開日2020-11-11
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Discovery of novel histone lysine methyltransferase G9a/GLP (EHMT2/1) inhibitors: Design, synthesis, and structure-activity relationships of 2,4-diamino-6-methylpyrimidines.
Bioorg.Med.Chem.Lett., 30, 2020
7BRE
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BU of 7bre by Molmil
The crystal structure of MLL2 in complex with ASH2L and RBBP5
分子名称: Histone-lysine N-methyltransferase 2B, Retinoblastoma-binding protein 5, S-ADENOSYL-L-HOMOCYSTEINE, ...
著者Li, Y, Zhao, L, Chen, Y.
登録日2020-03-28
公開日2020-07-22
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.803 Å)
主引用文献Crystal Structure of MLL2 Complex Guides the Identification of a Methylation Site on P53 Catalyzed by KMT2 Family Methyltransferases.
Structure, 28, 2020

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