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3RLH
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Crystal structure of a class II phospholipase D from Loxosceles intermedia venom
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, MAGNESIUM ION, ...
Authors:Giuseppe, P.O, Ullah, A, Veiga, S.S, Murakami, M.T, Arni, R.K.
Deposit date:2011-04-19
Release date:2011-06-29
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Structure of a novel class II phospholipase D: Catalytic cleft is modified by a disulphide bridge.
Biochem.Biophys.Res.Commun., 409, 2011
3RM5
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BU of 3rm5 by Molmil
Structure of Trifunctional THI20 from Yeast
Descriptor: Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase THI20, SULFATE ION
Authors:French, J.B, Begley, T.P, Ealick, S.E.
Deposit date:2011-04-20
Release date:2011-09-21
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.68 Å)
Cite:Structure of trifunctional THI20 from yeast.
Acta Crystallogr.,Sect.D, 67, 2011
3R2Y
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MK2 kinase bound to Compound 1
Descriptor: 2-(2-QUINOLIN-3-YLPYRIDIN-4-YL)-1,5,6,7-TETRAHYDRO-4H-PYRROLO[3,2-C]PYRIDIN-4-ONE, MALONATE ION, MAP kinase-activated protein kinase 2
Authors:Oubrie, A, Leonard, P.
Deposit date:2011-03-15
Release date:2011-05-25
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure-based lead identification of ATP-competitive MK2 inhibitors.
Bioorg.Med.Chem.Lett., 21, 2011
3RMT
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BU of 3rmt by Molmil
Crystal structure of putative 5-enolpyruvoylshikimate-3-phosphate synthase from Bacillus halodurans C-125
Descriptor: 3-phosphoshikimate 1-carboxyvinyltransferase 1, SULFATE ION
Authors:Malashkevich, V.N, Toro, R, Seidel, R, Ramagopal, U, Zencheck, W, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2011-04-21
Release date:2011-05-18
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of putative 5-enolpyruvoylshikimate-3-phosphate synthase from Bacillus halodurans C-125
To be Published
3RO7
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BU of 3ro7 by Molmil
Crystal Structure of Mouse Apolipoprotein A-I Binding Protein in Complex with Thymine.
Descriptor: Apolipoprotein A-I-binding protein, SULFATE ION, THYMINE
Authors:Shumilin, I.A, Jha, K.N, Cymborowski, M, Herr, J.C, Minor, W.
Deposit date:2011-04-25
Release date:2012-07-18
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Identification of unknown protein function using metabolite cocktail screening.
Structure, 20, 2012
3R3U
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BU of 3r3u by Molmil
Crystal Structure of the Fluoroacetate Dehalogenase RPA1163 - WT/apo
Descriptor: CHLORIDE ION, Fluoroacetate dehalogenase, NICKEL (II) ION
Authors:Chan, P.W.Y, Yakunin, A.F, Edwards, E.A, Pai, E.F.
Deposit date:2011-03-16
Release date:2011-05-04
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Mapping the reaction coordinates of enzymatic defluorination.
J.Am.Chem.Soc., 133, 2011
3RPN
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BU of 3rpn by Molmil
Crystal structure of human kappa class glutathione transferase in complex with S-hexylglutathione
Descriptor: Glutathione S-transferase kappa 1, S-HEXYLGLUTATHIONE
Authors:Wang, B, Peng, Y, Zhang, T, Ding, J.
Deposit date:2011-04-27
Release date:2011-07-13
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structures and kinetic studies of human Kappa class glutathione transferase provide insights into the catalytic mechanism.
Biochem.J., 439, 2011
3R6R
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BU of 3r6r by Molmil
Structure of the complex of an intramolecular human telomeric DNA with Berberine formed in K+ solution
Descriptor: BERBERINE, DNA (22-mer), POTASSIUM ION
Authors:Ferraroni, M, Bazzicalupi, C, Gratteri, P, Bilia, A.R.
Deposit date:2011-03-22
Release date:2012-02-29
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The crystal structure of human telomeric DNA complexed with berberine: an interesting case of stacked ligand to G-tetrad ratio higher than 1:1.
Nucleic Acids Res., 41, 2013
3RSF
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BU of 3rsf by Molmil
Crystal structure of tm0922, a fusion of a domain of unknown function and ADP/ATP-dependent NAD(P)H-hydrate dehydratase from Thermotoga maritima in complex with P1,P4-Di(adenosine-5') tetraphosphate
Descriptor: BIS(ADENOSINE)-5'-TETRAPHOSPHATE, POTASSIUM ION, Putative uncharacterized protein, ...
Authors:Shumilin, I.A, Cymborowski, M, Lesley, S.A, Minor, W.
Deposit date:2011-05-02
Release date:2011-06-22
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Identification of unknown protein function using metabolite cocktail screening.
Structure, 20, 2012
3PZ5
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The crystal structure of AaLeuRS-CP1-D20
Descriptor: Leucyl-tRNA synthetase subunit alpha
Authors:Liu, R.J, Wang, E.D.
Deposit date:2010-12-14
Release date:2011-08-24
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Peripheral insertion modulates the editing activity of the isolated CP1 domain of leucyl-tRNA synthetase
Biochem.J., 440, 2011
3PZP
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BU of 3pzp by Molmil
Human DNA polymerase kappa extending opposite a cis-syn thymine dimer
Descriptor: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, 5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*CP*CP*A)-3', 5'-D(*TP*TP*CP*CP*(TTD)P*GP*GP*TP*CP*CP*TP*TP*CP*CP*CP*CP*C)-3', ...
Authors:Vasquez-Del Carpio, R, Silverstein, T.D, Lone, S, Johnson, R.E, Prakash, S, Prakash, L, Aggarwal, A.K.
Deposit date:2010-12-14
Release date:2011-12-28
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3.336 Å)
Cite:Role of human DNA polymerase kappa in extension opposite from a cis-syn thymine dimer.
J.Mol.Biol., 408, 2011
3Q0J
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BU of 3q0j by Molmil
Crystal Structure of the Mycobacterium tuberculosis Crotonase in complex with the Inhibitor AcetoacetylCoA
Descriptor: ACETOACETYL-COENZYME A, enoyl-CoA hydratase echA8
Authors:Bruning, J.B, Delgado, E, Ghosh, S, Sacchettini, J.C, TB Structural Genomics Consortium (TBSGC)
Deposit date:2010-12-15
Release date:2012-01-25
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal Structure and Mechanism of the Prokaryotic Crotonase
To be Published
3Q17
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BU of 3q17 by Molmil
Structure of a slow CLC Cl-/H+ antiporter from a cyanobacterium in Bromide
Descriptor: BROMIDE ION, Sll0855 protein
Authors:Jayaram, H, Robertson, J.L, Fang, W, Williams, C, Miller, C.
Deposit date:2010-12-16
Release date:2011-01-19
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Structure of a Slow CLC Cl(-)/H(+) Antiporter from a Cyanobacterium.
Biochemistry, 50, 2011
3PKY
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BU of 3pky by Molmil
Polymerase Domain from Mycobacterium tuberculosis Ligase D in complex with DNA, UTP and Manganese.
Descriptor: DNA 5'-D(*G*CP*CP*GP*CP*AP*AP*CP*GP*CP*AP*CP*G)-3', DNA 5'-D(P*GP*CP*GP*GP*C)-3', MANGANESE (II) ION, ...
Authors:Brissett, N.C, Fox, G.C, Pitcher, R.S, Doherty, A.J.
Deposit date:2010-11-12
Release date:2011-02-16
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structure of a Preternary Complex Involving a Prokaryotic NHEJ DNA Polymerase.
Mol.Cell, 41, 2011
3Q29
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BU of 3q29 by Molmil
Cyrstal structure of human alpha-synuclein (1-19) fused to maltose binding protein (MBP)
Descriptor: GLYCEROL, Maltose-binding periplasmic protein/alpha-synuclein chimeric protein, SULFATE ION, ...
Authors:Zhao, M, Sawaya, M.R, Cascio, D, Eisenberg, D.
Deposit date:2010-12-19
Release date:2011-06-01
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structures of segments of alpha-synuclein fused to maltose-binding protein suggest intermediate states during amyloid formation
Protein Sci., 20, 2011
3Q4L
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BU of 3q4l by Molmil
Structure of a small peptide ligand bound to E.coli DNA sliding clamp
Descriptor: DNA polymerase III subunit beta, SODIUM ION, peptide ligand
Authors:Wolff, P, Olieric, V, Briand, J.P, Chaloin, O, Dejaegere, A, Dumas, P, Ennifar, E, Guichard, G, Wagner, J, Burnouf, D.
Deposit date:2010-12-23
Release date:2011-12-28
Last modified:2013-03-20
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structure-based design of short peptide ligands binding onto the E. coli processivity ring.
J.Med.Chem., 54, 2011
3PJY
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BU of 3pjy by Molmil
Crystal structure of a putative transcription regulator (R01717) from Sinorhizobium meliloti 1021 at 1.55 A resolution
Descriptor: CHLORIDE ION, Hypothetical signal peptide protein, SULFATE ION
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2010-11-10
Release date:2010-12-22
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Crystal structure of a putative transcription regulator (R01717) from Sinorhizobium meliloti 1021 at 1.55 A resolution
To be published
3PNQ
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BU of 3pnq by Molmil
Crystal Structure of E.coli Dha kinase DhaK (H56N) complex with Dha
Descriptor: Dihydroxyacetone, PTS-dependent dihydroxyacetone kinase, dihydroxyacetone-binding subunit dhaK
Authors:Shi, R, McDonald, L, Matte, A, Cygler, M, Ekiel, I, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)
Deposit date:2010-11-19
Release date:2011-01-12
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural and mechanistic insight into covalent substrate binding by Escherichia coli dihydroxyacetone kinase.
Proc.Natl.Acad.Sci.USA, 108, 2011
3PM6
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BU of 3pm6 by Molmil
Crystal structure of a putative fructose-1,6-biphosphate aldolase from Coccidioides immitis solved by combined SAD MR
Descriptor: IODIDE ION, Putative fructose-bisphosphate aldolase, ZINC ION
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2010-11-16
Release date:2010-12-15
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:SAD phasing using iodide ions in a high-throughput structural genomics environment.
J Struct Funct Genomics, 12, 2011
3PN5
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BU of 3pn5 by Molmil
Crystal structure of Arabidopsis thaliana petide deformylase 1B (AtPDF1B) G41Q mutant
Descriptor: Peptide deformylase 1B, chloroplastic, ZINC ION
Authors:Fieulaine, S, Meinnel, T, Giglione, C.
Deposit date:2010-11-18
Release date:2011-06-08
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Trapping conformational States along ligand-binding dynamics of Peptide deformylase: the impact of induced fit on enzyme catalysis.
Plos Biol., 9, 2011
3PR3
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BU of 3pr3 by Molmil
Crystal structure of Plasmodium falciparum glucose-6-phosphate isomerase (PF14_0341) in complex with fructose-6-phosphate
Descriptor: 6-O-phosphono-beta-D-fructofuranose, Glucose-6-phosphate isomerase, PHOSPHATE ION
Authors:Gileadi, T, Wernimont, A.K, Hutchinson, A, Weadge, J, Cossar, D, Lew, J, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Weigelt, J, Hui, R, Hills, T, Pizarro, J.C, Structural Genomics Consortium (SGC)
Deposit date:2010-11-29
Release date:2011-02-09
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Crystal structure of Plasmodium falciparum glucose-6-phosphate isomerase (PF14_0341) in complex with fructose-6-phosphate
To be Published
3PO1
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BU of 3po1 by Molmil
Thrombin in complex with Benzothiazole Guanidine
Descriptor: ACETATE ION, SODIUM ION, Thrombin heavy chain, ...
Authors:Xue, Y.
Deposit date:2010-11-21
Release date:2011-11-23
Last modified:2012-07-25
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Discovery of benzothiazole guanidines as novel inhibitors of thrombin and trypsin IV.
Bioorg.Med.Chem.Lett., 22, 2012
3PSK
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BU of 3psk by Molmil
Crystal Structure of the Spt6 Tandem SH2 Domain from Saccharomyces cerevisiae, Form Native Spt6 (1247-1451)
Descriptor: SULFATE ION, Transcription elongation factor SPT6
Authors:Close, D, Hill, C.P.
Deposit date:2010-12-01
Release date:2011-03-30
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structures of the S. cerevisiae Spt6 core and C-terminal tandem SH2 domain.
J.Mol.Biol., 408, 2011
3PPW
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Crystal structure of the D1596A mutant of an engineered VWF A2 domain (N1493C and C1670S)
Descriptor: SODIUM ION, von Willebrand factor
Authors:Zhou, M, Dong, X, Zhong, C, Ding, J.
Deposit date:2010-11-25
Release date:2011-05-04
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:A novel calcium-binding site of von Willebrand factor A2 domain regulates its cleavage by ADAMTS13
Blood, 117, 2011
3PQ7
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Structure of I274C variant of E. coli KatE[] - Images 31-36
Descriptor: CIS-HEME D HYDROXYCHLORIN GAMMA-SPIROLACTONE, CIS-HEME D HYDROXYCHLORIN GAMMA-SPIROLACTONE 17R, 18S, ...
Authors:Loewen, P.C, Jha, V, Louis, S, Chelikani, P, Carpena, X, Fita, I.
Deposit date:2010-11-25
Release date:2010-12-22
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Modulation of heme orientation and binding by a single residue in catalase HPII of Escherichia coli.
Biochemistry, 50, 2011

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