Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 52 results

1DEF
DownloadVisualize
BU of 1def by Molmil
PEPTIDE DEFORMYLASE CATALYTIC CORE (RESIDUES 1-147), NMR, 9 STRUCTURES
Descriptor: PEPTIDE DEFORMYLASE, ZINC ION
Authors:Meinnel, T, Dardel, F.
Deposit date:1996-03-19
Release date:1997-04-21
Last modified:2022-02-16
Method:SOLUTION NMR
Cite:A new subclass of the zinc metalloproteases superfamily revealed by the solution structure of peptide deformylase.
J.Mol.Biol., 262, 1996
2DEF
DownloadVisualize
BU of 2def by Molmil
PEPTIDE DEFORMYLASE CATALYTIC CORE (RESIDUES 1-147), NMR, 20 STRUCTURES
Descriptor: NICKEL (II) ION, PEPTIDE DEFORMYLASE
Authors:Meinnel, T, Dardel, F.
Deposit date:1997-12-15
Release date:1998-03-18
Last modified:2022-03-09
Method:SOLUTION NMR
Cite:Solution structure of nickel-peptide deformylase.
J.Mol.Biol., 280, 1998
5MTE
DownloadVisualize
BU of 5mte by Molmil
Crystal structure of PDF from the Vibrio parahaemolyticus bacteriophage VP16T in complex with actinonin - crystal form II
Descriptor: ACTINONIN, NICKEL (II) ION, Putative uncharacterized protein orf60T, ...
Authors:Fieulaine, S, Grzela, R, Giglione, C, Meinnel, T.
Deposit date:2017-01-09
Release date:2017-11-29
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Peptide deformylases from Vibrio parahaemolyticus phage and bacteria display similar deformylase activity and inhibitor binding clefts.
Biochim. Biophys. Acta, 1866, 2018
5MTC
DownloadVisualize
BU of 5mtc by Molmil
Crystal structure of PDF from the Vibrio parahaemolyticus bacteriophage VP16T - crystal form I
Descriptor: NICKEL (II) ION, Putative uncharacterized protein orf60T, ZINC ION
Authors:Fieulaine, S, Grzela, R, Giglione, C, Meinnel, T.
Deposit date:2017-01-09
Release date:2017-09-20
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The C-terminal residue of phage Vp16 PDF, the smallest peptide deformylase, acts as an offset element locking the active conformation.
Sci Rep, 7, 2017
5MTD
DownloadVisualize
BU of 5mtd by Molmil
Crystal structure of PDF from the Vibrio parahaemolyticus bacteriophage VP16T - crystal form II
Descriptor: NICKEL (II) ION, Putative uncharacterized protein orf60T, TRIETHYLENE GLYCOL, ...
Authors:Fieulaine, S, Grzela, R, Giglione, C, Meinnel, T.
Deposit date:2017-01-09
Release date:2017-09-20
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:The C-terminal residue of phage Vp16 PDF, the smallest peptide deformylase, acts as an offset element locking the active conformation.
Sci Rep, 7, 2017
6QRM
DownloadVisualize
BU of 6qrm by Molmil
HsNMT1 in complex with both MyrCoA and GNCFSKRRAA substrates
Descriptor: Apoptosis-inducing factor 3, CHLORIDE ION, COENZYME A, ...
Authors:Dian, C, Riviere, F.B, Asensio, T, Giglione, C, Meinnel, T.
Deposit date:2019-02-19
Release date:2020-03-18
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:High-resolution snapshots of human N-myristoyltransferase in action illuminate a mechanism promoting N-terminal Lys and Gly myristoylation.
Nat Commun, 11, 2020
6SK2
DownloadVisualize
BU of 6sk2 by Molmil
HsNMT1 in complex with both MyrCoA and Acetylated-GKSFSKPR peptide reveals N-terminal Lysine Myristoylation
Descriptor: Apoptosis-inducing factor 3, COENZYME A, GLYCEROL, ...
Authors:Dian, C, Riviere, F.B, Asensio, T, Giglione, C, Meinnel, T.
Deposit date:2019-08-14
Release date:2020-03-18
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.90000653 Å)
Cite:High-resolution snapshots of human N-myristoyltransferase in action illuminate a mechanism promoting N-terminal Lys and Gly myristoylation.
Nat Commun, 11, 2020
6SKJ
DownloadVisualize
BU of 6skj by Molmil
DeltaC2 C-terminal truncation of HsNMT1 in complex with MyrCoA and GNCFSKPR substrates
Descriptor: Apoptosis-inducing factor 3, COENZYME A, GLYCEROL, ...
Authors:Dian, C, Riviere, F.B, Asensio, T, Giglione, C, Meinnel, T.
Deposit date:2019-08-15
Release date:2020-03-18
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:High-resolution snapshots of human N-myristoyltransferase in action illuminate a mechanism promoting N-terminal Lys and Gly myristoylation.
Nat Commun, 11, 2020
6SK8
DownloadVisualize
BU of 6sk8 by Molmil
DeltaC3 C-terminal truncation of HsNMT1 in complex with MyrCoA and GDCFSKPR substrates
Descriptor: Apoptosis-inducing factor 3, CHLORIDE ION, GLYCEROL, ...
Authors:Dian, C, Riviere, F.B, Asensio, T, Giglione, C, Meinnel, T.
Deposit date:2019-08-14
Release date:2020-03-18
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:High-resolution snapshots of human N-myristoyltransferase in action illuminate a mechanism promoting N-terminal Lys and Gly myristoylation.
Nat Commun, 11, 2020
6SJZ
DownloadVisualize
BU of 6sjz by Molmil
HsNMT1 in complex with both MyrCoA and Acetylated-GNCFSKPR substrates
Descriptor: Apoptosis-inducing factor 3, CHLORIDE ION, GLYCEROL, ...
Authors:Dian, C, Riviere, F.B, Asensio, T, Giglione, C, Meinnel, T.
Deposit date:2019-08-14
Release date:2020-03-18
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.995 Å)
Cite:High-resolution snapshots of human N-myristoyltransferase in action illuminate a mechanism promoting N-terminal Lys and Gly myristoylation.
Nat Commun, 11, 2020
6SK3
DownloadVisualize
BU of 6sk3 by Molmil
C-terminal HsNMT1 deltaC3 truncation in complex with both MyrCoA and GNCFSKPR substrates
Descriptor: Apoptosis-inducing factor 3, GLYCEROL, Glycylpeptide N-tetradecanoyltransferase 1, ...
Authors:Dian, C, Riviere, F.B, Asensio, T, Giglione, C, Meinnel, T.
Deposit date:2019-08-14
Release date:2020-03-18
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:High-resolution snapshots of human N-myristoyltransferase in action illuminate a mechanism promoting N-terminal Lys and Gly myristoylation.
Nat Commun, 11, 2020
4JE8
DownloadVisualize
BU of 4je8 by Molmil
Crystal structure of a human-like mitochondrial peptide deformylase in complex with Met-Ala-Ser
Descriptor: Peptide deformylase 1A, chloroplastic/mitochondrial, ZINC ION, ...
Authors:Fieulaine, S, Meinnel, T, Giglione, C.
Deposit date:2013-02-26
Release date:2014-02-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Understanding the highly efficient catalysis of prokaryotic peptide deformylases by shedding light on the determinants specifying the low activity of the human counterpart.
Acta Crystallogr.,Sect.D, 70, 2014
4JE7
DownloadVisualize
BU of 4je7 by Molmil
Crystal structure of a human-like mitochondrial peptide deformylase in complex with actinonin
Descriptor: ACTINONIN, Peptide deformylase 1A, chloroplastic/mitochondrial, ...
Authors:Fieulaine, S, Meinnel, T, Giglione, C.
Deposit date:2013-02-26
Release date:2014-02-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Understanding the highly efficient catalysis of prokaryotic peptide deformylases by shedding light on the determinants specifying the low activity of the human counterpart.
Acta Crystallogr.,Sect.D, 70, 2014
4JE6
DownloadVisualize
BU of 4je6 by Molmil
Crystal structure of a human-like mitochondrial peptide deformylase
Descriptor: Peptide deformylase 1A, chloroplastic/mitochondrial, ZINC ION
Authors:Fieulaine, S, Meinnel, T, Giglione, C.
Deposit date:2013-02-26
Release date:2014-02-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Understanding the highly efficient catalysis of prokaryotic peptide deformylases by shedding light on the determinants specifying the low activity of the human counterpart.
Acta Crystallogr.,Sect.D, 70, 2014
7OWP
DownloadVisualize
BU of 7owp by Molmil
HsNMT1 in complex with both MyrCoA and ACE-G-(L-ORN)SFSKPR
Descriptor: ACE-GLY-ORN-SER-PHE-SER-LYS-PRO-ARG, GLYCEROL, Glycylpeptide N-tetradecanoyltransferase 1, ...
Authors:Dian, C, Giglione, C, Meinnel, T.
Deposit date:2021-06-18
Release date:2022-12-21
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Structural and Large-scale Analysis Unveil the Intertwined Paths Promoting NMT-catalyzed Lysine and Glycine Myristoylation.
J.Mol.Biol., 434, 2022
7OWO
DownloadVisualize
BU of 7owo by Molmil
HsNMT1 in complex with both MyrCoA and N-acetylated KSFSKPR peptide
Descriptor: COENZYME A, GLYCEROL, Glycylpeptide N-tetradecanoyltransferase 1, ...
Authors:Dian, C, Giglione, C, Meinnel, T.
Deposit date:2021-06-18
Release date:2022-12-21
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural and Large-scale Analysis Unveil the Intertwined Paths Promoting NMT-catalyzed Lysine and Glycine Myristoylation.
J.Mol.Biol., 434, 2022
7OWN
DownloadVisualize
BU of 7own by Molmil
HsNMT1 in complex with both MyrCoA and peptide AKSFSKPR
Descriptor: ALA-LYS-SER-PHE-SER-LYS-PRO-ARG, GLYCEROL, Glycylpeptide N-tetradecanoyltransferase 1, ...
Authors:Dian, C, Giglione, C, Meinnel, T.
Deposit date:2021-06-18
Release date:2022-12-21
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural and Large-scale Analysis Unveil the Intertwined Paths Promoting NMT-catalyzed Lysine and Glycine Myristoylation.
J.Mol.Biol., 434, 2022
7OWU
DownloadVisualize
BU of 7owu by Molmil
HsNMT1 in complex with both CoA and Myr-ANCFSKPR peptide
Descriptor: ALA-ASN-CYS-PHE-SER-LYS-PRO-ARG, COENZYME A, GLYCEROL, ...
Authors:Dian, C, Giglione, C, Meinnel, T.
Deposit date:2021-06-18
Release date:2022-12-21
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:Structural and Large-scale Analysis Unveil the Intertwined Paths Promoting NMT-catalyzed Lysine and Glycine Myristoylation.
J.Mol.Biol., 434, 2022
7OWM
DownloadVisualize
BU of 7owm by Molmil
HsNMT1 in complex with both MyrCoA and HCPA substrate peptide GKQNSKLR
Descriptor: GLYCEROL, Glycylpeptide N-tetradecanoyltransferase 1, Neuron-specific calcium-binding protein hippocalcin, ...
Authors:Dian, C, Giglione, C, Meinnel, T.
Deposit date:2021-06-18
Release date:2022-12-21
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural and Large-scale Analysis Unveil the Intertwined Paths Promoting NMT-catalyzed Lysine and Glycine Myristoylation.
J.Mol.Biol., 434, 2022
7OWR
DownloadVisualize
BU of 7owr by Molmil
HsNMT1 in complex with both MyrCoA and peptide GGKSFSKPR
Descriptor: GLY-GLY-LYS-SER-PHE-SER-LYS-PRO-ARG, GLYCEROL, Glycylpeptide N-tetradecanoyltransferase 1, ...
Authors:Dian, C, Giglione, C, Meinnel, T.
Deposit date:2021-06-18
Release date:2022-12-21
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.39 Å)
Cite:Structural and Large-scale Analysis Unveil the Intertwined Paths Promoting NMT-catalyzed Lysine and Glycine Myristoylation.
J.Mol.Biol., 434, 2022
7OWQ
DownloadVisualize
BU of 7owq by Molmil
HsNMT1 in complex with both MyrCoA and peptide N-Methylated-GNCFSKPR
Descriptor: Glycylpeptide N-tetradecanoyltransferase 1, MGY-ASN-CYS-PHE-SER-LYS-PRO-ARG, TETRADECANOYL-COA
Authors:Dian, C, Giglione, C, Meinnel, T.
Deposit date:2021-06-18
Release date:2022-12-21
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural and Large-scale Analysis Unveil the Intertwined Paths Promoting NMT-catalyzed Lysine and Glycine Myristoylation.
J.Mol.Biol., 434, 2022
5O9S
DownloadVisualize
BU of 5o9s by Molmil
HsNMT1 in complex with CoA and Myristoylated-GKSNSKLK octapeptide
Descriptor: CHLORIDE ION, GLYCEROL, Glycylpeptide N-tetradecanoyltransferase 1, ...
Authors:Dian, C, Meinnel, T, Giglione, C.
Deposit date:2017-06-20
Release date:2018-06-27
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural and genomic decoding of human and plant myristoylomes reveals a definitive recognition pattern.
Nat. Chem. Biol., 14, 2018
5O9V
DownloadVisualize
BU of 5o9v by Molmil
HsNMT1 in complex with CoA and Myristoylated-GGCFSKPK octapeptide
Descriptor: Apoptosis-inducing factor 3, CHLORIDE ION, COENZYME A, ...
Authors:Dian, C, Meinnel, T, Giglione, C.
Deposit date:2017-06-20
Release date:2018-06-27
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.201 Å)
Cite:Structural and genomic decoding of human and plant myristoylomes reveals a definitive recognition pattern.
Nat. Chem. Biol., 14, 2018
5O9T
DownloadVisualize
BU of 5o9t by Molmil
HsNMT1 in complex with CoA and acetylated-NCFSKPK peptide
Descriptor: 1IP-CYS-PHE-SER-LYS-PRO-ARG, CHLORIDE ION, GLYCEROL, ...
Authors:Dian, C, Meinnel, T, Giglione, C.
Deposit date:2017-06-20
Release date:2018-06-27
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structural and genomic decoding of human and plant myristoylomes reveals a definitive recognition pattern.
Nat. Chem. Biol., 14, 2018
5O9U
DownloadVisualize
BU of 5o9u by Molmil
HsNMT1 in complex with CoA and Myristoylated-GCSVSKKK octapeptide
Descriptor: COENZYME A, Calcineurin B-like protein 4, GLYCEROL, ...
Authors:Dian, C, Meinnel, T, Giglione, C.
Deposit date:2017-06-20
Release date:2018-06-27
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structural and genomic decoding of human and plant myristoylomes reveals a definitive recognition pattern.
Nat. Chem. Biol., 14, 2018

 

123>

218853

PDB entries from 2024-04-24

PDB statisticsPDBj update infoContact PDBjnumon