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PDB: 229 results

5TRU
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BU of 5tru by Molmil
Structure of the first-in-class checkpoint inhibitor Ipilimumab bound to human CTLA-4
Descriptor: Cytotoxic T-lymphocyte protein 4, Ipilimumab Fab heavy chain, Ipilimumab Fab light chain
Authors:Ramagopal, U.A, Liu, W, Garrett-Thomson, S.C, Yan, Q, Srinivasan, M, Wong, S.C, Bell, A, Mankikar, S, Rangan, V.S, Deshpande, S, Bonanno, J.B, Korman, A.J, Almo, S.C.
Deposit date:2016-10-27
Release date:2017-05-10
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural basis for cancer immunotherapy by the first-in-class checkpoint inhibitor ipilimumab.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
1TWY
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BU of 1twy by Molmil
Crystal structure of an ABC-type phosphate transport receptor from Vibrio cholerae
Descriptor: ABC transporter, periplasmic substrate-binding protein, MAGNESIUM ION, ...
Authors:Ramagopal, U.A, Patskovsky, Y, Almo, S.C, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2004-07-01
Release date:2004-12-21
Last modified:2021-02-03
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal structure of hypothetical ABC-type phosphate transporter
To be Published
2A1V
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BU of 2a1v by Molmil
Crystal structure of Deinococcus radiodurans protein DR2400, Pfam domain DUF419
Descriptor: conserved hypothetical protein
Authors:Ramagopal, U.A, Patskovsky, Y.V, Almo, S.C, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2005-06-21
Release date:2005-07-26
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Hypothetical protein from Deinococcus radiodurans
To be Published
2A2L
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BU of 2a2l by Molmil
Crystal structure of Klebsiella pneumoniae protein ORFY, Pfam DUF336
Descriptor: unknown
Authors:Ramagopal, U, Patskovsky, Y, Almo, S.C, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2005-06-22
Release date:2005-06-28
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal Structure of Klebsiella Pneumoniae Hypothetical Protein Orfy
To be Published
4P5N
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BU of 4p5n by Molmil
Structure of CNAG_02591 from Cryptococcus neoformans
Descriptor: CADMIUM ION, GLYCEROL, Hypothetical protein CNAG_02591, ...
Authors:Ramagopal, U.A, McClelland, E.E, Toro, R, Casadevall, A, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2014-03-18
Release date:2014-05-28
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:A Small Protein Associated with Fungal Energy Metabolism Affects the Virulence of Cryptococcus neoformans in Mammals.
Plos Pathog., 12, 2016
4ETO
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BU of 4eto by Molmil
Structure of S100A4 in complex with non-muscle myosin-IIA peptide
Descriptor: CALCIUM ION, Myosin-9, Protein S100-A4
Authors:Ramagopal, U.A, Dulyaninova, N.G, Kumar, P.R, Almo, S.C, Bresnick, A.R, New York Structural Genomics Research Consortium (NYSGRC), Atoms-to-Animals: The Immune Function Network (IFN)
Deposit date:2012-04-24
Release date:2012-07-11
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:Structure of S100A4 with bound peptide P
To be Published
3S4T
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BU of 3s4t by Molmil
Crystal structure of putative amidohydrolase-2 (EFI-target 500288)from Polaromonas sp. JS666
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ACETATE ION, Amidohydrolase 2, ...
Authors:Ramagopal, U.A, Toro, R, Girlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2011-05-20
Release date:2011-08-24
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of putative amidohydrolase-2 (EFI-target 500288)from Polaromonas sp. JS666
To be published
1RZN
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BU of 1rzn by Molmil
Crystal Structure of Penicillin-binding protein-related factor A from Bacillus Subtilis.
Descriptor: Recombination protein U
Authors:Ramagopal, U.A, Almo, S.C, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2003-12-24
Release date:2004-11-30
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.302 Å)
Cite:Crystal Structure of Penicillin-binding protein-related factor A from Bacillus Subtilis.
To be Published
3RQ3
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BU of 3rq3 by Molmil
Structure of T-cell immunoreceptor with immunoglobulin and ITIM domains (TIGIT) in hexagonal crystal form
Descriptor: CHLORIDE ION, T cell immunoreceptor with Ig and ITIM domains
Authors:Ramagopal, U.A, Rubinstein, R, Guo, H, Samanta, D, Nathenson, S.G, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC), Atoms-to-Animals: The Immune Function Network (IFN)
Deposit date:2011-04-27
Release date:2011-06-01
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure of T-cell immunoreceptor with immunoglobulin and ITIM domains (TIGIT) in hexagonal crystal form
To be published
3S5S
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BU of 3s5s by Molmil
Crystal structure of putative mandelate racemase/muconate lactonizing enzyme (PSI/COM target 200551) from Sorangium cellulosum
Descriptor: Mandelate racemase/muconate lactonizing enzyme family protein, SULFATE ION
Authors:Ramagopal, U.A, Toro, R, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2011-05-23
Release date:2011-11-09
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of putative mandelate racemase/muconate lactonizing enzyme (PSI/COM target 200551) from Sorangium cellulosum
To be published
1OAD
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BU of 1oad by Molmil
Glucose isomerase from Streptomyces rubiginosus in P21212 crystal form
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ...
Authors:Ramagopal, U.A, Dauter, M, Dauter, Z.
Deposit date:2003-01-08
Release date:2003-01-30
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Sad Manganese in Two Crystal Forms of Glucose Isomerase
Acta Crystallogr.,Sect.D, 59, 2003
1RKQ
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BU of 1rkq by Molmil
Crystal structure of HAD-like phosphatase yidA from E. coli
Descriptor: CHLORIDE ION, Hypothetical protein yidA, MAGNESIUM ION
Authors:Ramagopal, U.A, Almo, S.C, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2003-11-23
Release date:2004-03-09
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystal Structure of NYSGRC target T1436: A Hypothetical protein yidA.
To be Published
4HSZ
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BU of 4hsz by Molmil
Structure of truncated (delta8C) S100A4
Descriptor: CALCIUM ION, Protein S100-A4
Authors:Ramagopal, U.A, Dulyaninova, N.G, Kumar, P.R, Almo, S.C, Bresnick, A.R, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2012-10-31
Release date:2013-01-30
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structure of truncated (delta8C) S100A4
To be Published
4HZA
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BU of 4hza by Molmil
Crystal Structure of the Immunoglobulin variable domain of Nectin-2 in monoclinic form
Descriptor: Poliovirus receptor-related protein 2
Authors:Ramagopal, U.A, Samanta, D, Nathenson, S.G, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC), Atoms-to-Animals: The Immune Function Network (IFN)
Deposit date:2012-11-14
Release date:2013-01-30
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal Structure of the Immunoglobulin variable domain of Nectin-2 in monoclinic form
To be published
3DBY
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BU of 3dby by Molmil
Crystal structure of uncharacterized protein from Bacillus cereus G9241 (CSAP Target)
Descriptor: 1,2-ETHANEDIOL, FE (III) ION, uncharacterized protein
Authors:Ramagopal, U.A, Bonanno, J.B, Ozyurt, S, Freeman, J, Wasserman, S, Hu, S, Groshong, C, Rodgers, L, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2008-06-02
Release date:2008-07-29
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of uncharacterized protein from Bacillus cereus G9241
To be published
3FN9
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BU of 3fn9 by Molmil
Crystal structure of putative beta-galactosidase from bacteroides fragilis
Descriptor: CHLORIDE ION, Putative beta-galactosidase
Authors:Ramagopal, U.A, Toro, R, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2008-12-23
Release date:2009-01-13
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure of putative beta-galactosidase from bacteroides fragilis
To be published
3FEF
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BU of 3fef by Molmil
Crystal structure of putative glucosidase lplD from bacillus subtilis
Descriptor: MAGNESIUM ION, Putative glucosidase lplD, ALPHA-GALACTURONIDASE, ...
Authors:Ramagopal, U.A, Rajashankar, K.R, Toro, R, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2008-11-28
Release date:2008-12-30
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of putative glucosidase lplD from bacillus subtilis.
To be published
3GFG
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BU of 3gfg by Molmil
Structure of putative oxidoreductase yvaA from Bacillus subtilis in triclinic form
Descriptor: Uncharacterized oxidoreductase yvaA
Authors:Ramagopal, U.A, Toro, R, Gilmore, M, Chang, S, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-02-26
Release date:2009-03-24
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.59 Å)
Cite:Crystal structure of putative oxidoreductase yvaA from Bacillus subtilis in triclinic form.
To be published
3IP3
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BU of 3ip3 by Molmil
Structure of putative oxidoreductase (TM_0425) from Thermotoga maritima
Descriptor: Oxidoreductase, putative, SULFATE ION
Authors:Ramagopal, U.A, Morano, C, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-08-16
Release date:2009-09-29
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (2.14 Å)
Cite:Structure of putative oxidoreductase (TM_0425) from Thermotoga maritima
To be Published
3IP1
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BU of 3ip1 by Molmil
Structure of putative alcohol dehydrogenase (TM_042) from Thermotoga maritima
Descriptor: Alcohol dehydrogenase, zinc-containing, CADMIUM ION, ...
Authors:Ramagopal, U.A, Toro, R, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-08-15
Release date:2009-09-29
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Structure of putative alcohol dehydrogenase (TM_042) from Thermotoga maritima
To be published
3LME
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BU of 3lme by Molmil
Structure of probable translation initiation inhibitor from (RPA2473) from Rhodopseudomonas palustris
Descriptor: Possible translation initiation inhibitor, SULFATE ION
Authors:Ramagopal, U.A, Toro, R, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2010-01-29
Release date:2010-03-02
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.74 Å)
Cite:Structure of probable translation initiation inhibitor from (RPA2473) from Rhodopseudomonas palustris
To be published
2I52
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BU of 2i52 by Molmil
Crystal structure of protein PTO0218 from Picrophilus torridus, Pfam DUF372
Descriptor: CALCIUM ION, CHLORIDE ION, GLYCEROL, ...
Authors:Ramagopal, U.A, Gilmore, J, Toro, R, Bain, K.T, McKenzie, C, Reyes, C, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2006-08-23
Release date:2006-09-12
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:Structure of hypothetical protein PTO0218 from Picrophilus torridus
To be Published
3M0W
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BU of 3m0w by Molmil
Structure of S100A4 with PCP
Descriptor: 1,4-DIETHYLENE DIOXIDE, 2-chloro-10-[3-(4-methylpiperazin-1-yl)propyl]-10H-phenothiazine, CALCIUM ION, ...
Authors:Ramagopal, U.A, Dulyaninova, N.G, Almo, S.C, Bresnick, A.R.
Deposit date:2010-03-03
Release date:2010-05-12
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure of S100A4 with PCP
To be published
3BGE
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BU of 3bge by Molmil
Crystal structure of the C-terminal fragment of AAA+ATPase from Haemophilus influenzae
Descriptor: Predicted ATPase, SULFATE ION
Authors:Ramagopal, U.A, Patskovsky, Y, Bonanno, J.B, Meyer, A.J, Toro, R, Freeman, J, Adams, J, Koss, J, Maletic, M, Gheyi, T, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2007-11-26
Release date:2008-01-01
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal structure of the C-terminal fragment of AAA+ATPase from Haemophilus influenzae.
To be Published
3BT5
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BU of 3bt5 by Molmil
Crystal structure of DUF305 fragment from Deinococcus radiodurans
Descriptor: CHLORIDE ION, Uncharacterized protein DUF305
Authors:Ramagopal, U.A, Patskovsky, Y, Rutter, M, Toro, R, Bain, K, Meyer, A.J, Powell, A, Gheyi, T, Wasserman, S, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2007-12-27
Release date:2008-01-15
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Crystal structure of DUF305 fragment from Deinococcus radiodurans.
To be Published

218853

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