PDB: 2015 resultsInfo pagesStatus searchChemie searchBIRD

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6OZL	Crystal structure of Mus musculus (Mm) Endonuclease V in complex with a 23mer RNA oligo containing an inosine after a 2 min soak in Mn2+ Descriptor: DNA/RNA (5'-R(P*CP*GP*GP*UP*AP*AP*CP*CP*C)-D(P*I)-R(P*AP*UP*AP*UP*GP*CP*AP*UP*GP*CP*AP*UP*U)-3'), Endonuclease V, GLYCEROL, ... Authors: Samara, N.L, Yang, W. Deposit date: 2019-05-15 Release date: 2019-09-04 Last modified: 2024-03-13 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Evolution of Inosine-Specific Endonuclease V from Bacterial DNase to Eukaryotic RNase. Mol.Cell, 76, 2019
6OZK	Crystal structure of Mus musculus (Mm) Endonuclease V in complex with a 23mer RNA oligo containing an inosine after 68h soak in Ca2+ Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, DNA/RNA (5'-R(P*CP*GP*GP*UP*AP*AP*CP*CP*C)-D(P*I)-R(P*AP*UP*AP*UP*GP*CP*AP*UP*GP*CP*AP*UP*U)-3'), ... Authors: Samara, N.L, Yang, W. Deposit date: 2019-05-15 Release date: 2019-09-04 Last modified: 2024-03-13 Method: X-RAY DIFFRACTION (2.104 Å) Cite: Evolution of Inosine-Specific Endonuclease V from Bacterial DNase to Eukaryotic RNase. Mol.Cell, 76, 2019
6OZR	Crystal structure of Mus musculus (Mm) Endonuclease V in complex with a 23mer RNA oligo containing an inosine after a 15 min soak in 10 mM Mg2+ Descriptor: 1,2-ETHANEDIOL, DNA/RNA (23-MER), Endonuclease V, ... Authors: Samara, N.L, Yang, W. Deposit date: 2019-05-15 Release date: 2019-09-04 Last modified: 2024-03-13 Method: X-RAY DIFFRACTION (2.15 Å) Cite: Evolution of Inosine-Specific Endonuclease V from Bacterial DNase to Eukaryotic RNase. Mol.Cell, 76, 2019
6OZF	Crystal structure of Thermotoga maritima (Tm) Endonuclease V (D110N) in complex with a 12mer DNA containing an inosine followed by a ribo-adenosine Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, DNA/RNA (5'-D(P*AP*AP*TP*GP*I)-R(P*A)-D(P*GP*AP*TP*GP*CP*T)-3'), ... Authors: Samara, N.L, Yang, W. Deposit date: 2019-05-15 Release date: 2019-09-04 Last modified: 2023-10-11 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Evolution of Inosine-Specific Endonuclease V from Bacterial DNase to Eukaryotic RNase. Mol.Cell, 76, 2019
6OZM	Crystal structure of Mus musculus (Mm) Endonuclease V in complex with a 23mer RNA oligo containing an inosine after a 10 min soak in 10 mM Mn2+ Descriptor: 1,2-ETHANEDIOL, DNA/RNA (5'-R(P*CP*GP*GP*UP*AP*AP*CP*CP*C)-D(P*I)-R(P*AP*UP*AP*UP*GP*CP*AP*UP*GP*CP*AP*UP*U)-3'), Endonuclease V, ... Authors: Samara, N.L, Yang, W. Deposit date: 2019-05-15 Release date: 2019-09-04 Last modified: 2024-03-13 Method: X-RAY DIFFRACTION (2.15 Å) Cite: Evolution of Inosine-Specific Endonuclease V from Bacterial DNase to Eukaryotic RNase. Mol.Cell, 76, 2019
6OZO	Crystal structure of Mus musculus (Mm) Endonuclease V in complex with a 23mer RNA oligo containing an inosine after a 30 min soak in 10 mM Mn2+ Descriptor: 1,2-ETHANEDIOL, DNA/RNA (5'-R(*CP*GP*GP*UP*AP*AP*CP*CP*C)-D(P*I)-R(P*AP*UP*AP*UP*GP*CP*AP*UP*GP*CP*AP*UP*U)-3'), Endonuclease V, ... Authors: Samara, N.L, Yang, W. Deposit date: 2019-05-15 Release date: 2019-09-04 Last modified: 2024-03-13 Method: X-RAY DIFFRACTION (2.235 Å) Cite: Evolution of Inosine-Specific Endonuclease V from Bacterial DNase to Eukaryotic RNase. Mol.Cell, 76, 2019
6P6D	HUMAN IGG1 FC FRAGMENT, C239 INSERTION MUTANT Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, CYSTEINE, IgG1 Fc fragment Authors: Gallagher, D.T, Dimasi, N, McCullough, C. Deposit date: 2019-06-03 Release date: 2020-04-15 Last modified: 2023-10-11 Method: X-RAY DIFFRACTION (2.31 Å) Cite: Structure and Dynamics of a Site-Specific Labeled Fc Fragment with Altered Effector Functions. Pharmaceutics, 11, 2019
6P2L	Crystal structure of Niastella koreensis GH74 (NkGH74) enzyme Descriptor: CHLORIDE ION, Glycosyl hydrolase BNR repeat-containing protein, alpha-D-xylopyranose-(1-6)-beta-D-glucopyranose-(1-4)-[alpha-D-xylopyranose-(1-6)]beta-D-glucopyranose-(1-4)-[alpha-D-xylopyranose-(1-6)]beta-D-glucopyranose-(1-4)-beta-D-glucopyranose, ... Authors: Stogios, P.J, Skarina, T, Arnal, G, Brumer, H, Savchenko, A. Deposit date: 2019-05-21 Release date: 2019-07-31 Last modified: 2023-10-11 Method: X-RAY DIFFRACTION (1.08 Å) Cite: Substrate specificity, regiospecificity, and processivity in glycoside hydrolase family 74. J.Biol.Chem., 294, 2019
6OZG	Crystal structure of Thermotoga maritima (Tm) Endonuclease V (E89Q) in complex with a 12mer DNA containing an inosine followed by a ribo-adenosine Descriptor: 1,2-ETHANEDIOL, DNA/RNA (5'-D(*AP*AP*TP*GP*A)-R(P*A)-D(P*GP*AP*T)-R(P*NP*N)-D(P*T)-3'), Endonuclease V, ... Authors: Samara, N.L, Yang, W. Deposit date: 2019-05-15 Release date: 2019-09-04 Last modified: 2023-10-11 Method: X-RAY DIFFRACTION (1.93 Å) Cite: Evolution of Inosine-Specific Endonuclease V from Bacterial DNase to Eukaryotic RNase. Mol.Cell, 76, 2019
6OZN	Crystal structure of Mus musculus (Mm) Endonuclease V in complex with a 23mer RNA oligo containing an inosine after a 15 min soak in 10 mM Mn2+ Descriptor: 1,2-ETHANEDIOL, DNA/RNA (5'-R(P*CP*GP*GP*UP*AP*AP*CP*CP*C)-D(P*I)-R(P*AP*UP*AP*UP*GP*CP*AP*UP*GP*CP*AP*UP*U)-3'), Endonuclease V, ... Authors: Samara, N.L, Yang, W. Deposit date: 2019-05-15 Release date: 2019-09-04 Last modified: 2024-03-13 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Evolution of Inosine-Specific Endonuclease V from Bacterial DNase to Eukaryotic RNase. Mol.Cell, 76, 2019
3LL2	Monomeric Griffithsin in Complex with a High-Mannose Branched Carbohydrate Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, Griffithsin, ... Authors: Moulaei, T, Wlodawer, A. Deposit date: 2010-01-28 Release date: 2010-10-06 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (0.97 Å) Cite: Monomerization of viral entry inhibitor griffithsin elucidates the relationship between multivalent binding to carbohydrates and anti-HIV activity. Structure, 18, 2010
6ZEP	Flavourzyme Leucine Aminopeptidase A proenzyme Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Leucine aminopeptidase A, ... Authors: Watson, K.A, Baltulionis, G. Deposit date: 2020-06-16 Release date: 2021-06-16 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (1.61 Å) Cite: The role of propeptide-mediated autoinhibition and intermolecular chaperone in the maturation of cognate catalytic domain in leucine aminopeptidase. J.Struct.Biol., 213, 2021
3L5X	Crystal structure of the complex between IL-13 and H2L6 FAB Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, GLYCEROL, H2L6 HEAVY CHAIN, ... Authors: Teplyakov, A, Obmolova, G, Malia, T, Gilliland, G.L. Deposit date: 2009-12-22 Release date: 2010-04-14 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Human framework adaptation of a mouse anti-human IL-13 antibody. J.Mol.Biol., 398, 2010
3L5W	Crystal structure of the complex between IL-13 and C836 FAB Descriptor: C836 HEAVY CHAIN, C836 LIGHT CHAIN, GLYCEROL, ... Authors: Teplyakov, A, Obmolova, G, Malia, T, Gilliland, G.L. Deposit date: 2009-12-22 Release date: 2010-04-14 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (2 Å) Cite: Human framework adaptation of a mouse anti-human IL-13 antibody. J.Mol.Biol., 398, 2010
3L7F	Structure of IL-13 antibody H2L6, A humanized variant OF C836 Descriptor: CALCIUM ION, H2L6 HEAVY CHAIN, H2L6 LIGHT CHAIN, ... Authors: Teplyakov, A, Obmolova, G, Malia, T, Gilliland, G.L. Deposit date: 2009-12-28 Release date: 2010-11-10 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (2.6 Å) Cite: Human framework adaptation of a mouse anti-human IL-13 antibody. J.Mol.Biol., 398, 2010
7A0T	Crystal structure of kievitone hydratase from Nectria haematococca (P21 SG) Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CrtC domain-containing protein, IMIDAZOLE, ... Authors: Pavkov-Keller, T, Gruber, K. Deposit date: 2020-08-10 Release date: 2021-08-18 Method: X-RAY DIFFRACTION (2 Å) Cite: Structural analysis and reaction mechanism of kievitone hydratase from Nectria haematococca to be published
3JBK	Cryo-EM reconstruction of the metavinculin-actin interface Descriptor: ADENOSINE-5'-DIPHOSPHATE, Actin, alpha skeletal muscle, ... Authors: Kim, L.Y, Thompson, P.M, Lee, H.T, Pershad, M, Campbell, S.L, Alushin, G.M. Deposit date: 2015-09-03 Release date: 2015-11-04 Last modified: 2024-02-21 Method: ELECTRON MICROSCOPY (8.2 Å) Cite: The Structural Basis of Actin Organization by Vinculin and Metavinculin. J.Mol.Biol., 428, 2016
3JBI	MDFF model of the vinculin tail domain bound to F-actin Descriptor: ADENOSINE-5'-DIPHOSPHATE, Actin, alpha skeletal muscle, ... Authors: Kim, L.Y, Thompson, P.M, Lee, H.T, Pershad, M, Campbell, S.L, Alushin, G.M. Deposit date: 2015-09-02 Release date: 2015-11-04 Last modified: 2024-02-21 Method: ELECTRON MICROSCOPY (8.5 Å) Cite: The Structural Basis of Actin Organization by Vinculin and Metavinculin. J.Mol.Biol., 428, 2016
6ZYB	Sarcin-Ricin Loop RNA from Ecoli with a C2667-2'-OCF3 modification Descriptor: Sarcin-Ricin Loop RNA from Ecoli with a C2667-2'-OCF3 modification Authors: Ennifar, E. Deposit date: 2020-07-31 Release date: 2020-12-16 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (0.9 Å) Cite: 2'- O -Trifluoromethylated RNA - a powerful modification for RNA chemistry and NMR spectroscopy. Chem Sci, 11, 2020
7AD3	Class D GPCR Ste2 dimer coupled to two G proteins Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Alpha-factor mating pheromone, CHOLESTEROL HEMISUCCINATE, ... Authors: Velazhahan, V, Tate, C. Deposit date: 2020-09-14 Release date: 2020-12-09 Last modified: 2021-01-13 Method: ELECTRON MICROSCOPY (3.5 Å) Cite: Structure of the class D GPCR Ste2 dimer coupled to two G proteins. Nature, 589, 2021
7AUW	Inhibitory complex of human meprin beta with mouse fetuin-B. Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Fetuin-B, ... Authors: Eckhard, U, Gomis-Ruth, F.X. Deposit date: 2020-11-03 Release date: 2021-04-14 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (2.8 Å) Cite: The crystal structure of a 250-kDa heterotetrameric particle explains inhibition of sheddase meprin beta by endogenous fetuin-B. Proc.Natl.Acad.Sci.USA, 118, 2021
7AKJ	Structure of the SARS-CoV spike glycoprotein in complex with the 47D11 neutralizing antibody Fab fragment Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ... Authors: Fedry, J, Hurdiss, D.L, Wang, C, Li, W, Obal, G, Drulyte, I, Howes, S.C, van Kuppeveld, F.J.M, Foerster, F, Bosch, B.J. Deposit date: 2020-10-01 Release date: 2021-05-19 Last modified: 2021-06-16 Method: ELECTRON MICROSCOPY (3.8 Å) Cite: Structural insights into the cross-neutralization of SARS-CoV and SARS-CoV-2 by the human monoclonal antibody 47D11. Sci Adv, 7, 2021
6ZPU	Crystal structure of Angiotensin-1 converting enzyme C-domain with inserted symmetry molecule C-terminus. Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, ... Authors: Cozier, G.E, Acharya, K.R. Deposit date: 2020-07-09 Release date: 2020-10-28 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (2 Å) Cite: Angiotensin-converting enzyme open for business: structural insights into the subdomain dynamics. Febs J., 288, 2021
6ZXZ	Sarcin-Ricin Loop RNA from Ecoli with a A2670-2'-OCF3 modification Descriptor: POTASSIUM ION, SODIUM ION, Sarcin-Ricin Loop RNA from Ecoli with a A2670-2'-OCF3 modification Authors: Ennifar, E. Deposit date: 2020-07-30 Release date: 2020-12-16 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (2.44 Å) Cite: 2'- O -Trifluoromethylated RNA - a powerful modification for RNA chemistry and NMR spectroscopy. Chem Sci, 11, 2020
3MCK	Crystal structure of anti-beta-amyloid antibody C705 Descriptor: ACETATE ION, C705 MONOCLONAL HEAVY CHAIN, C705 MONOCLONAL LIGHT CHAIN Authors: Teplyakov, A, Obmolova, G, Gilliland, G.L. Deposit date: 2010-03-29 Release date: 2011-02-09 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Antibody modeling assessment. Proteins, 79, 2011

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