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2JZI
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BU of 2jzi by Molmil
Structure of Calmodulin complexed with the Calmodulin Binding Domain of Calcineurin
分子名称: CALCIUM ION, Calmodulin, Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform
著者Chyan, C, Huang, J, Irene, D, Lin, T.
登録日2008-01-09
公開日2009-01-13
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Structure of Calmodulin complexed with the Calmodulin Binding Domain of Calcineurin
To be Published
3V79
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BU of 3v79 by Molmil
Structure of human Notch1 transcription complex including CSL, RAM, ANK, and MAML-1 on HES-1 promoter DNA sequence
分子名称: DNA 5'-D(*GP*TP*TP*AP*CP*TP*GP*TP*GP*GP*GP*AP*AP*AP*GP*AP*AP*A)-3', DNA 5'-D(*TP*TP*TP*CP*TP*TP*TP*CP*CP*CP*AP*CP*AP*GP*TP*AP*AP*C)-3', Mastermind-like protein 1, ...
著者Nam, Y, Sliz, P, Blacklow, S.
登録日2011-12-20
公開日2012-02-15
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (3.85 Å)
主引用文献Conformational Locking upon Cooperative Assembly of Notch Transcription Complexes.
Structure, 20, 2012
3UV9
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BU of 3uv9 by Molmil
Structure of the rhesus monkey TRIM5alpha deltav1 PRYSPRY domain
分子名称: Tripartite motif-containing protein 5
著者Biris, N, Yang, Y, Taylor, A.B, Tomashevskii, A, Guo, M, Hart, P.J, Diaz-Griffero, F, Ivanov, D.
登録日2011-11-29
公開日2012-08-08
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.549 Å)
主引用文献Structure of the rhesus monkey TRIM5alpha PRYSPRY domain, the HIV capsid recognition module.
Proc.Natl.Acad.Sci.USA, 109, 2012
3V1B
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BU of 3v1b by Molmil
Crystal structure of de novo designed MID1-apo2
分子名称: Computational design, MID1-apo2, GLYCEROL
著者Der, B.S, Machius, M, Miley, M.J, Kuhlman, B.
登録日2011-12-09
公開日2012-01-11
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.28 Å)
主引用文献Metal-mediated affinity and orientation specificity in a computationally designed protein homodimer.
J.Am.Chem.Soc., 134, 2012
2CXA
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BU of 2cxa by Molmil
Crystal structure of Leucyl/phenylalanyl-tRNA protein transferase from Escherichia coli
分子名称: Leucyl/phenylalanyl-tRNA-protein transferase
著者Kato-Murayama, M, Bessho, Y, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-06-28
公開日2005-12-28
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献The crystal structure of leucyl/phenylalanyl-tRNA-protein transferase from Escherichia coli
Protein Sci., 16, 2007
1WZE
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BU of 1wze by Molmil
Structural basis for alteration of cofactor specificity of Malate dehydrogenase from Thermus flavus
分子名称: Malate dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
著者Tomita, T, Fushinobu, S, Kuzuyama, T, Nishiyama, M.
登録日2005-03-04
公開日2006-03-14
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural basis for alteration of cofactor specificity of malate dehydrogenase from Thermus flavus
to be published
6S5B
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BU of 6s5b by Molmil
Non-square conformation of KtrA R16K mutant ring with bound ADP
分子名称: ADENOSINE-5'-DIPHOSPHATE, Ktr system potassium uptake protein A
著者Teixeira-Duarte, C.M, Fonseca, F, Morais-Cabral, J.H.
登録日2019-07-01
公開日2020-01-08
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (3.052 Å)
主引用文献Activation of a nucleotide-dependent RCK domain requires binding of a cation cofactor to a conserved site.
Elife, 8, 2019
6UMJ
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BU of 6umj by Molmil
Crystal structure of erenumab Fab-c
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 1,3-BUTANEDIOL, erenumab Fab heavy chain, ...
著者Mohr, C.
登録日2019-10-09
公開日2020-02-12
最終更新日2020-02-26
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Molecular Insight into Recognition of the CGRPR Complex by Migraine Prevention Therapy Aimovig (Erenumab).
Cell Rep, 30, 2020
6UMG
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BU of 6umg by Molmil
Crystal structure of erenumab Fab bound to the extracellular domain of CGRP receptor
分子名称: Calcitonin gene-related peptide type 1 receptor, Receptor activity-modifying protein 1, erenumab Fab heavy chain, ...
著者Mohr, C.
登録日2019-10-09
公開日2020-02-12
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Molecular Insight into Recognition of the CGRPR Complex by Migraine Prevention Therapy Aimovig (Erenumab).
Cell Rep, 30, 2020
6M0A
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BU of 6m0a by Molmil
The heme-bound structure of the chloroplast protein At3g03890
分子名称: AT3G03890 protein, AZIDE ION, PROTOPORPHYRIN IX CONTAINING FE
著者Wang, J, Liu, L.
登録日2020-02-20
公開日2020-12-16
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献The Arabidopsis locus AT3G03890 encodes a dimeric beta-barrel protein implicated in heme degradation.
Biochem.J., 2020
6S7R
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BU of 6s7r by Molmil
Non-square conformations of KtrA R16A mutant rings with bound ADP
分子名称: ADENOSINE-5'-DIPHOSPHATE, Ktr system potassium uptake protein A
著者Teixeira-Duarte, C.M, Fonseca, F, Morais-Cabral, J.H.
登録日2019-07-05
公開日2020-01-08
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (3.73 Å)
主引用文献Activation of a nucleotide-dependent RCK domain requires binding of a cation cofactor to a conserved site.
Elife, 8, 2019
2JO8
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BU of 2jo8 by Molmil
Solution structure of C-terminal domain of human mammalian sterile 20-like kinase 1 (MST1)
分子名称: Serine/threonine-protein kinase 4
著者Hwang, E, Ryu, K.-S, Paakkonen, K, Guntert, P, Cheong, H.-K, Lim, D.-S, Lee, J.O, Jeon, Y.H, Cheong, C.
登録日2007-02-26
公開日2007-05-15
最終更新日2023-12-20
実験手法SOLUTION NMR
主引用文献Structural insight into dimeric interaction of the SARAH domains from Mst1 and RASSF family proteins in the apoptosis pathway
Proc.Natl.Acad.Sci.Usa, 104, 2007
5I72
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BU of 5i72 by Molmil
Crystal structure of the oligomeric form of the Lassa virus matrix protein Z
分子名称: RING finger protein Z, ZINC ION
著者Hastie, K, Zandonatti, M, Liu, T, Li, S, Woods Jr, V, Saphire, E.O.
登録日2016-02-16
公開日2016-03-09
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Crystal Structure of the Oligomeric Form of Lassa Virus Matrix Protein Z.
J.Virol., 90, 2016
6M3D
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BU of 6m3d by Molmil
X-ray crystal structure of tandemly connected engrailed homeodomains (EHD) with R53A mutations and DNA complex
分子名称: DNA (5'-D(*GP*GP*AP*TP*TP*AP*GP*GP*AP*TP*TP*A)-3'), DNA (5'-D(*TP*AP*AP*TP*CP*CP*TP*AP*AP*TP*CP*C)-3'), SODIUM ION, ...
著者Sunami, T, Hirano, Y, Tamada, T, Kono, H.
登録日2020-03-03
公開日2020-09-16
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structural basis for designing an array of engrailed homeodomains.
Acta Crystallogr D Struct Biol, 76, 2020
7JRP
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BU of 7jrp by Molmil
Plant Mitochondrial complex SC III2+IV from Vigna radiata
分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOETHANOLAMINE, Alpha-MPP, ...
著者Maldonado, M, Letts, J.A.
登録日2020-08-12
公開日2021-01-20
最終更新日2021-02-03
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Atomic structures of respiratory complex III 2 , complex IV, and supercomplex III 2 -IV from vascular plants.
Elife, 10, 2021
6UMA
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BU of 6uma by Molmil
Crystal structure of the TRIM7 B30.2 domain at 1.6 angstrom resolution
分子名称: E3 ubiquitin-protein ligase TRIM7, GLYCEROL, MALONATE ION
著者Munoz Sosa, C.J, Carrizo, M.E.
登録日2019-10-09
公開日2021-04-14
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal structure and mutational analysis of the human TRIM7 B30.2 domain provide insights into the molecular basis of its binding to glycogenin-1.
J.Biol.Chem., 296, 2021
6UMB
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BU of 6umb by Molmil
Crystal structure of TRIM7 B30.2 domain at 1.8 angstrom resolution
分子名称: BETA-MERCAPTOETHANOL, E3 ubiquitin-protein ligase TRIM7, MALONATE ION
著者Munoz Sosa, C.J, Carrizo, M.E.
登録日2019-10-09
公開日2021-04-14
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure and mutational analysis of the human TRIM7 B30.2 domain provide insights into the molecular basis of its binding to glycogenin-1.
J.Biol.Chem., 296, 2021
2JUN
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BU of 2jun by Molmil
Structure of the MID1 tandem B-boxes reveals an interaction reminiscent of intermolecular RING heterodimers
分子名称: Midline-1, ZINC ION
著者Tao, H, Singireddy, S, Jakkidi, M, Simmons, B.N, Short, K.M, Cox, T.C, Massiah, M.A.
登録日2007-08-31
公開日2008-03-04
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Structure of the MID1 Tandem B-Boxes Reveals an Interaction Reminiscent of Intermolecular Ring Heterodimers
Biochemistry, 47, 2008
6M90
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BU of 6m90 by Molmil
Monophosphorylated pSer33 b-Catenin peptide, b-TrCP/Skp1, NRX-2776 ternary complex
分子名称: 2-(2-fluorophenoxy)-3-{[2-oxo-6-(trifluoromethyl)-1,2-dihydropyridine-3-carbonyl]amino}benzoic acid, Catenin beta-1, F-box/WD repeat-containing protein 1A, ...
著者Simonetta, K.R, Clifton, M.C, Walter, R.L, Ranieri, G.M, Carter, J.J.
登録日2018-08-22
公開日2019-04-03
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Prospective discovery of small molecule enhancers of an E3 ligase-substrate interaction.
Nat Commun, 10, 2019
7ZH4
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BU of 7zh4 by Molmil
USP1 bound to ML323 and ubiquitin conjugated to FANCD2 (focused refinement)
分子名称: 5-methyl-2-(2-propan-2-ylphenyl)-~{N}-[[4-(1,2,3-triazol-1-yl)phenyl]methyl]pyrimidin-4-amine, Ubiquitin carboxyl-terminal hydrolase 1, Ubiquitin-60S ribosomal protein L40, ...
著者Rennie, M.L, Walden, H.
登録日2022-04-05
公開日2022-10-12
実験手法ELECTRON MICROSCOPY (2.49 Å)
主引用文献Cryo-EM reveals a mechanism of USP1 inhibition through a cryptic binding site.
Sci Adv, 8, 2022
6LPT
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BU of 6lpt by Molmil
Crystal structure of human D-2-hydroxyglutarate dehydrogenase in complex with D-lactate (D-LAC)
分子名称: D-2-hydroxyglutarate dehydrogenase, mitochondrial, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Yang, J, Zhu, H, Ding, J.
登録日2020-01-12
公開日2021-01-13
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.621 Å)
主引用文献Structure, substrate specificity, and catalytic mechanism of human D-2-HGDH and insights into pathogenicity of disease-associated mutations.
Cell Discov, 7, 2021
6MCQ
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BU of 6mcq by Molmil
L. pneumophila effector kinase LegK7 in complex with human MOB1A
分子名称: DI(HYDROXYETHYL)ETHER, HEXAETHYLENE GLYCOL, LegK7, ...
著者Beyrakhova, K.A, Xu, C, Boniecki, M.T, Cygler, M.
登録日2018-09-01
公開日2019-09-04
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.57 Å)
主引用文献TheLegionellakinase LegK7 exploits the Hippo pathway scaffold protein MOB1A for allostery and substrate phosphorylation.
Proc.Natl.Acad.Sci.USA, 117, 2020
6MDP
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BU of 6mdp by Molmil
The D1 and D2 domain rings of NSF engaging the SNAP-25 N-terminus within the 20S supercomplex (focused refinement on D1/D2 rings, class 2)
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Synaptosomal-associated protein 25, ...
著者White, K.I, Zhao, M, Brunger, A.T.
登録日2018-09-04
公開日2018-09-19
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Structural principles of SNARE complex recognition by the AAA+ protein NSF.
Elife, 7, 2018
6A9T
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BU of 6a9t by Molmil
Crystal structure of Icp55 from Saccharomyces cerevisiae (N-terminal 58 residues deletion)
分子名称: GLYCINE, Intermediate cleaving peptidase 55, MANGANESE (II) ION, ...
著者Singh, R, Kumar, A, Goyal, V.D, Makde, R.D.
登録日2018-07-16
公開日2019-01-16
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Crystal structures and biochemical analyses of intermediate cleavage peptidase: role of dynamics in enzymatic function.
FEBS Lett., 593, 2019
6AA7
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BU of 6aa7 by Molmil
Fluorescent protein from Acropora digitifera
分子名称: Fluorescent protein
著者Kim, S.E, Hwang, K.Y, Nam, K.H.
登録日2018-07-17
公開日2018-08-22
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Spectral and structural analysis of a red fluorescent protein from Acropora digitifera.
Protein Sci., 28, 2019

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