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PDB: 33 results

7AY1
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BU of 7ay1 by Molmil
Cryo-EM structure of USP1-UAF1 bound to mono-ubiquitinated FANCD2, and FANCI
Descriptor: DNA (61-MER), Fanconi anemia group D2 protein, Fanconi anemia group I protein, ...
Authors:Rennie, M.L, Arkinson, C, Walden, H.
Deposit date:2020-11-10
Release date:2021-03-24
Last modified:2022-07-27
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Structural basis of FANCD2 deubiquitination by USP1-UAF1.
Nat.Struct.Mol.Biol., 28, 2021
9FCJ
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BU of 9fcj by Molmil
USP1 bound to ML323 and ubiquitin conjugated to FANCD2 (ordered subset, focused refinement)
Descriptor: 5-methyl-2-(2-propan-2-ylphenyl)-~{N}-[[4-(1,2,3-triazol-1-yl)phenyl]methyl]pyrimidin-4-amine, Polyubiquitin-C, Ubiquitin carboxyl-terminal hydrolase 1, ...
Authors:Rennie, M.L, Gundogdu, M, Walden, H.
Deposit date:2024-05-15
Release date:2024-09-04
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Structural and Biochemical Insights into the Mechanism of Action of the Clinical USP1 Inhibitor, KSQ-4279.
J.Med.Chem., 2024
9FCI
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BU of 9fci by Molmil
USP1 bound to KSQ-4279 and ubiquitin conjugated to FANCD2 (focused refinement)
Descriptor: 6-(4-cyclopropyl-6-methoxy-pyrimidin-5-yl)-1-[[4-[1-propan-2-yl-4-(trifluoromethyl)imidazol-2-yl]phenyl]methyl]pyrazolo[3,4-d]pyrimidine, Polyubiquitin-C, Ubiquitin carboxyl-terminal hydrolase 1, ...
Authors:Rennie, M.L, Gundogdu, M, Walden, H.
Deposit date:2024-05-15
Release date:2024-09-04
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structural and Biochemical Insights into the Mechanism of Action of the Clinical USP1 Inhibitor, KSQ-4279.
J.Med.Chem., 2024
5LYC
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BU of 5lyc by Molmil
Cytochrome c in complex with phosphonato-calix[6]arene
Descriptor: Cytochrome c iso-1, HEME C, SULFATE ION, ...
Authors:Rennie, M.L, Crowley, P.B.
Deposit date:2016-09-27
Release date:2017-05-10
Last modified:2019-09-25
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Protein Dimerization on a Phosphonated Calix[6]arene Disc.
Angew. Chem. Int. Ed. Engl., 56, 2017
8A9J
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BU of 8a9j by Molmil
Cryo-EM structure of USP1-UAF1 bound to FANCI and mono-ubiquitinated FANCD2 without ML323 (consensus reconstruction)
Descriptor: DNA (61-MER), Fanconi anemia group D2 protein, Fanconi anemia group I protein, ...
Authors:Rennie, M.L, Walden, H.
Deposit date:2022-06-28
Release date:2022-10-12
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Cryo-EM reveals a mechanism of USP1 inhibition through a cryptic binding site.
Sci Adv, 8, 2022
8A9K
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BU of 8a9k by Molmil
Cryo-EM structure of USP1-UAF1 bound to FANCI and mono-ubiquitinated FANCD2 with ML323 (consensus reconstruction)
Descriptor: 5-methyl-2-(2-propan-2-ylphenyl)-~{N}-[[4-(1,2,3-triazol-1-yl)phenyl]methyl]pyrimidin-4-amine, DNA (61-MER), Fanconi anemia group D2 protein, ...
Authors:Rennie, M.L, Walden, H.
Deposit date:2022-06-28
Release date:2022-10-12
Last modified:2023-03-01
Method:ELECTRON MICROSCOPY (2.85 Å)
Cite:Cryo-EM reveals a mechanism of USP1 inhibition through a cryptic binding site.
Sci Adv, 8, 2022
7ZH4
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BU of 7zh4 by Molmil
USP1 bound to ML323 and ubiquitin conjugated to FANCD2 (focused refinement)
Descriptor: 5-methyl-2-(2-propan-2-ylphenyl)-~{N}-[[4-(1,2,3-triazol-1-yl)phenyl]methyl]pyrimidin-4-amine, Ubiquitin carboxyl-terminal hydrolase 1, Ubiquitin-60S ribosomal protein L40, ...
Authors:Rennie, M.L, Walden, H.
Deposit date:2022-04-05
Release date:2022-10-12
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (2.49 Å)
Cite:Cryo-EM reveals a mechanism of USP1 inhibition through a cryptic binding site.
Sci Adv, 8, 2022
7ZH3
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BU of 7zh3 by Molmil
USP1 bound to ubiquitin conjugated to FANCD2 (focused refinement)
Descriptor: Ubiquitin carboxyl-terminal hydrolase 1, Ubiquitin-60S ribosomal protein L40, ZINC ION
Authors:Rennie, M.L, Walden, H.
Deposit date:2022-04-05
Release date:2022-10-12
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (2.5 Å)
Cite:Cryo-EM reveals a mechanism of USP1 inhibition through a cryptic binding site.
Sci Adv, 8, 2022
4P4T
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BU of 4p4t by Molmil
GDP-bound stalkless-MxA
Descriptor: GUANOSINE-5'-DIPHOSPHATE, Interferon-induced GTP-binding protein Mx1, SULFATE ION
Authors:Rennie, M.L, McKelvie, S.A, Bulloch, E.M, Kingston, R.L.
Deposit date:2014-03-13
Release date:2014-10-22
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Transient Dimerization of Human MxA Promotes GTP Hydrolysis, Resulting in a Mechanical Power Stroke.
Structure, 22, 2014
4P4S
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BU of 4p4s by Molmil
GMPPCP-bound stalkless-MxA
Descriptor: Interferon-induced GTP-binding protein Mx1, MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER
Authors:Rennie, M.L, McKelvie, S.A, Bulloch, E.M, Kingston, R.L.
Deposit date:2014-03-13
Release date:2014-10-22
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Transient Dimerization of Human MxA Promotes GTP Hydrolysis, Resulting in a Mechanical Power Stroke.
Structure, 22, 2014
4P4U
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BU of 4p4u by Molmil
Nucleotide-free stalkless-MxA
Descriptor: Interferon-induced GTP-binding protein Mx1, SULFATE ION
Authors:Rennie, M.L, McKelvie, S.A, Bulloch, E.M, Kingston, R.L.
Deposit date:2014-03-13
Release date:2014-11-05
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Transient Dimerization of Human MxA Promotes GTP Hydrolysis, Resulting in a Mechanical Power Stroke.
Structure, 22, 2014
6GDA
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BU of 6gda by Molmil
Cytochrome c in complex with Sulfonato-calix[8]arene, P43212 form soaked with Spermine
Descriptor: Cytochrome c iso-1, HEME C, SPERMINE, ...
Authors:Rennie, M.L, Fox, G.C, Crowley, P.B.
Deposit date:2018-04-23
Release date:2019-05-01
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Tuning Protein Frameworks via Auxiliary Supramolecular Interactions.
Acs Nano, 13, 2019
6GD9
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BU of 6gd9 by Molmil
Cytochrome c in complex with Sulfonato-calix[8]arene, P43212 form
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Cytochrome c iso-1, HEME C, ...
Authors:Rennie, M.L, Fox, G.C, Crowley, P.B.
Deposit date:2018-04-23
Release date:2018-08-29
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Auto-regulated Protein Assembly on a Supramolecular Scaffold.
Angew. Chem. Int. Ed. Engl., 57, 2018
6GD6
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BU of 6gd6 by Molmil
Cytochrome c in complex with Sulfonato-calix[8]arene, H3 form with ammonium sulfate
Descriptor: Cytochrome c iso-1, HEME C, SULFATE ION, ...
Authors:Rennie, M.L, Fox, G.C, Crowley, P.B.
Deposit date:2018-04-23
Release date:2018-08-29
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Auto-regulated Protein Assembly on a Supramolecular Scaffold.
Angew. Chem. Int. Ed. Engl., 57, 2018
6GD8
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BU of 6gd8 by Molmil
Cytochrome c in complex with Sulfonato-calix[8]arene, P31 form
Descriptor: Cytochrome c iso-1, HEME C, sulfonato-calix[8]arene
Authors:Rennie, M.L, Fox, G.C, Crowley, P.B.
Deposit date:2018-04-23
Release date:2018-08-29
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Auto-regulated Protein Assembly on a Supramolecular Scaffold.
Angew. Chem. Int. Ed. Engl., 57, 2018
6GD7
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BU of 6gd7 by Molmil
Cytochrome c in complex with Sulfonato-calix[8]arene, H3 form with PEG
Descriptor: Cytochrome c iso-1, GLYCEROL, HEME C, ...
Authors:Rennie, M.L, Fox, G.C, Crowley, P.B.
Deposit date:2018-04-23
Release date:2018-08-29
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Auto-regulated Protein Assembly on a Supramolecular Scaffold.
Angew. Chem. Int. Ed. Engl., 57, 2018
6Y0J
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BU of 6y0j by Molmil
Cytochrome c in complex with phosphonato-calix[6]arene and sulfonato-calix[8]arene
Descriptor: Cytochrome c iso-1, HEME C, phosphonato-calix[6]arene, ...
Authors:Engilberge, S, Rennie, M.L, Crowley, P.B.
Deposit date:2020-02-07
Release date:2021-02-17
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Protein-macrocycle framework engineering: supramolecular copolymerisation with two disparate calixarenes
Supramolecular Chemistry, 2021
5NCV
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BU of 5ncv by Molmil
Crystal Structure of Cytochrome c in complex with p-Methylphosphonatocalix[4]arene
Descriptor: CHLORIDE ION, Cytochrome c iso-1, HEME C, ...
Authors:Alex, J.M, Rennie, M.L, Crowley, P.B.
Deposit date:2017-03-06
Release date:2018-03-14
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Phosphonated Calixarene as a ""Molecular Glue"" for Protein Crystallization
Cryst.Growth Des., 18, 2018
7AY0
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BU of 7ay0 by Molmil
Crystal structure of truncated USP1-UAF1
Descriptor: Ubiquitin carboxyl-terminal hydrolase 1, WD repeat-containing protein 48, ZINC ION
Authors:Arkinson, C, Rennie, M.L, Walden, H.
Deposit date:2020-11-10
Release date:2021-03-24
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Structural basis of FANCD2 deubiquitination by USP1-UAF1.
Nat.Struct.Mol.Biol., 28, 2021
7AY2
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BU of 7ay2 by Molmil
Crystal structure of truncated USP1-UAF1 reacted with ubiquitin-prg
Descriptor: Polyubiquitin-B, Ubiquitin carboxyl-terminal hydrolase 1, WD repeat-containing protein 48, ...
Authors:Arkinson, C, Rennie, M.L, Walden, H.
Deposit date:2020-11-10
Release date:2021-03-24
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structural basis of FANCD2 deubiquitination by USP1-UAF1.
Nat.Struct.Mol.Biol., 28, 2021
6F7Y
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BU of 6f7y by Molmil
Crystal structure of dimethylated RSL, cucurbituril-free form
Descriptor: Fucose-binding lectin protein, GLYCEROL
Authors:Guagnini, F, Rennie, M.L, Crowley, P.B.
Deposit date:2017-12-12
Release date:2018-05-30
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Cucurbit[7]uril-Dimethyllysine Recognition in a Model Protein.
Angew. Chem. Int. Ed. Engl., 57, 2018
6F7X
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BU of 6f7x by Molmil
Crystal structure of dimethylated RSL - cucurbit[7]uril complex, F432 form
Descriptor: Fucose-binding lectin protein, GLYCEROL, cucurbit[7]uril, ...
Authors:Guagnini, F, Rennie, M.L, Crowley, P.B.
Deposit date:2017-12-12
Release date:2018-05-30
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.42 Å)
Cite:Cucurbit[7]uril-Dimethyllysine Recognition in a Model Protein.
Angew. Chem. Int. Ed. Engl., 57, 2018
6F37
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BU of 6f37 by Molmil
Fusion protein of RSL and trimeric coiled coil
Descriptor: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, Nano3,Fucose-binding lectin protein, beta-D-mannopyranose
Authors:Wronska, M.A, Rennie, M.L, Crowley, P.B.
Deposit date:2017-11-28
Release date:2018-12-12
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Fusion protein of RSL and trimeric coiled coil
To Be Published
6F7W
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BU of 6f7w by Molmil
Crystal structure of dimethylated RSL - cucurbit[7]uril complex, C2221 Form
Descriptor: Fucose-binding lectin protein, GLYCEROL, SODIUM ION, ...
Authors:Guagnini, F, Rennie, M.L, Crowley, P.B.
Deposit date:2017-12-12
Release date:2018-05-30
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.28 Å)
Cite:Cucurbit[7]uril-Dimethyllysine Recognition in a Model Protein.
Angew. Chem. Int. Ed. Engl., 57, 2018
5KPF
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BU of 5kpf by Molmil
Crystal structure of cytochrome c - Phenyl-trisulfonatocalix[4]arene complex
Descriptor: Cytochrome c iso-1, HEME C, NITRATE ION, ...
Authors:Doolan, A.M, Rennie, M.L, Crowley, P.B.
Deposit date:2016-07-04
Release date:2017-07-12
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.698 Å)
Cite:Protein Recognition by Functionalized Sulfonatocalix[4]arenes.
Chemistry, 24, 2018

 

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