PDB: 1247 件ウェブページステータス検索Chemie searchBIRD

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7FBC	De novo design protein D22 with MBP tag 分子名称: Maltodextrin-binding protein,De novo design protein D22 著者 Bin, H. 登録日 2021-07-09 公開日 2021-12-22 最終更新日 2024-05-29 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 A backbone-centred energy function of neural networks for protein design. Nature, 602, 2022
7EOY	Engineered Hepatitis B virus core antigen T=3 分子名称: Capsid protein,Immunoglobulin G-binding protein A 著者 Jeong, H, Heo, Y, Yoo, Y, Ryu, B, Yun, J, Cho, H, Lee, W. 登録日 2021-04-24 公開日 2021-09-01 最終更新日 2022-02-16 実験手法 ELECTRON MICROSCOPY (3.6 Å) 主引用文献 Structural and Functional Characterizations of Cancer Targeting Nanoparticles Based on Hepatitis B Virus Capsid. Int J Mol Sci, 22, 2021
7FDJ	Engineered Hepatitis B virus core antigen with short linker T=4 分子名称: Capsid protein,Immunoglobulin G-binding protein A 著者 Jeong, H, Heo, Y, Yoo, Y, Ryu, B, Yun, J, Cho, H, Lee, W. 登録日 2021-07-16 公開日 2021-09-01 最終更新日 2024-06-12 実験手法 ELECTRON MICROSCOPY (4.4 Å) 主引用文献 Structural and Functional Characterizations of Cancer Targeting Nanoparticles Based on Hepatitis B Virus Capsid. Int J Mol Sci, 22, 2021
7EP6	Engineered Hepatitis B virus core antigen T=4 分子名称: Capsid protein,Immunoglobulin G-binding protein A 著者 Jeong, H, Heo, Y, Yoo, Y, Ryu, B, Yun, J, Cho, H, Lee, W. 登録日 2021-04-26 公開日 2021-09-01 最終更新日 2022-02-16 実験手法 ELECTRON MICROSCOPY (3.86 Å) 主引用文献 Structural and Functional Characterizations of Cancer Targeting Nanoparticles Based on Hepatitis B Virus Capsid. Int J Mol Sci, 22, 2021
7CY8	Crystal Structure of CMD1 in complex with 5mC-DNA and vitamin C 分子名称: 1,2-ETHANEDIOL, ASCORBIC ACID, DNA (5'-D(P*(5CM)P*GP*CP*GP*CP*GP*GP*GP*A)-3'), ... 著者 Li, W, Zhang, T, Sun, M, Ding, J. 登録日 2020-09-03 公開日 2020-12-30 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Molecular mechanism for vitamin C-derived C 5 -glyceryl-methylcytosine DNA modification catalyzed by algal TET homologue CMD1. Nat Commun, 12, 2021
7CY4	Crystal Structure of CMD1 in apo form 分子名称: CITRIC ACID, FE (III) ION, Maltodextrin-binding protein,5-methylcytosine-modifying enzyme 1 著者 Li, W, Zhang, T, Sun, M, Ding, J. 登録日 2020-09-03 公開日 2020-12-30 最終更新日 2024-03-27 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Molecular mechanism for vitamin C-derived C 5 -glyceryl-methylcytosine DNA modification catalyzed by algal TET homologue CMD1. Nat Commun, 12, 2021
7F6H	Cryo-EM structure of human bradykinin receptor BK2R in complex Gq proteins and bradykinin 分子名称: Bradykinin, Bradykinin receptor BK2R, CHOLESTEROL, ... 著者 Shen, J, Zhang, D, Fu, Y, Chen, A, Zhang, H. 登録日 2021-06-25 公開日 2022-01-05 最終更新日 2023-01-18 実験手法 ELECTRON MICROSCOPY (2.9 Å) 主引用文献 Cryo-EM structures of human bradykinin receptor-G q proteins complexes. Nat Commun, 13, 2022
7F6I	Cryo-EM structure of human bradykinin receptor BK2R in complex Gq proteins and kallidin 分子名称: Bradykinin receptor BK2R, CHOLESTEROL, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ... 著者 Shen, J, Zhang, D, Fu, Y, Chen, A, Zhang, H. 登録日 2021-06-25 公開日 2022-01-05 最終更新日 2023-01-18 実験手法 ELECTRON MICROSCOPY (2.8 Å) 主引用文献 Cryo-EM structures of human bradykinin receptor-G q proteins complexes. Nat Commun, 13, 2022
7F6G	Cryo-EM structure of human angiotensin receptor AT1R in complex Gq proteins and Sar1-AngII 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin receptor AT1R, CHOLESTEROL, ... 著者 Zhang, D, Xu, L, Zhan, Y, Guo, J, Zhang, H. 登録日 2021-06-25 公開日 2023-03-29 最終更新日 2023-10-18 実験手法 ELECTRON MICROSCOPY (2.9 Å) 主引用文献 Structural insights into angiotensin receptor signaling modulation by balanced and biased agonists. Embo J., 42, 2023
5T6R	Nmd3 is a structural mimic of eIF5A, and activates the cpGTPase Lsg1 during 60S ribosome biogenesis: 60S-Nmd3 Complex 分子名称: 25S Ribosomal RNA, 5.8S Ribosomal RNA, 5S Ribosomal RNA, ... 著者 Malyutin, A.G, Musalgaonkar, S, Patchett, S, Frank, J, Johnson, A.W. 登録日 2016-09-01 公開日 2017-02-08 最終更新日 2024-03-13 実験手法 ELECTRON MICROSCOPY (4.2 Å) 主引用文献 Nmd3 is a structural mimic of eIF5A, and activates the cpGTPase Lsg1 during 60S ribosome biogenesis. EMBO J., 36, 2017
5TJ2	Gasdermin-B C-terminal domain containing the polymorphism residues Gly299:Ser306 fused to maltose binding protein 分子名称: Sugar ABC transporter substrate-binding protein,Gasdermin-B fusion protein, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose 著者 Chao, L.K, Herzberg, O. 登録日 2016-10-03 公開日 2017-02-01 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Human Gasdermin-B and disease: Sulfatide Binding, Caspase cleavage, and Structural impact of Asthma- and IBS-Associated Polymorphism Proc.Natl.Acad.Sci.Usa, 2017
5TTD	Minor pilin FctB from S. pyogenes with engineered intramolecular isopeptide bond 分子名称: FORMIC ACID, Maltose-binding periplasmic protein,Pilin isopeptide linkage domain protein, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose 著者 Young, P.G, Kwon, H, Squire, C.J, Baker, E.N. 登録日 2016-11-02 公開日 2017-03-01 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Engineering a Lys-Asn isopeptide bond into an immunoglobulin-like protein domain enhances its stability. Sci Rep, 7, 2017
5UB5	human POGLUT1 in complex with human Notch1 EGF12 S458T mutant and UDP 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Neurogenic locus notch homolog protein 1, ... 著者 Li, Z, Rini, J.M. 登録日 2016-12-20 公開日 2017-08-09 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.089 Å) 主引用文献 Structural basis of Notch O-glucosylation and O-xylosylation by mammalian protein-O-glucosyltransferase 1 (POGLUT1). Nat Commun, 8, 2017
5T0A	Crystal Structure of Heparan Sulfate 6-O-Sulfotransferase with bound PAP and heptasaccharide substrate 分子名称: 1,2-ETHANEDIOL, 2-deoxy-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-beta-D-glucopyranuronic acid-(1-4)-2-deoxy-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-beta-D-glucopyranuronic acid, ADENOSINE-3'-5'-DIPHOSPHATE, ... 著者 Pedersen, L.C, Moon, A.F, Krahn, J.M, Liu, J. 登録日 2016-08-15 公開日 2017-02-01 最終更新日 2020-07-29 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Structure Based Substrate Specificity Analysis of Heparan Sulfate 6-O-Sulfotransferases. ACS Chem. Biol., 12, 2017
5T05	Crystal structure of heparan sulfate 6-O-sulfotransferase with bound PAP and IdoA2S containing hexasaccharide substrate 分子名称: 1,2-ETHANEDIOL, 2-deoxy-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-beta-D-glucopyranuronic acid-(1-4)-2-deoxy-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-beta-D-glucopyranuronic acid, ADENOSINE-3'-5'-DIPHOSPHATE, ... 著者 Pedersen, L.C, Moon, A.F, krahn, J.M, Liu, J. 登録日 2016-08-15 公開日 2017-02-01 最終更新日 2020-07-29 実験手法 X-RAY DIFFRACTION (1.952 Å) 主引用文献 Structure Based Substrate Specificity Analysis of Heparan Sulfate 6-O-Sulfotransferases. ACS Chem. Biol., 12, 2017
5T03	Crystal structure of heparan sulfate 6-O-sulfotransferase with bound PAP and glucuronic acid containing hexasaccharide substrate 分子名称: 1,2-ETHANEDIOL, 2-deoxy-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-beta-D-glucopyranuronic acid-(1-4)-2-deoxy-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-beta-D-glucopyranuronic acid-(1-4)-2-deoxy-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-beta-D-glucopyranuronic acid, ADENOSINE-3'-5'-DIPHOSPHATE, ... 著者 Pedersen, L.C, Moon, A.F, Krahn, J.M, Liu, J. 登録日 2016-08-15 公開日 2017-02-01 最終更新日 2020-07-29 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Structure Based Substrate Specificity Analysis of Heparan Sulfate 6-O-Sulfotransferases. ACS Chem. Biol., 12, 2017
5VAW	Fusion of Maltose-binding Protein and PilA from Acinetobacter baumannii AB5075 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, GLUTAMIC ACID, LYSINE, ... 著者 Piepenbrink, K.H, Sundberg, E.J. 登録日 2017-03-28 公開日 2018-03-28 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (1.69 Å) 主引用文献 The structure of PilA fromAcinetobacter baumanniiAB5075 suggests a mechanism for functional specialization inAcinetobactertype IV pili. J. Biol. Chem., 294, 2019
5TJ4	Gasdermin-B C-terminal domain containing the polymorphism residues Gly299:Pro306 fused to maltose binding protein 分子名称: SODIUM ION, Sugar ABC transporter substrate-binding protein,Gasdermin-B fusion protein, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose 著者 Chao, L.K, Herzberg, O. 登録日 2016-10-03 公開日 2017-02-01 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (3.5 Å) 主引用文献 Gene polymorphism linked to increased asthma and IBD risk alters gasdermin-B structure, a sulfatide and phosphoinositide binding protein. Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5UVN	Structure of E. coli MCE protein PqiB, periplasmic domain 分子名称: Paraquat-inducible protein B 著者 Bhabha, G, Ekiert, D.C. 登録日 2017-02-20 公開日 2017-04-12 最終更新日 2024-03-13 実験手法 ELECTRON MICROSCOPY (3.96 Å) 主引用文献 Architectures of Lipid Transport Systems for the Bacterial Outer Membrane. Cell, 169, 2017
5UE8	The crystal structure of Munc13-1 C1C2BMUN domain 分子名称: CHLORIDE ION, Protein unc-13 homolog A, ZINC ION 著者 Tomchick, D.R, Rizo, J, Xu, J. 登録日 2016-12-29 公開日 2017-02-15 最終更新日 2018-03-28 実験手法 X-RAY DIFFRACTION (3.35 Å) 主引用文献 Mechanistic insights into neurotransmitter release and presynaptic plasticity from the crystal structure of Munc13-1 C1C2BMUN. Elife, 6, 2017
5TIB	Gasdermin-B C-terminal domain containing the polymorphism residues Arg299:Ser306 fused to maltose binding protein 分子名称: ACETATE ION, SODIUM ION, Sugar ABC transporter substrate-binding protein,Gasdermin-B, ... 著者 Chao, K, Herzberg, O. 登録日 2016-10-01 公開日 2017-02-01 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Human Gasdermin-B and disease: Sulfatide Binding, Caspase cleavage, and Structural impact of Asthma- and IBS-Associated Polymorphism Proc.Natl.Acad.Sci.Usa, 2017
5V6Y	Crystal structure of the human CLR:RAMP1 extracellular domain heterodimer with bound high-affinity and altered selectivity adrenomedullin variant 分子名称: ADM, Maltose-binding periplasmic protein,Receptor activity-modifying protein 1,Calcitonin gene-related peptide type 1 receptor, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose 著者 Pioszak, A, Booe, J. 登録日 2017-03-17 公開日 2018-01-31 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Probing the Mechanism of Receptor Activity-Modifying Protein Modulation of GPCR Ligand Selectivity through Rational Design of Potent Adrenomedullin and Calcitonin Gene-Related Peptide Antagonists. Mol. Pharmacol., 93, 2018

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