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2UWJ
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BU of 2uwj by Molmil
Structure of the heterotrimeric complex which regulates type III secretion needle formation
分子名称: NICKEL (II) ION, TYPE III EXPORT PROTEIN PSCE, TYPE III EXPORT PROTEIN PSCF, ...
著者Quinaud, M, Ple, S, Job, V, Contreras-Martel, C, Simorre, J.P, Attree, I, Dessen, A.
登録日2007-03-22
公開日2007-05-15
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure of the heterotrimeric complex that regulates type III secretion needle formation.
Proc. Natl. Acad. Sci. U.S.A., 104, 2007
8H4C
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Blasnase-T13A/M57P
分子名称: FORMIC ACID, L-asparaginase, MAGNESIUM ION
著者Lu, F, Wang, W, Chi, H, Ran, T.
登録日2022-10-10
公開日2023-10-18
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structure-based rational design of Bacillus licheniformis L-asparaginase with low/no D-asparaginase activity for a safer enzyme
To Be Published
4V7A
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BU of 4v7a by Molmil
E. coli 70S-fMetVal-tRNAVal post-translocation complex (post4)
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Blau, C, Bock, L.V, Schroder, G.F, Davydov, I, Fischer, N, Stark, H, Rodnina, M.V, Vaiana, A.C, Grubmuller, H.
登録日2013-10-14
公開日2014-07-09
最終更新日2024-10-16
実験手法ELECTRON MICROSCOPY (9 Å)
主引用文献Energy barriers and driving forces in tRNA translocation through the ribosome.
Nat.Struct.Mol.Biol., 20, 2013
8H4G
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BU of 8h4g by Molmil
Blasnase-T13A/M57N
分子名称: FORMIC ACID, L-asparaginase, MAGNESIUM ION
著者Lu, F, Wang, W, Chi, H, Ran, T.
登録日2022-10-10
公開日2023-10-18
実験手法X-RAY DIFFRACTION (1.81 Å)
主引用文献Structure-based rational design of Bacillus licheniformis L-asparaginase with low/no D-asparaginase activity for a safer enzyme
To Be Published
2UV6
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BU of 2uv6 by Molmil
Crystal Structure of a CBS domain pair from the regulatory gamma1 subunit of human AMPK in complex with AMP
分子名称: 5'-AMP-ACTIVATED PROTEIN KINASE SUBUNIT GAMMA-1, ADENOSINE MONOPHOSPHATE
著者Day, P, Sharff, A, Parra, L, Cleasby, A, Williams, M, Horer, S, Nar, H, Redemann, N, Tickle, I, Yon, J.
登録日2007-03-09
公開日2007-05-08
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure of a Cbs-Domain Pair from the Regulatory Gamma1 Subunit of Human Ampk in Complex with AMP and Zmp.
Acta Crystallogr.,Sect.D, 63, 2007
2UW2
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BU of 2uw2 by Molmil
Crystal structure of human ribonucleotide reductase subunit R2
分子名称: FE (III) ION, RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE M2 SUBUNIT
著者Welin, M, Ogg, D, Arrowsmith, C, Berglund, H, Busam, R, Collins, R, Edwards, A, Ehn, M, Flodin, S, Flores, A, Graslund, S, Hammarstrom, M, Hallberg, B.M, Holmberg Schiavone, L, Hogbom, M, Kotenyova, T, Magnusdottir, A, Moche, M, Nilsson-Ehle, P, Nyman, T, Persson, C, Sagemark, J, Sundstrom, M, Stenmark, P, Uppenberg, J, Thorsell, A.G, Van Den Berg, S, Wallden, K, Weigelt, J, Nordlund, P.
登録日2007-03-16
公開日2007-04-03
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal Structure of Human Ribonucleotide Reductase Subunit R2
To be Published
8H4H
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BU of 8h4h by Molmil
The apo structure of Aspergillomarasmine A synthetase
分子名称: PYRIDOXAL-5'-PHOSPHATE, Rhodanese domain-containing protein
著者Lu, M, Zhang, J, Wang, Z, Han, L.
登録日2022-10-10
公開日2023-10-18
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献The apo structure of Aspergillomarasmine A synthetase at 2.3 Angstroms resolution
To Be Published
8H4O
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BU of 8h4o by Molmil
Crystal Structure of nucleotide-free Irgb6_T95D mutant
分子名称: T-cell-specific guanine nucleotide triphosphate-binding protein 2
著者Saijo-Hamano, Y, Okuma, H, Sakai, N, Kato, T, Imasaki, T, Nitta, R.
登録日2022-10-11
公開日2023-10-18
最終更新日2024-07-03
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Structural basis of Irgb6 inactivation by Toxoplasma gondii through the phosphorylation of switch I.
Genes Cells, 29, 2024
2UUM
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BU of 2uum by Molmil
Crystal structure of C-phycocyanin from Phormidium, Lyngbya spp. (Marine) and Spirulina sp. (Fresh water) shows two different ways of energy transfer between two hexamers.
分子名称: BILIVERDINE IX ALPHA, C-PHYCOCYANIN ALPHA CHAIN, C-PHYCOCYANIN BETA CHAIN, ...
著者Satyanarayana, L, Patel, A, Mishra, S, K Ghosh, P, Suresh, C.G.
登録日2007-03-04
公開日2008-05-27
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Crystal Structure of C-Phycocyanin from Phormidium, Lyngbya Spp. (Marine) and Spirulina Sp. (Fresh Water) Shows Two Different Ways of Energy Transfer between Two Hexamers.
To be Published
8H7N
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BU of 8h7n by Molmil
Structure of nanobody 11A in complex with triazophos
分子名称: 1,2-ETHANEDIOL, Nanobody 11A, SODIUM ION, ...
著者Wang, H, Li, J.D, Shen, X, Xu, Z.L, Sun, Y.M.
登録日2022-10-20
公開日2023-10-25
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Structure of nanobody 11A in complex with triazophos
To Be Published
2UVX
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BU of 2uvx by Molmil
Structure of PKA-PKB chimera complexed with 7-azaindole
分子名称: 1H-PYRROLO[2,3-B]PYRIDINE, CAMP-DEPENDENT PROTEIN KINASE INHIBITOR ALPHA, CAMP-DEPENDENT PROTEIN KINASE, ...
著者Davies, T.G, Donald, A, McHardy, T, Rowlands, M.G, Hunter, L.J, Boyle, R.G, Aherne, G.W, Garrett, M.D, Collins, I.
登録日2007-03-15
公開日2007-05-08
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Rapid Evolution of 6-Phenylpurine Inhibitors of Protein Kinase B Through Structure-Based Design
J.Med.Chem., 50, 2007
8D9V
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BU of 8d9v by Molmil
gamma-Arf1 homodimeric interface within AP-1, Arf1, Nef lattice on narrow membrane tubes
分子名称: ADP ribosylation factor 1, AP-1 complex subunit beta-1, AP-1 complex subunit gamma-1, ...
著者Hooy, R.M, Hurley, J.H.
登録日2022-06-11
公開日2022-11-09
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (9.4 Å)
主引用文献Self-assembly and structure of a clathrin-independent AP-1:Arf1 tubular membrane coat.
Sci Adv, 8, 2022
8HGM
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BU of 8hgm by Molmil
Structure of SARS-CoV-2 spike RBD in complex with neutralizing antibody NIV-11
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, NIV-11 Fab heavy chain, NIV-11 Fab light chain, ...
著者Moriyama, S, Anraku, Y, Muranishi, S, Adachi, Y, Kuroda, D, Higuchi, Y, Kotaki, R, Tonouchi, K, Yumoto, K, Suzuki, T, Kita, S, Someya, T, Fukuhara, H, Kuroda, Y, Yamamoto, T, Onodera, T, Fukushi, S, Maeda, K, Nakamura-Uchiyama, F, Hashiguchi, T, Hoshino, A, Maenaka, K, Takahashi, Y.
登録日2022-11-15
公開日2023-10-25
最終更新日2024-09-25
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structural delineation and computational design of SARS-CoV-2-neutralizing antibodies against Omicron subvariants.
Nat Commun, 14, 2023
2UW7
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Structure of PKA-PKB chimera complexed with 4-(4-chloro-phenyl)-4-(4- (1H-pyrazol-4-yl)-phenyl)-piperidine
分子名称: 4-(4-CHLOROPHENYL)-4-[4-(1H-PYRAZOL-4-YL)PHENYL]PIPERIDINE, CAMP-DEPENDENT PROTEIN KINASE INHIBITOR ALPHA, CAMP-DEPENDENT PROTEIN KINASE, ...
著者Davies, T.G, Saxty, G, Woodhead, S.J, Berdini, V, Verdonk, M.L, Wyatt, P.G, Boyle, R.G, Barford, D, Downham, R, Garrett, M.D, Carr, R.A.
登録日2007-03-19
公開日2007-05-08
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Identification of Inhibitors of Protein Kinase B Using Fragment-Based Lead Discovery
J.Med.Chem., 50, 2007
4V8W
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BU of 4v8w by Molmil
Structure and conformational variability of the Mycobacterium tuberculosis fatty acid synthase multienzyme complex
分子名称: FLAVIN MONONUCLEOTIDE, TYPE-I FATTY ACID SYNTHASE
著者Ciccarelli, L, Connell, S.R, Enderle, M, Mills, D.J, Vonck, J, Grininger, M.
登録日2013-04-18
公開日2014-07-09
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (17.5 Å)
主引用文献Structure and Conformational Variability of the Mycobacterium Tuberculosis Fatty Acid Synthase Multienzyme Complex.
Structure, 21, 2013
2UXH
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TtgR in complex with Quercetin
分子名称: 3,5,7,3',4'-PENTAHYDROXYFLAVONE, HTH-TYPE TRANSCRIPTIONAL REGULATOR TTGR
著者Alguel, Y, Meng, C, Teran, W, Krell, T, Ramos, J.L, Gallegos, M.-T, Zhang, X.
登録日2007-03-28
公開日2007-05-08
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal Structures of Multidrug Binding Protein Ttgr in Complex with Antibiotics and Plant Antimicrobials.
J.Mol.Biol., 369, 2007
8HI9
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BU of 8hi9 by Molmil
SARS-CoV-2 3CL protease (3CLpro) in complex with Robinetin
分子名称: 3,7-bis(oxidanyl)-2-[3,4,5-tris(oxidanyl)phenyl]chromen-4-one, 3C-like proteinase nsp5
著者Su, H.X, Xie, H, Li, M.J, Xu, Y.C.
登録日2022-11-19
公開日2023-10-25
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.28 Å)
主引用文献Discovery of Polyphenolic Natural Products as SARS-CoV-2 M pro Inhibitors for COVID-19.
Pharmaceuticals, 16, 2023
4V97
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BU of 4v97 by Molmil
Crystal structure of the bacterial ribosome ram mutation G299A.
分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
著者Fagan, C.E, Dunkle, J.A, Maehigashi, T, Dunham, C.M.
登録日2012-04-06
公開日2014-07-09
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (3.516 Å)
主引用文献Reorganization of an intersubunit bridge induced by disparate 16S ribosomal ambiguity mutations mimics an EF-Tu-bound state.
Proc.Natl.Acad.Sci.USA, 110, 2013
8HQ6
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KL2 in complex with CRM1-Ran-RanBP1
分子名称: CHLORIDE ION, CRM1 isoform 1, DIMETHYL SULFOXIDE, ...
著者Sun, Q, Jian, L.
登録日2022-12-13
公開日2023-10-25
実験手法X-RAY DIFFRACTION (2.03 Å)
主引用文献Discovery of Aminoratjadone Derivatives as Potent Noncovalent CRM1 Inhibitors.
J.Med.Chem., 66, 2023
2UVL
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Human BIR3 domain of Baculoviral Inhibitor of Apoptosis Repeat- Containing 3 (BIRC3)
分子名称: BACULOVIRAL IAP REPEAT-CONTAINING PROTEIN 3, GLYCEROL, ZINC ION
著者Moche, M, Lehtio, L, Arrowsmith, C, Berglund, H, Busam, R, Collins, R, Dahlgren, L.G, Edwards, A, Flodin, S, Flores, A, Graslund, S, Hammarstrom, M, Hallberg, B.M, Holmberg-Schiavone, L, Johansson, I, Karlberg, T, Kotenyova, T, Nyman, T, Ogg, D, Persson, C, Sagemark, J, Stenmark, P, Sundstrom, M, Thorsell, A.G, Upsten, M, Van Den Berg, S, Weigelt, J, Nordlund, P.
登録日2007-03-12
公開日2007-03-27
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.91 Å)
主引用文献Structures of Bir Domains from Human Naip and Ciap2.
Acta Crystallogr.,Sect.F, 65, 2009
4V9L
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70S Ribosome translocation intermediate FA-3.6A containing elongation factor EFG/FUSIDIC ACID/GDP, mRNA, and tRNA bound in the pe*/E state.
分子名称: 23S ribosomal RNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
著者Zhou, J, Lancaster, L, Donohue, J.P, Noller, H.F.
登録日2013-04-24
公開日2014-07-09
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Crystal structures of EF-G-ribosome complexes trapped in intermediate states of translocation.
Science, 340, 2013
8H5T
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Crystal structure of SARS-CoV-2 spike receptor-binding domain in complex with neutralizing nanobody Nb-015
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Nanobody Nb-015, Spike protein S1
著者Yang, J, Lin, S, Lu, G.W.
登録日2022-10-13
公開日2023-10-18
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Development of a bispecific nanobody conjugate broadly neutralizes diverse SARS-CoV-2 variants and structural basis for its broad neutralization.
Plos Pathog., 19, 2023
2UW0
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Structure of PKA-PKB chimera complexed with 6-(4-(4-(4-Chloro-phenyl) -piperidin-4-yl)-phenyl)-9H-purine
分子名称: 6-{4-[4-(4-CHLOROPHENYL)PIPERIDIN-4-YL]PHENYL}-9H-PURINE, CAMP-DEPENDENT PROTEIN KINASE INHIBITOR ALPHA, CAMP-DEPENDENT PROTEIN KINASE, ...
著者Davies, T.G, Donald, A, McHardy, T, Rowlands, M.G, Hunter, L.J, Boyle, R.G, Aherne, G.W, Garrett, M.D, Collins, I.
登録日2007-03-15
公開日2007-05-08
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Rapid Evolution of 6-Phenylpurine Inhibitors of Protein Kinase B Through Structure-Based Design
J.Med.Chem., 50, 2007
8H61
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Ketoreductase CpKR mutant - M2
分子名称: Mutant M2 of ketoreductase CpKR, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Chen, C, Pan, J, Xu, J.H.
登録日2022-10-14
公開日2023-10-18
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Computational redesign of a robust ketoreductase for asymmetric synthesis of enantiopure diltiazem precursor.
To Be Published
2UX6
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Pseudoazurin with engineered amicyanin ligand loop, oxidized form, pH 7.5
分子名称: CHLORIDE ION, COPPER (II) ION, GLYCEROL, ...
著者Velarde, M, Huber, R, Yanagisawa, S, Dennison, C, Messerschmidt, A.
登録日2007-03-27
公開日2007-08-21
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Influence of Loop Shortening on the Metal Binding Site of Cupredoxin Pseudoazurin.
Biochemistry, 46, 2007

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