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8HNW
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BU of 8hnw by Molmil
Crystal structure of HpaCas9-sgRNA surveillance complex bound to double-stranded DNA
分子名称: CRISPR-associated endonuclease Cas9, Non-target strand, Target strand, ...
著者Sun, W, Cheng, Z, Wang, Y.
登録日2022-12-08
公開日2023-07-19
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (3.41 Å)
主引用文献AcrIIC4 inhibits type II-C Cas9 by preventing R-loop formation.
Proc.Natl.Acad.Sci.USA, 120, 2023
8HNS
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BU of 8hns by Molmil
Crystal structure of an anti-CRISPR protein AcrIIC4 in apo form
分子名称: GLYCEROL, anti-CRISPR protein AcrIIC4
著者Sun, W, Cheng, Z, Yang, J, Wang, Y.
登録日2022-12-08
公開日2023-07-19
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.54 Å)
主引用文献AcrIIC4 inhibits type II-C Cas9 by preventing R-loop formation.
Proc.Natl.Acad.Sci.USA, 120, 2023
8HNT
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BU of 8hnt by Molmil
Crystal structure of anti-CRISPR protein AcrIIC4 bound to HpaCas9-sgRNA surveillance complex
分子名称: CRISPR-associated endonuclease Cas9, anti-CRISPR protein AcrIIC4, sgRNA
著者Sun, W, Cheng, Z, Wang, Y.
登録日2022-12-08
公開日2023-07-19
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (3.06 Å)
主引用文献AcrIIC4 inhibits type II-C Cas9 by preventing R-loop formation.
Proc.Natl.Acad.Sci.USA, 120, 2023
8HNV
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BU of 8hnv by Molmil
CryoEM structure of HpaCas9-sgRNA-dsDNA in the presence of AcrIIC4
分子名称: CRISPR-associated endonuclease Cas9, anti-CRISPR protein AcrIIC4, non-target strand, ...
著者Sun, W, Cheng, Z, Wang, J, Yang, X, Wang, Y.
登録日2022-12-08
公開日2023-07-19
最終更新日2025-07-02
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献AcrIIC4 inhibits type II-C Cas9 by preventing R-loop formation.
Proc.Natl.Acad.Sci.USA, 120, 2023
6B7K
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BU of 6b7k by Molmil
GH43 Endo-Arabinanase from Bacillus licheniformis
分子名称: CALCIUM ION, Endo-alpha-(1->5)-L-arabinanase
著者Farro, E.G.S, Nascimento, A.S.
登録日2017-10-04
公開日2018-06-13
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献GH43 endo-arabinanase from Bacillus licheniformis: Structure, activity and unexpected synergistic effect on cellulose enzymatic hydrolysis.
Int. J. Biol. Macromol., 117, 2018
4GGF
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BU of 4ggf by Molmil
Crystal structure of Mn2+ bound calprotectin
分子名称: CALCIUM ION, GLYCEROL, MANGANESE (II) ION, ...
著者Damo, S.M, Fritz, G.
登録日2012-08-06
公開日2013-02-20
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Molecular basis for manganese sequestration by calprotectin and roles in the innate immune response to invading bacterial pathogens.
Proc.Natl.Acad.Sci.USA, 110, 2013
4KS0
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BU of 4ks0 by Molmil
Pyruvate kinase (PYK) from Trypanosoma cruzi in the presence of Magnesium, oxalate and F26BP
分子名称: 2,6-di-O-phosphono-beta-D-fructofuranose, MAGNESIUM ION, OXALATE ION, ...
著者Morgan, H.P, Zhong, W, McNae, I.W, Michels, P.A.M, Fothergill-Gilmore, L.A, Walkinshaw, M.D.
登録日2013-05-17
公開日2014-11-19
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structures of pyruvate kinases display evolutionarily divergent allosteric strategies.
R Soc Open Sci, 1, 2014
3GEI
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BU of 3gei by Molmil
Crystal structure of MnmE from Chlorobium tepidum in complex with GCP
分子名称: MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER, tRNA modification GTPase mnmE
著者Meyer, S, Wittinghofer, A.
登録日2009-02-25
公開日2009-10-27
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献Kissing G domains of MnmE monitored by X-ray crystallography and pulse electron paramagnetic resonance spectroscopy
Plos Biol., 7, 2009
4JB0
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BU of 4jb0 by Molmil
Rhodopseudomonas palustris (strain CGA009) Rp1789 transport protein
分子名称: 3-(4-HYDROXY-3-METHOXYPHENYL)-2-PROPENOIC ACID, 3-(4-HYDROXY-PHENYL)PYRUVIC ACID, GLYCEROL, ...
著者Salmon, R.
登録日2013-02-19
公開日2013-04-17
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.91 Å)
主引用文献The CouPSTU and TarPQM Transporters in Rhodopseudomonas palustris: Redundant, Promiscuous Uptake Systems for Lignin-Derived Aromatic Substrates.
Plos One, 8, 2013
4DXN
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BU of 4dxn by Molmil
Crystal Structure of a reconstructed Kaede-type Red Fluorescent Protein, Least Evolved Ancestor (LEA)
分子名称: LEAST EVOLVED ANCESTOR (LEA) GFP-LIKE PROTEINS, SULFATE ION
著者Kim, H, Fromme, R, Wachter, R.M.
登録日2012-02-27
公開日2013-02-27
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Acid-Base Catalysis and Crystal Structures of a Least Evolved Ancestral GFP-like Protein Undergoing Green-to-Red Photoconversion.
Biochemistry, 52, 2013
4EES
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BU of 4ees by Molmil
Crystal structure of iLOV
分子名称: FLAVIN MONONUCLEOTIDE, Phototropin-2
著者Hitomi, K, Christie, J.M, Arvai, A.S, Hartfield, K.A, Pratt, A.J, Tainer, J.A, Getzoff, E.D.
登録日2012-03-28
公開日2012-05-16
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.805 Å)
主引用文献Structural Tuning of the Fluorescent Protein iLOV for Improved Photostability.
J.Biol.Chem., 287, 2012
2E9Q
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BU of 2e9q by Molmil
Recombinant pro-11S globulin of pumpkin
分子名称: 11S globulin subunit beta, CHLORIDE ION, PHOSPHATE ION
著者Fukuda, T, Prak, K, Itoh, T, Masuda, T, Maruyama, N, Mikami, B, Utsumi, S.
登録日2007-01-26
公開日2008-02-26
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Conservation and divergence on plant seed 11S globulins based on crystal structures.
Biochim.Biophys.Acta, 2010
4HUC
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BU of 4huc by Molmil
Crystal structure of LdtMt2, a L,D-transpeptidase from Mycobacterium tuberculosis: domain B and C
分子名称: ACETATE ION, PROBABLE CONSERVED LIPOPROTEIN LPPS, SODIUM ION
著者Both, D, Steiner, E, Lindqvist, Y, Schnell, R, Schneider, G.
登録日2012-11-02
公開日2012-12-12
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献Structure of LdtMt2, an L,D-transpeptidase from Mycobacterium tuberculosis.
Acta Crystallogr.,Sect.D, 69, 2013
4IAE
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BU of 4iae by Molmil
Crystal structure of BAY 60-2770 bound to nostoc H-NOX domain
分子名称: 4-({(4-carboxybutyl)[2-(5-fluoro-2-{[4'-(trifluoromethyl)biphenyl-4-yl]methoxy}phenyl)ethyl]amino}methyl)benzoic acid, Alr2278 protein, MALONATE ION
著者Kumar, V, van den Akker, F, Martin, F.
登録日2012-12-06
公開日2013-11-20
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Insights into BAY 60-2770 Activation and S-Nitrosylation-Dependent Desensitization of Soluble Guanylyl Cyclase via Crystal Structures of Homologous Nostoc H-NOX Domain Complexes.
Biochemistry, 52, 2013
4GOB
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BU of 4gob by Molmil
Low pH Crystal Structure of a reconstructed Kaede-type Red Fluorescent Protein, Least Evolved Ancestor (LEA)
分子名称: Kaede-type Fluorescent Protein
著者Kim, H, Grunkemeyer, T.J, Chen, L, Fromme, R, Wachter, R.M.
登録日2012-08-19
公開日2013-07-31
最終更新日2024-11-27
実験手法X-RAY DIFFRACTION (1.53 Å)
主引用文献Acid-base catalysis and crystal structures of a least evolved ancestral GFP-like protein undergoing green-to-red photoconversion.
Biochemistry, 52, 2013
4L7T
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BU of 4l7t by Molmil
B. fragilis NanU
分子名称: 1,2-ETHANEDIOL, ACETATE ION, NanU sialic acid binding protein, ...
著者Rafferty, J.B, Phansopa, C, Stafford, G.P.
登録日2013-06-14
公開日2014-01-01
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.61 Å)
主引用文献Structural and functional characterization of NanU, a novel high-affinity sialic acid-inducible binding protein of oral and gut-dwelling Bacteroidetes species.
Biochem.J., 458, 2014
2QCG
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BU of 2qcg by Molmil
Crystal structure of the orotidine-5'-monophosphate decarboxylase domain of human UMP synthase bound to 5-bromo-UMP
分子名称: 5-BROMO-URIDINE-5'-MONOPHOSPHATE, Uridine 5'-monophosphate synthase (UMP synthase)
著者Wittmann, J, Rudolph, M.
登録日2007-06-19
公開日2007-11-06
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Structures of the human orotidine-5'-monophosphate decarboxylase support a covalent mechanism and provide a framework for drug design.
Structure, 16, 2008
4CL2
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BU of 4cl2 by Molmil
structure of periplasmic metal binding protein from candidatus liberibacter asiaticus
分子名称: ACETATE ION, GLYCEROL, MANGANESE (II) ION, ...
著者Sharma, N, Selvakumar, P, Bhose, S, Ghosh, D.K, Kumar, P, Sharma, A.K.
登録日2014-01-11
公開日2015-01-28
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.63 Å)
主引用文献Crystal Structure of a Periplasmic Solute Binding Protein in Metal-Free, Intermediate and Metal-Bound States from Candidatus Liberibacter Asiaticus.
J.Struct.Biol., 189, 2015
5OO0
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BU of 5oo0 by Molmil
Cdk2(WT) covalent adduct with D28 at C177
分子名称: Cyclin-dependent kinase 2, methyl 4-propanoyl-2,3-dihydroquinoxaline-1-carboxylate
著者Craven, G, Morgan, R.M.L, Mann, D.J.
登録日2017-08-04
公開日2018-03-14
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献High-Throughput Kinetic Analysis for Target-Directed Covalent Ligand Discovery.
Angew. Chem. Int. Ed. Engl., 57, 2018
5ONC
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BU of 5onc by Molmil
Catabolism of the Cholesterol Side Chain in Mycobacterium tuberculosis is Controlled by a Redox-Sensitive Thiol Switch
分子名称: CHLORIDE ION, Steroid 3-ketoacyl-CoA thiolase
著者Schaefer, C, Kuper, J, Sampson, N.S, Kisker, C.
登録日2017-08-03
公開日2017-08-23
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (2.19 Å)
主引用文献Catabolism of the Cholesterol Side Chain in Mycobacterium tuberculosis Is Controlled by a Redox-Sensitive Thiol Switch.
ACS Infect Dis, 3, 2017
5OSJ
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BU of 5osj by Molmil
Cdk2(WT) with covalent adduct at C177
分子名称: Cyclin-dependent kinase 2, ~{tert}-butyl 4-propanoyl-2,3-dihydroquinoxaline-1-carboxylate
著者Craven, G, Morgan, R.M.L, Mann, D.J.
登録日2017-08-17
公開日2018-03-14
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (1.83 Å)
主引用文献High-Throughput Kinetic Analysis for Target-Directed Covalent Ligand Discovery.
Angew. Chem. Int. Ed. Engl., 57, 2018
2XTT
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BU of 2xtt by Molmil
Bovine trypsin in complex with evolutionary enhanced Schistocerca gregaria protease inhibitor 1 (SGPI-1-P02)
分子名称: ACETATE ION, CALCIUM ION, CATIONIC TRYPSIN, ...
著者Wahlgren, W.Y, Pal, G, Kardos, J, Porrogi, P, Szenthe, B, Patthy, A, Graf, L, Katona, G.
登録日2010-10-12
公開日2010-11-10
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (0.93 Å)
主引用文献The catalytic aspartate is protonated in the Michaelis complex formed between trypsin and an in vitro evolved substrate-like inhibitor: a refined mechanism of serine protease action.
J.Biol.Chem., 286, 2011
1HJ9
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BU of 1hj9 by Molmil
Atomic resolution structures of trypsin provide insight into structural radiation damage
分子名称: ANILINE, BETA-TRYPSIN, CALCIUM ION, ...
著者Leiros, H.-K.S, McSweeney, S.M, Smalas, A.O.
登録日2001-01-10
公開日2002-01-04
最終更新日2025-04-09
実験手法X-RAY DIFFRACTION (0.95 Å)
主引用文献Atomic Resolution Structure of Trypsin Provide Insight Into Structural Radiation Damage
Acta Crystallogr.,Sect.D, 57, 2001
5PFY
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BU of 5pfy by Molmil
PanDDA analysis group deposition -- Crystal Structure of BAZ2B after initial refinement with no ligand modelled (structure 162)
分子名称: 1,2-ETHANEDIOL, Bromodomain adjacent to zinc finger domain protein 2B
著者Pearce, N.M, Krojer, T, Talon, R, Bradley, A.R, Fairhead, M, Sethi, R, Wright, N, MacLean, E, Collins, P, Brandao-Neto, J, Douangamath, A, Renjie, Z, Dias, A, Vollmar, M, Ng, J, Brennan, P.E, Cox, O, Bountra, C, Arrowsmith, C.H, Edwards, A, von Delft, F.
登録日2017-02-03
公開日2017-03-22
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献A multi-crystal method for extracting obscured crystallographic states from conventionally uninterpretable electron density.
Nat Commun, 8, 2017
5PGD
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BU of 5pgd by Molmil
PanDDA analysis group deposition -- Crystal Structure of BAZ2B after initial refinement with no ligand modelled (structure 177)
分子名称: 1,2-ETHANEDIOL, Bromodomain adjacent to zinc finger domain protein 2B
著者Pearce, N.M, Krojer, T, Talon, R, Bradley, A.R, Fairhead, M, Sethi, R, Wright, N, MacLean, E, Collins, P, Brandao-Neto, J, Douangamath, A, Renjie, Z, Dias, A, Vollmar, M, Ng, J, Brennan, P.E, Cox, O, Bountra, C, Arrowsmith, C.H, Edwards, A, von Delft, F.
登録日2017-02-03
公開日2017-03-22
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献A multi-crystal method for extracting obscured crystallographic states from conventionally uninterpretable electron density.
Nat Commun, 8, 2017

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