Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5MBT
DownloadVisualize
BU of 5mbt by Molmil
CeuE (H227L, Y288F variant) a periplasmic protein from Campylobacter jejuni
分子名称: Enterochelin uptake periplasmic binding protein
著者Wilde, E.J, Blagova, E.V, Hughes, A, Raines, D.J, Moroz, O.V, Turkenburg, J.P, Duhme-Klair, A.-K, Wilson, K.S.
登録日2016-11-08
公開日2017-04-12
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Interactions of the periplasmic binding protein CeuE with Fe(III) n-LICAM(4-) siderophore analogues of varied linker length.
Sci Rep, 7, 2017
8FAO
DownloadVisualize
BU of 8fao by Molmil
Bile Salt Hydrolase B from Lactobacillus gasseri with covalent inhibitor bound
分子名称: (5R)-5-[(1R,3aS,3bR,5aR,7R,9aS,9bS,11S,11aR)-7,11-dihydroxy-9a,11a-dimethylhexadecahydro-1H-cyclopenta[a]phenanthren-1-yl]-1-fluorohexan-2-one (non-preferred name), Choloylglycine hydrolase, NICKEL (II) ION
著者Grundy, M.K, Walker, M.E, Redinbo, M.R.
登録日2022-11-28
公開日2023-12-13
実験手法X-RAY DIFFRACTION (2.14 Å)
主引用文献Structural diversity of bile salt hydrolases reveals rationale for substrate selectivity
To Be Published
6GUA
DownloadVisualize
BU of 6gua by Molmil
Xylulose 5-phosphate phosphoketolase from Lactococcus lactis
分子名称: MAGNESIUM ION, PHOSPHATE ION, Probable phosphoketolase, ...
著者Scheidig, A.J, Szedlacsek, S.E.
登録日2018-06-19
公開日2019-05-22
最終更新日2024-01-17
実験手法SOLUTION SCATTERING (1.95 Å), X-RAY DIFFRACTION
主引用文献Crystal structure of a xylulose 5-phosphate phosphoketolase. Insights into the substrate specificity for xylulose 5-phosphate.
J.Struct.Biol., 207, 2019
6X3X
DownloadVisualize
BU of 6x3x by Molmil
Human GABAA receptor alpha1-beta2-gamma2 subtype in complex with GABA plus diazepam
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 7-CHLORO-1-METHYL-5-PHENYL-1,3-DIHYDRO-2H-1,4-BENZODIAZEPIN-2-ONE, ...
著者Kim, J.J, Gharpure, A, Teng, J, Zhuang, Y, Howard, R.J, Zhu, S, Noviello, C.M, Walsh, R.M, Lindahl, E, Hibbs, R.E.
登録日2020-05-21
公開日2020-09-09
最終更新日2023-11-15
実験手法ELECTRON MICROSCOPY (2.92 Å)
主引用文献Shared structural mechanisms of general anaesthetics and benzodiazepines.
Nature, 585, 2020
7UB2
DownloadVisualize
BU of 7ub2 by Molmil
Structure of RecT protein from Listeria innoccua phage A118 in complex with 83-mer annealed duplex
分子名称: DNA (49-mer), RecT
著者Bell, C.E, Caldwell, B.J.
登録日2022-03-14
公開日2022-12-07
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structure of a RecT/Red beta family recombinase in complex with a duplex intermediate of DNA annealing.
Nat Commun, 13, 2022
7P4A
DownloadVisualize
BU of 7p4a by Molmil
Non-canonical Staphylococcus aureus pathogenicity island repression.
分子名称: Sri, Stl
著者Miguel-Romero, L, Alqasmi, M, Bacarizo, J, Tan, J.A, Cogdell, R.J, Chen, J, Byron, O, Christie, G.E, Marina, A, Penades, J.R.
登録日2021-07-10
公開日2022-07-27
最終更新日2022-11-16
実験手法X-RAY DIFFRACTION (2.901 Å)
主引用文献Non-canonical Staphylococcus aureus pathogenicity island repression.
Nucleic Acids Res., 50, 2022
2HLD
DownloadVisualize
BU of 2hld by Molmil
Crystal structure of yeast mitochondrial F1-ATPase
分子名称: ATP synthase alpha chain, mitochondrial, ATP synthase beta chain, ...
著者Kabaleeswaran, V, Puri, N, Walker, J.E, Leslie, A.G, Mueller, D.M.
登録日2006-07-06
公開日2006-11-28
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Novel features of the rotary catalytic mechanism revealed in the structure of yeast F(1) ATPase.
Embo J., 25, 2006
2HIO
DownloadVisualize
BU of 2hio by Molmil
HISTONE OCTAMER (CHICKEN), CHROMOSOMAL PROTEIN
分子名称: PROTEIN (HISTONE H2A), PROTEIN (HISTONE H2B), PROTEIN (HISTONE H3), ...
著者Arents, G, Moudrianakis, E.N.
登録日1999-06-15
公開日2000-01-12
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献The nucleosomal core histone octamer at 3.1 A resolution: a tripartite protein assembly and a left-handed superhelix.
Proc.Natl.Acad.Sci.USA, 88, 1991
6ZLO
DownloadVisualize
BU of 6zlo by Molmil
E2 core of the fungal Pyruvate dehydrogenase complex with asymmetric interior PX30 component
分子名称: Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial
著者Forsberg, B.O, Howard, R.J, Aibara, S, Mortesaei, N, Lindahl, E.
登録日2020-06-30
公開日2020-09-23
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Arrangement and symmetry of the fungal E3BP-containing core of the pyruvate dehydrogenase complex.
Nat Commun, 11, 2020
7PBC
DownloadVisualize
BU of 7pbc by Molmil
Crystal structure of engineered TCR (796) complexed to HLA-A*02:01 presenting MAGE-A10 9-mer peptide
分子名称: Beta-2-microglobulin, CHLORIDE ION, GLYCEROL, ...
著者Simister, P.C, Border, E.C, Vieira, J.F, Pumphrey, N.J.
登録日2021-08-02
公開日2022-08-03
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.04 Å)
主引用文献Structural insights into engineering a T-cell receptor targeting MAGE-A10 with higher affinity and specificity for cancer immunotherapy.
J Immunother Cancer, 10, 2022
6GXH
DownloadVisualize
BU of 6gxh by Molmil
The hit-and-return system enables efficient time-resolved serial synchrotron crystallography: FAcD 0MS after reaction initiation
分子名称: Fluoroacetate dehalogenase
著者Schulz, E.C, Mehrabi, P, Mueller-Werkmeister, H, Tellkamp, F, Stuart, W, Persch, E, De Gasparo, R, Diederich, F, Pai, E.F, Miller, R.J.D.
登録日2018-06-27
公開日2018-10-17
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.802 Å)
主引用文献The hit-and-return system enables efficient time-resolved serial synchrotron crystallography.
Nat. Methods, 15, 2018
6RSY
DownloadVisualize
BU of 6rsy by Molmil
The complex between TCR a7b2 and human Class I MHC HLA-A0201-WT1 with the bound RMFPNAPYL peptide.
分子名称: 1,2-ETHANEDIOL, ARG-MET-PHE-PRO-ASN-ALA-PRO-TYR-LEU, Beta-2-microglobulin, ...
著者Srikannathasan, V, Robinson, R.A.
登録日2019-05-22
公開日2020-04-15
最終更新日2020-05-13
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献Specificity of bispecific T cell receptors and antibodies targeting peptide-HLA.
J.Clin.Invest., 130, 2020
6ZSO
DownloadVisualize
BU of 6zso by Molmil
Solution structure of the water-soluble LU-domain of human Lypd6b protein
分子名称: Ly6/PLAUR domain-containing protein 6B
著者Tsarev, A.V, Kulbatskii, D.S, Paramonov, A.S, Lyukmanova, E.N, Shenkarev, Z.O.
登録日2020-07-16
公開日2021-01-13
実験手法SOLUTION NMR
主引用文献Structural Diversity and Dynamics of Human Three-Finger Proteins Acting on Nicotinic Acetylcholine Receptors.
Int J Mol Sci, 21, 2020
7UY3
DownloadVisualize
BU of 7uy3 by Molmil
Crystal structure of human Fgr tyrosine kinase in complex with TL02-59
分子名称: 1,2-ETHANEDIOL, 3-[(6,7-dimethoxyquinazolin-4-yl)oxy]-N-{4-[(4-ethylpiperazin-1-yl)methyl]-3-(trifluoromethyl)phenyl}-4-methylbenzamide, GLYCEROL, ...
著者Du, S, Alvarado, J.J, Smithgall, T.E.
登録日2022-05-06
公開日2022-12-28
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.99 Å)
主引用文献ATP-site inhibitors induce unique conformations of the acute myeloid leukemia-associated Src-family kinase, Fgr.
Structure, 30, 2022
7UY0
DownloadVisualize
BU of 7uy0 by Molmil
Crystal structure of human Fgr tyrosine kinase in complex with A-419259
分子名称: 7-[trans-4-(4-methylpiperazin-1-yl)cyclohexyl]-5-(4-phenoxyphenyl)-7H-pyrrolo[2,3-d]pyrimidin-4-amine, CHLORIDE ION, GLYCEROL, ...
著者Du, S, Alvarado, J.J, Smithgall, T.E.
登録日2022-05-06
公開日2022-12-28
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献ATP-site inhibitors induce unique conformations of the acute myeloid leukemia-associated Src-family kinase, Fgr.
Structure, 30, 2022
6NXA
DownloadVisualize
BU of 6nxa by Molmil
ECAII(D90T,K162T) MUTANT AT PH 7
分子名称: ACETIC ACID, GLYCEROL, L-asparaginase 2
著者Lubkowski, J, Wlodawer, A.
登録日2019-02-08
公開日2019-08-07
最終更新日2020-08-19
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献Opportunistic complexes of E. coli L-asparaginases with citrate anions.
Sci Rep, 9, 2019
7UJD
DownloadVisualize
BU of 7ujd by Molmil
PSMD2 Structure bound to MC1 and Fab8/14
分子名称: 26S proteasome non-ATPase regulatory subunit 2, ACY-PHE-PRO-ASP-VAL-SAR-LEU-HIS-ARG-TYR-TRP-GLY-TRP-ASP-CYS-GLY-NH2, Fab 14 HC CDRs, ...
著者Johnson, M.C, Bashore, C, Ciferri, C, Dueber, E.C.
登録日2022-03-30
公開日2023-01-11
実験手法ELECTRON MICROSCOPY (2.5 Å)
主引用文献Targeted degradation via direct 26S proteasome recruitment.
Nat.Chem.Biol., 19, 2023
8GDR
DownloadVisualize
BU of 8gdr by Molmil
SARS-Cov2 S protein structure in complex with neutralizing monoclonal antibody 002-S21B10
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Monoclonal antibody 002-S21B10 heavy chain variable domain, ...
著者Patel, A, Ortlund, E.A.
登録日2023-03-06
公開日2024-03-13
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Elucidating the mechanism of SARS-CoV-2 Omicron variant escape from a RBD class-3 human antibody
To Be Published
8GCK
DownloadVisualize
BU of 8gck by Molmil
Crystal structure of the human CHIP-TPR domain in complex with a 6mer acetylated tau peptide
分子名称: ACE-SER-ILE-ASP-MET-VAL-ASP, E3 ubiquitin-protein ligase CHIP
著者Wucherer, K, Bohn, M.F, Basu, K, Nadel, C.M, Gestwicki, J.E, Craik, C.S.
登録日2023-03-02
公開日2024-03-06
実験手法X-RAY DIFFRACTION (1.36823535 Å)
主引用文献Intersecting PTMs regulate clearance of pathogenic tau by the ubiquitin ligase CHIP.
To Be Published
7UIH
DownloadVisualize
BU of 7uih by Molmil
PSMD2 Structure
分子名称: 26S proteasome non-ATPase regulatory subunit 2, Fab 14 HC CDRs, Fab 14 LC CDRs, ...
著者Johnson, M.C, Bashore, C, Ciferri, C, Dueber, E.C.
登録日2022-03-29
公開日2023-01-11
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Targeted degradation via direct 26S proteasome recruitment.
Nat.Chem.Biol., 19, 2023
1H1B
DownloadVisualize
BU of 1h1b by Molmil
Crystal structure of human neutrophil elastase complexed with an inhibitor (GW475151)
分子名称: (2S)-3-METHYL-2-((2R,3S)-3-[(METHYLSULFONYL)AMINO]-1-{[2-(PYRROLIDIN-1-YLMETHYL)-1,3-OXAZOL-4-YL]CARBONYL}PYRROLIDIN-2-YL)BUTANOIC ACID, LEUKOCYTE ELASTASE, alpha-L-fucopyranose-(1-6)-2-acetamido-2-deoxy-beta-D-glucopyranose
著者Macdonald, S.J.F, Dowle, M.D, Harrison, L.A, Clarke, G.D.E, Inglis, G.G.A, Johnson, M.R, Smith, R.A, Amour, A, Fleetwood, G, Humphreys, D.C, Molloy, C.R, Dixon, M, Godward, R.E, Wonacott, A.J, Singh, O.M.P, Hodgson, S.T, Hardy, G.W.
登録日2002-07-05
公開日2002-08-29
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Discovery of Further Pyrrolidine Trans-Lactams as Inhibitors of Human Neutrophil Elastase (Hne) with Potential as Development Candidates and the Crystal Structure of Hne Complexed with an Inhibitor (Gw475151)
J.Med.Chem., 45, 2002
5NCD
DownloadVisualize
BU of 5ncd by Molmil
Crystal structure of the polysaccharide deacetylase Bc1974 from Bacillus cereus in complex with (2S)-2-amino-5-(diaminomethylideneamino)-N-hydroxypentanamide
分子名称: ACETATE ION, CITRIC ACID, N-HYDROXY-L-ARGININAMIDE, ...
著者Giastas, P, Andreou, A, Eliopoulos, E.E.
登録日2017-03-03
公開日2018-02-21
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.447 Å)
主引用文献Structures of the Peptidoglycan N-Acetylglucosamine Deacetylase Bc1974 and Its Complexes with Zinc Metalloenzyme Inhibitors.
Biochemistry, 57, 2018
6Y6L
DownloadVisualize
BU of 6y6l by Molmil
Structure the ananain protease from Ananas comosus with a thiomethylated catalytic cysteine
分子名称: Ananain, GLYCEROL, SULFATE ION
著者Azarkan, M, Charlier, P, Herman, R, Delbrassine, F, Sauvage, E, M Rabet, N, Calvo Esposito, R, Kerff, F.
登録日2020-02-26
公開日2020-11-25
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Structures of the free and inhibitors-bound forms of bromelain and ananain from Ananas comosus stem and in vitro study of their cytotoxicity.
Sci Rep, 10, 2020
6NXC
DownloadVisualize
BU of 6nxc by Molmil
ECAI(T162A) MUTANT IN COMPLEX WITH CITRATE AT PH 4
分子名称: 1,2-ETHANEDIOL, ASPARAGINE, CHLORIDE ION, ...
著者Lubkowski, J, Wlodawer, A.
登録日2019-02-08
公開日2019-08-07
最終更新日2019-11-20
実験手法X-RAY DIFFRACTION (1.74 Å)
主引用文献Opportunistic complexes of E. coli L-asparaginases with citrate anions.
Sci Rep, 9, 2019
6Y1Z
DownloadVisualize
BU of 6y1z by Molmil
Mouse serotonin 5HT3 receptor in complex with palonosetron
分子名称: (3~{a}~{S})-2-[(3~{S})-1-azabicyclo[2.2.2]octan-3-yl]-3~{a},4,5,6-tetrahydro-3~{H}-benzo[de]isoquinolin-1-one, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Zarkadas, E, Perot, J, Nury, H.
登録日2020-02-14
公開日2020-03-04
最終更新日2022-09-14
実験手法ELECTRON MICROSCOPY (2.82 Å)
主引用文献The Binding of Palonosetron and Other Antiemetic Drugs to the Serotonin 5-HT3 Receptor.
Structure, 28, 2020

222624

件を2024-07-17に公開中

PDB statisticsPDBj update infoContact PDBjnumon