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PDB: 54 results

8BAW
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BU of 8baw by Molmil
X-ray structure of the CeuE Homologue from Geobacillus stearothermophilus - 5-LICAM siderophore analogue complex.
Descriptor: FE (III) ION, N,N'-pentane-1,5-diylbis(2,3-dihydroxybenzamide), Siderophore ABC transporter substrate-binding protein
Authors:Blagova, E.V, Miller, A, Booth, R, Dodson, E.J, Duhme-Klair, A.K, Wilson, K.S.
Deposit date:2022-10-12
Release date:2023-07-12
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.471 Å)
Cite:Thermostable homologues of the periplasmic siderophore-binding protein CeuE from Geobacillus stearothermophilus and Parageobacillus thermoglucosidasius.
Acta Crystallogr D Struct Biol, 79, 2023
8BJ9
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X-ray structure of the CeuE Homologue from Parageobacillus thermoglucosidasius - 5LICAM complex.
Descriptor: ABC transporter, FE (III) ION, N,N'-pentane-1,5-diylbis(2,3-dihydroxybenzamide), ...
Authors:Blagova, E.V, Bennett, M, Booth, R, Dodson, E.J, Duhme-KLair, A.-K, Wilson, K.S.
Deposit date:2022-11-03
Release date:2023-07-12
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.069 Å)
Cite:Thermostable homologues of the periplasmic siderophore-binding protein CeuE from Geobacillus stearothermophilus and Parageobacillus thermoglucosidasius.
Acta Crystallogr D Struct Biol, 79, 2023
8BNW
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X-ray structure of the CeuE Homologue from Parageobacillus thermoglucosidasius - apo form
Descriptor: ABC transporter, NICKEL (II) ION, SULFATE ION
Authors:Blagova, E.V, Bennett, M, Booth, R, Dodson, E.J, Duhme-KLair, A.-K, Wilson, K.S.
Deposit date:2022-11-14
Release date:2023-07-12
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.133 Å)
Cite:Thermostable homologues of the periplasmic siderophore-binding protein CeuE from Geobacillus stearothermophilus and Parageobacillus thermoglucosidasius.
Acta Crystallogr D Struct Biol, 79, 2023
8BAX
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BU of 8bax by Molmil
X-ray structure of the CeuE Homologue from Geobacillus stearothermophilus - azotochelin complex.
Descriptor: Azotochelin, FE (III) ION, Siderophore ABC transporter substrate-binding protein
Authors:Blagova, E.V, Miller, A, Dodson, E.J, Booth, R, Duhme-Klair, A.K, Wilson, K.S.
Deposit date:2022-10-12
Release date:2023-07-12
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.38 Å)
Cite:Thermostable homologues of the periplasmic siderophore-binding protein CeuE from Geobacillus stearothermophilus and Parageobacillus thermoglucosidasius.
Acta Crystallogr D Struct Biol, 79, 2023
2HGV
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BU of 2hgv by Molmil
N-terminal GAF domain of transcriptional pleiotropic repressor CodY
Descriptor: GTP-sensing transcriptional pleiotropic repressor codY, VALINE
Authors:Wilkinson, A.J, Levdikov, V.M, Blagova, E.V.
Deposit date:2006-06-27
Release date:2006-08-15
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The Structure of CodY, a GTP- and Isoleucine-responsive Regulator of Stationary Phase and Virulence in Gram-positive Bacteria
J.Biol.Chem., 281, 2006
1T9H
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BU of 1t9h by Molmil
The crystal structure of YloQ, a circularly permuted GTPase.
Descriptor: ACETATE ION, CALCIUM ION, Probable GTPase engC, ...
Authors:Levdikov, V.M, Blagova, E.V, Brannigan, J.A, Cladiere, L, Antson, A.A, Isupov, M.N, Seror, S.J, Wilkinson, A.J.
Deposit date:2004-05-17
Release date:2004-11-02
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The Crystal Structure of YloQ, a Circularly Permuted GTPase Essential for Bacillus Subtilis Viability.
J.Mol.Biol., 340, 2004
5OD5
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BU of 5od5 by Molmil
Periplasmic binding protein CeuE complexed with a synthetic catalyst
Descriptor: 2,5,8,11,14,17,20,23-OCTAOXAPENTACOSAN-25-OL, 4-(aminomethyl)-~{N}-(pyridin-2-ylmethyl)benzenesulfonamide, Azotochelin, ...
Authors:Duhme-Klair, A.K, Raines, D.J, Clarke, J.E, Blagova, E.V, Dodson, E.J, Wilson, K.S.
Deposit date:2017-07-04
Release date:2018-08-01
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Redox-switchable siderophore anchor enables reversible artificial metalloenzyme assembly
Nat Catal, 2018
4CSB
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BU of 4csb by Molmil
Structure of the Virulence-Associated Protein VapD from the intracellular pathogen Rhodococcus equi.
Descriptor: VIRULENCE ASSOCIATED PROTEIN VAPD, octyl beta-D-glucopyranoside
Authors:Whittingham, J.L, Blagova, E.V, Finn, C.E, Luo, H, Miranda-CasoLuengo, R, Turkenburg, J.P, Leech, A.P, Walton, P.H, Meijers, W.G, Wilkinson, A.J.
Deposit date:2014-03-06
Release date:2014-04-16
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of the Virulence-Associated Protein Vapd from the Intracellular Pathogen Rhodococcus Equi.
Acta Crystallogr.,Sect.D, 70, 2014
3DD6
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BU of 3dd6 by Molmil
Crystal structure of Rph, an exoribonuclease from Bacillus anthracis at 1.7 A resolution
Descriptor: Ribonuclease PH, SULFATE ION
Authors:Rawlings, A.E, Blagova, E.V, Levdikov, V.M, Fogg, M.J, Wilson, K.S, Wilkinson, A.J, Structural Proteomics in Europe 2 (SPINE-2)
Deposit date:2008-06-05
Release date:2009-02-10
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.702 Å)
Cite:The structure of Rph, an exoribonuclease from Bacillus anthracis, at 1.7 A resolution.
Acta Crystallogr.,Sect.F, 65, 2009
2PFM
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BU of 2pfm by Molmil
Crystal Structure of Adenylosuccinate Lyase (PurB) from Bacillus anthracis
Descriptor: Adenylosuccinate lyase, MALONATE ION
Authors:Levdikov, V.M, Blagova, E.V, Baumgart, M, Moroz, O.V, Wilkinson, A.J, Wilson, K.S.
Deposit date:2007-04-05
Release date:2007-04-17
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structure of Adenylosuccinate Lyase (PurB) from Bacillus anthracis
To be Published
5LOE
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BU of 5loe by Molmil
Structure of full length Cody from Bacillus subtilis in complex with Ile
Descriptor: GTP-sensing transcriptional pleiotropic repressor CodY, ISOLEUCINE
Authors:Wilkinson, A.J, Levdikov, V.M, Blagova, E.V.
Deposit date:2016-08-09
Release date:2017-01-11
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure of the Branched-chain Amino Acid and GTP-sensing Global Regulator, CodY, from Bacillus subtilis.
J. Biol. Chem., 292, 2017
5LOJ
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BU of 5loj by Molmil
Structure of full length unliganded CodY from Bacillus subtilis
Descriptor: GTP-sensing transcriptional pleiotropic repressor CodY
Authors:Wilkinson, A.J, Levdikov, V.M, Blagova, E.V.
Deposit date:2016-08-09
Release date:2017-01-11
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.71 Å)
Cite:Structure of the Branched-chain Amino Acid and GTP-sensing Global Regulator, CodY, from Bacillus subtilis.
J. Biol. Chem., 292, 2017
5LNH
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BU of 5lnh by Molmil
Structure of full length Unliganded CodY from Bacillus subtilis
Descriptor: GTP-sensing transcriptional pleiotropic repressor CodY, SULFATE ION
Authors:Wilkinson, A.J, Levdikov, V.M, Blagova, E.V.
Deposit date:2016-08-04
Release date:2017-01-11
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure of the Branched-chain Amino Acid and GTP-sensing Global Regulator, CodY, from Bacillus subtilis.
J. Biol. Chem., 292, 2017
1K3F
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BU of 1k3f by Molmil
Uridine Phosphorylase from E. coli, Refined in the Monoclinic Crystal Lattice
Descriptor: uridine phosphorylase
Authors:Morgunova, E.Yu, Mikhailov, A.M, Popov, A.N, Blagova, E.V, Smirnova, E.A, Vainshtein, B.K, Mao, C, Armstrong, S.R, Ealick, S.E, Komissarov, A.A, Linkova, E.V, Burlakova, A.A, Mironov, A.S, Debabov, V.G.
Deposit date:2001-10-02
Release date:2001-10-10
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Atomic structure at 2.5 A resolution of uridine phosphorylase from E. coli as refined in the monoclinic crystal lattice.
FEBS Lett., 367, 1995
3O6Q
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BU of 3o6q by Molmil
The Structure of SpoIISA and SpoIISB, a Toxin - Antitoxin System
Descriptor: Stage II sporulation protein SA, Stage II sporulation protein SB
Authors:Levdikov, V.M, Blagova, E.V, Lebedev, A.A, Wilkinson, A.J, Florek, P, Barak, I.
Deposit date:2010-07-29
Release date:2010-12-08
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The structure and interactions of SpoIISA and SpoIISB, a toxin-antitoxin system in Bacillus subtilis.
J.Biol.Chem., 161, 2010
2GX5
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BU of 2gx5 by Molmil
N-terminal GAF domain of transcriptional pleiotropic repressor CodY
Descriptor: CYCLIC GUANOSINE MONOPHOSPHATE, GLYCEROL, GTP-sensing transcriptional pleiotropic repressor codY, ...
Authors:Wilkinson, A.J, Levdikov, V.M, Blagova, E.V.
Deposit date:2006-05-08
Release date:2007-04-17
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:The structure of CodY, a GTP- and isoleucine-responsive regulator of stationary phase and virulence in gram-positive bacteria.
J.Biol.Chem., 281, 2006
3O9P
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BU of 3o9p by Molmil
The structure of the Escherichia coli murein tripeptide binding protein MppA
Descriptor: L-ALA-GAMMA-D-GLU-MESO-DIAMINOPIMELIC ACID, Periplasmic murein peptide-binding protein, ZINC ION
Authors:Maqbool, A, Levdikov, V.M, Blagova, E.V, Wilkinson, A.J, Thomas, G.H.
Deposit date:2010-08-04
Release date:2011-07-06
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:Compensating Stereochemical Changes Allow Murein Tripeptide to Be Accommodated in a Conventional Peptide-binding Protein.
J.Biol.Chem., 286, 2011
5M1O
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BU of 5m1o by Molmil
Crystal structure of the large terminase nuclease from thermophilic phage G20c with bound Cobalt
Descriptor: COBALT (II) ION, Phage terminase large subunit
Authors:Xu, R.G, Jenkins, H.T, Chechik, M, Blagova, E.V, Greive, S.J, Antson, A.A.
Deposit date:2016-10-09
Release date:2016-10-26
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Viral genome packaging terminase cleaves DNA using the canonical RuvC-like two-metal catalysis mechanism.
Nucleic Acids Res., 45, 2017
1P3C
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BU of 1p3c by Molmil
Glutamyl endopeptidase from Bacillus intermedius
Descriptor: glutamyl-endopeptidase
Authors:Meijers, R, Blagova, E.V, Levdikov, V.M, Rudenskaya, G.N, Chestukhina, G.G, Akimkina, T.V, Kostrov, S.V, Lamzin, V.S, Kuranova, I.P.
Deposit date:2003-04-17
Release date:2004-04-27
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:The crystal structure of glutamyl endopeptidase from Bacillus intermedius reveals a structural link between zymogen activation and charge compensation.
Biochemistry, 43, 2004
1P3E
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BU of 1p3e by Molmil
Structure of Glu endopeptidase in complex with MPD
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, glutamyl-endopeptidase
Authors:Meijers, R, Blagova, E.V, Levdikov, V.M, Rudenskaya, G.N, Chestukhina, G.G, Akimkina, T.V, Kostrov, S.V, Lamzin, V.S, Kuranova, I.P.
Deposit date:2003-04-17
Release date:2004-04-27
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:The crystal structure of glutamyl endopeptidase from Bacillus intermedius reveals a structural link between zymogen activation and charge compensation.
Biochemistry, 43, 2004
3T91
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Structure of the Phosphatase Domain of the Cell Fate Determinant SpoIIE from Bacillus subtilis
Descriptor: MANGANESE (II) ION, Stage II sporulation protein E, alpha-D-mannopyranose, ...
Authors:Levdikov, V.M, Blagova, E.V, Wilkinson, A.J.
Deposit date:2011-08-02
Release date:2011-12-07
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.64 Å)
Cite:Structure of the phosphatase domain of the cell fate determinant SpoIIE from Bacillus subtilis.
J.Mol.Biol., 415, 2012
3T9Q
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Structure of the Phosphatase Domain of the Cell Fate Determinant SpoIIE from Bacillus subtilis (Mn presoaked)
Descriptor: MANGANESE (II) ION, Stage II sporulation protein E, beta-D-gulopyranose
Authors:Levdikov, V.M, Blagova, E.V, Wilkinson, A.J.
Deposit date:2011-08-03
Release date:2011-12-07
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.76 Å)
Cite:Structure of the phosphatase domain of the cell fate determinant SpoIIE from Bacillus subtilis.
J.Mol.Biol., 415, 2012
3TUF
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BU of 3tuf by Molmil
Structure of the SpoIIQ-SpoIIIAH pore forming complex.
Descriptor: Stage II sporulation protein Q, Stage III sporulation protein AH
Authors:Levdikov, V.M, Blagova, E.V, Wilkinson, A.J.
Deposit date:2011-09-16
Release date:2012-03-14
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.26 Å)
Cite:Structure of components of an intercellular channel complex in sporulating Bacillus subtilis.
Proc.Natl.Acad.Sci.USA, 109, 2012
1XOC
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The structure of the oligopeptide-binding protein, AppA, from Bacillus subtilis in complex with a nonapeptide.
Descriptor: Nonapeptide VDSKNTSSW, Oligopeptide-binding protein appA, ZINC ION
Authors:Levdikov, V.M, Blagova, E.V, Brannigan, J.A, Wright, L, Vagin, A.A, Wilkinson, A.J.
Deposit date:2004-10-06
Release date:2005-01-25
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:The structure of the oligopeptide-binding protein, AppA, from Bacillus subtilis in complex with a nonapeptide.
J.Mol.Biol., 345, 2005
5AP9
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Controlled lid-opening in Thermomyces lanuginosus lipase - a switch for activity and binding
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Skjold-Joergensen, J, Vind, J, Moroz, O.V, Blagova, E.V, Bhatia, V.K, Svendsen, A, Wilson, K.S, Bjerrum, M.J.
Deposit date:2015-09-15
Release date:2016-09-28
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Controlled lid-opening in Thermomyces lanuginosus lipase- An engineered switch for studying lipase function.
Biochim. Biophys. Acta, 1865, 2017

 

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