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PDB: 126 results

1HG7
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BU of 1hg7 by Molmil
High resolution structure of HPLC-12 type III antifreeze protein from Ocean Pout Macrozoarces americanus
Descriptor: HPLC-12 TYPE III ANTIFREEZE PROTEIN, SULFATE ION
Authors:Antson, A.A, Smith, D.J, Roper, D.I, Lewis, S, Caves, L.S.D, Verma, C.S, Buckley, S.L, Lillford, P.J, Hubbard, R.E.
Deposit date:2000-12-13
Release date:2001-01-31
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Understanding the Mechanism of Ice Binding by Type III Antifreeze Protein
J.Mol.Biol., 305, 2001
1BYG
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BU of 1byg by Molmil
KINASE DOMAIN OF HUMAN C-TERMINAL SRC KINASE (CSK) IN COMPLEX WITH INHIBITOR STAUROSPORINE
Descriptor: PROTEIN (C-TERMINAL SRC KINASE), STAUROSPORINE
Authors:Antson, A.A, Lamers, M.B.A.C, Scott, R.K, Williams, D.H, Hubbard, R.E.
Deposit date:1998-10-14
Release date:1999-10-14
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure of the protein tyrosine kinase domain of C-terminal Src kinase (CSK) in complex with staurosporine.
J.Mol.Biol., 285, 1999
1C9S
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BU of 1c9s by Molmil
CRYSTAL STRUCTURE OF A COMPLEX OF TRP RNA-BINDING ATTENUATION PROTEIN WITH A 53-BASE SINGLE STRANDED RNA CONTAINING ELEVEN GAG TRIPLETS SEPARATED BY AU DINUCLEOTIDES
Descriptor: SINGLE STRANDED RNA (55-MER), TRP RNA-BINDING ATTENUATION PROTEIN, TRYPTOPHAN
Authors:Antson, A.A, Dodson, E.J, Dodson, G.G, Greaves, R.B, Chen, X.-P, Gollnick, P.
Deposit date:1999-08-03
Release date:1999-09-15
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of the trp RNA-binding attenuation protein, TRAP, bound to RNA.
Nature, 401, 1999
4ZC3
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BU of 4zc3 by Molmil
DNA binding domain of small terminase SF6 phage
Descriptor: Terminase small subunit
Authors:Antson, A.A, Chechik, M, Jenkins, H.T, Greive, S.J.
Deposit date:2015-04-15
Release date:2015-12-30
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:DNA recognition for virus assembly through multiple sequence-independent interactions with a helix-turn-helix motif.
Nucleic Acids Res., 44, 2016
1WAP
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BU of 1wap by Molmil
TRP RNA-BINDING ATTENUATION PROTEIN IN COMPLEX WITH L-TRYPTOPHAN
Descriptor: TRP RNA-BINDING ATTENUATION PROTEIN, TRYPTOPHAN
Authors:Antson, A.A, Dodson, E.J, Gollnick, P.
Deposit date:1995-02-03
Release date:1995-06-03
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The structure of trp RNA-binding attenuation protein.
Nature, 374, 1995
1DTO
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BU of 1dto by Molmil
CRYSTAL STRUCTURE OF THE COMPLETE TRANSACTIVATION DOMAIN OF E2 PROTEIN FROM THE HUMAN PAPILLOMAVIRUS TYPE 16
Descriptor: REGULATORY PROTEIN E2
Authors:Antson, A.A, Burns, J.E, Moroz, O.V, Scott, D.J, Sanders, C.M, Bronstein, I.B, Dodson, G.G, Wilson, K.S, Maitland, N.
Deposit date:2000-01-13
Release date:2000-02-23
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of the intact transactivation domain of the human papillomavirus E2 protein.
Nature, 403, 2000
2TPL
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BU of 2tpl by Molmil
TYROSINE PHENOL-LYASE FROM CITROBACTER INTERMEDIUS COMPLEX WITH 3-(4'-HYDROXYPHENYL)PROPIONIC ACID, PYRIDOXAL-5'-PHOSPHATE AND CS+ ION
Descriptor: CESIUM ION, HYDROXYPHENYL PROPIONIC ACID, TYROSINE PHENOL-LYASE
Authors:Antson, A.A, Demidkina, T.V, Wilson, K.S.
Deposit date:1997-01-23
Release date:1997-04-01
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The crystal structure of Citrobacter freundii tyrosine phenol-lyase complexed with 3-(4'-hydroxyphenyl)propionic acid, together with site-directed mutagenesis and kinetic analysis, demonstrates that arginine 381 is required for substrate specificity.
Biochemistry, 36, 1997
1GZI
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BU of 1gzi by Molmil
CRYSTAL STRUCTURE OF TYPE III ANTIFREEZE PROTEIN FROM OCEAN POUT, AT 1.8 ANGSTROM RESOLUTION
Descriptor: HPLC-12 TYPE III ANTIFREEZE PROTEIN
Authors:Antson, A.A, Lewis, S, Roper, D.I, Smith, D.J, Hubbard, R.E.
Deposit date:1996-10-25
Release date:1997-09-17
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The Structure of Type III Antifreeze Protein from Ocean Pout
To be Published
8POP
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BU of 8pop by Molmil
HK97 small terminase in complex with DNA
Descriptor: DNA (31-MER), Terminase small subunit
Authors:Chechik, M, Greive, S.J, Antson, A.A, Jenkins, H.T.
Deposit date:2023-07-05
Release date:2023-08-09
Last modified:2024-08-21
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structural basis for DNA recognition by a viral genome-packaging machine.
Proc.Natl.Acad.Sci.USA, 121, 2024
4V4F
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BU of 4v4f by Molmil
The structure of the trp RNA-binding attenuation protein (TRAP) bound to a RNA molecule containing UAGAU repeats
Descriptor: 5'-R(*UP*AP*GP*AP*UP)-3', TRANSCRIPTION ATTENUATION PROTEIN MTRB, TRYPTOPHAN
Authors:Hopcroft, N.H, Manfredo, A, Wendt, A.L, Brzozowski, A.M, Gollnick, P, Antson, A.A.
Deposit date:2003-12-08
Release date:2014-07-09
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The Interaction of RNA with Trap: The Role of Triplet Repeats and Separating Spacer Nucleotides
J.Mol.Biol., 338, 2004
8CKB
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BU of 8ckb by Molmil
Asymmetric reconstruction of the crAss001 virion
Descriptor: Auxiliary capsid protein gp36, Cargo protein 1 gp45, Head fiber dimer protein gp29, ...
Authors:Bayfield, O.W, Shkoporov, A.N, Yutin, N, Khokhlova, E.V, Smith, J.L.R, Hawkins, D.E.D.P, Koonin, E.V, Hill, C, Antson, A.A.
Deposit date:2023-02-16
Release date:2023-11-22
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (4.39 Å)
Cite:Structural atlas of the most abundant human gut virus
Nature
7NT6
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BU of 7nt6 by Molmil
CryoEM structure of the Nipah virus nucleocapsid spiral clam-shaped assembly
Descriptor: Nucleoprotein, RNA (42-MER), RNA (48-MER)
Authors:Ker, D.S, Jenkins, H.T, Greive, S.J, Antson, A.A.
Deposit date:2021-03-09
Release date:2021-07-07
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:CryoEM structure of the Nipah virus nucleocapsid assembly.
Plos Pathog., 17, 2021
8CFA
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BU of 8cfa by Molmil
HK97 Prohead II as part of a DNA packaging complex
Descriptor: Major capsid subunit
Authors:Hawkins, D.E.D.P, Antson, A.A.
Deposit date:2023-02-03
Release date:2023-05-24
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.06 Å)
Cite:Insights into a viral motor: the structure of the HK97 packaging termination assembly.
Nucleic Acids Res., 51, 2023
8CEZ
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BU of 8cez by Molmil
HK97 Portal Protein In situ (prohead II)
Descriptor: Portal protein
Authors:Hawkins, D.E.D.P, Antson, A.A.
Deposit date:2023-02-02
Release date:2023-05-24
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (2.97 Å)
Cite:Insights into a viral motor: the structure of the HK97 packaging termination assembly.
Nucleic Acids Res., 51, 2023
5M1N
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BU of 5m1n by Molmil
Crystal structure of the large terminase nuclease from thermophilic phage G20c with bound Manganese
Descriptor: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, MANGANESE (II) ION, Phage terminase large subunit, ...
Authors:Xu, R.G, Jenkins, H.T, Chechik, M, Blagova, E.V, Greive, S.J, Antson, A.A.
Deposit date:2016-10-09
Release date:2016-10-26
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Viral genome packaging terminase cleaves DNA using the canonical RuvC-like two-metal catalysis mechanism.
Nucleic Acids Res., 45, 2017
2WV1
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BU of 2wv1 by Molmil
CRYSTAL STRUCTURE OF THE HLYIIR MUTANT PROTEIN WITH RESIDUES 169-186 SUBSTITUTED BY A LINKER CONTAINING TWO THROMBIN SITES
Descriptor: HEMOLYSIN II REGULATORY PROTEIN, NITRATE ION
Authors:Kovalevskiy, O.V, Solonin, A.S, Antson, A.A.
Deposit date:2009-10-12
Release date:2009-10-20
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural Investigation of Transcriptional Regulator Hlyiir: Influence of a Disordered Region on Protein Fold and Dimerization.
Proteins, 78, 2010
7NT5
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BU of 7nt5 by Molmil
CryoEM structure of the Nipah virus nucleocapsid single helical turn assembly
Descriptor: Nucleoprotein, RNA (78-MER)
Authors:Ker, D.S, Jenkins, H.T, Greive, S.J, Antson, A.A.
Deposit date:2021-03-09
Release date:2021-07-07
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:CryoEM structure of the Nipah virus nucleocapsid assembly.
Plos Pathog., 17, 2021
9FFH
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BU of 9ffh by Molmil
Native capsid of Rhodobacter microvirus Ebor computed with I4 symmetry
Descriptor: Major capsid protein
Authors:Bardy, P, MacDonald, C.I.W, Jenkins, H.T, Chechik, M, Hart, S.J, Turkenburg, J.P, Blaza, J.N, Fogg, P.C.M, Antson, A.A.
Deposit date:2024-05-23
Release date:2024-06-12
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:A stargate mechanism of Microviridae genome delivery unveiled by cryogenic electron tomography.
Biorxiv, 2024
9FFG
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BU of 9ffg by Molmil
Empty capsid of Rhodobacter microvirus Ebor computed with I4 symmetry
Descriptor: Major capsid protein
Authors:Bardy, P, MacDonald, C.I.W, Jenkins, H.T, Byrom, L, Chechik, M, Hart, S.J, Turkenburg, J.P, Blaza, J.N, Fogg, P.C.M, Antson, A.A.
Deposit date:2024-05-23
Release date:2024-06-12
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:A stargate mechanism of Microviridae genome delivery unveiled by cryogenic electron tomography.
Biorxiv, 2024
1AX4
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BU of 1ax4 by Molmil
TRYPTOPHANASE FROM PROTEUS VULGARIS
Descriptor: POTASSIUM ION, TRYPTOPHANASE
Authors:Isupov, M.N, Antson, A.A, Dodson, E.J, Dodson, G.G, Dementieva, I.S, Zakomirdina, L.N, Wilson, K.S, Dauter, Z, Lebedev, A.A, Harutyunyan, E.H.
Deposit date:1997-10-28
Release date:1998-01-28
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of tryptophanase.
J.Mol.Biol., 276, 1998
4XP7
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BU of 4xp7 by Molmil
Crystal structure of Human tRNA dihydrouridine synthase 2
Descriptor: 1-DEOXY-1-(7,8-DIMETHYL-2,4-DIOXO-3,4-DIHYDRO-2H-BENZO[G]PTERIDIN-1-ID-10(5H)-YL)-5-O-PHOSPHONATO-D-RIBITOL, tRNA-dihydrouridine(20) synthase [NAD(P)+]-like
Authors:Whelan, F, Jenkins, H.T, Griffiths, S, Byrne, R.T, Dodson, E.J, Antson, A.A.
Deposit date:2015-01-16
Release date:2015-01-28
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:From bacterial to human dihydrouridine synthase: automated structure determination.
Acta Crystallogr.,Sect.D, 71, 2015
4XVN
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BU of 4xvn by Molmil
Crystal structure of the small terminase from thermophilic phage G20C
Descriptor: Small terminase
Authors:Loredo-Varela, J, Jenkins, H.T, Chechik, M, Greive, S.J, Antson, A.A.
Deposit date:2015-01-27
Release date:2016-02-10
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of the small terminase from thermophilic phage G20C
To Be Published
6Z6E
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BU of 6z6e by Molmil
Crystal structure of the HK97 bacteriophage small terminase
Descriptor: IODIDE ION, Terminase small subunit
Authors:Fung, H.K.H, Chechik, M, Baumann, C.G, Antson, A.A.
Deposit date:2020-05-28
Release date:2021-06-09
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structural basis of DNA packaging by a ring-type ATPase from an archetypal viral system.
Nucleic Acids Res., 50, 2022
6Z6D
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BU of 6z6d by Molmil
Crystal structure of the HK97 bacteriophage large terminase
Descriptor: BROMIDE ION, Terminase large subunit
Authors:Fung, H.K.H, Chechik, M, Baumann, C.G, Antson, A.A.
Deposit date:2020-05-28
Release date:2021-06-09
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural basis of DNA packaging by a ring-type ATPase from an archetypal viral system.
Nucleic Acids Res., 50, 2022
1GQM
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BU of 1gqm by Molmil
The structure of S100A12 in a hexameric form and its proposed role in receptor signalling
Descriptor: CALCIUM ION, CALGRANULIN C
Authors:Moroz, O.V, Antson, A.A, Dodson, E.G, Burrel, H.J, Grist, S.J, Lloyd, R.M, Maitland, N.J, Dodson, G.G, Wilson, K.S, Lukanidin, E, Bronstein, I.B.
Deposit date:2001-11-26
Release date:2002-02-28
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:The Structure of S100A12 in a Hexameric Form and its Proposed Role in Receptor Signalling
Acta Crystallogr.,Sect.D, 58, 2002

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