PDB: 9786 件ウェブページステータス検索Chemie searchBIRD

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6VRP	Reverse Transcriptase Diabody with R83T Mutation 分子名称: 1,2-ETHANEDIOL, SULFATE ION, Single-chain Fv 著者 Chesterman, C, Arnold, E. 登録日 2020-02-08 公開日 2021-02-10 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Co-crystallization with diabodies: A case study for the introduction of synthetic symmetry. Structure, 29, 2021
6VUG	Diabody bound to a Reverse Transcriptase Aptamer Complex 分子名称: DNA (38-MER), GLYCEROL, Heavy chain variable fragment, ... 著者 Chesterman, C, Arnold, E. 登録日 2020-02-15 公開日 2021-02-17 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Co-crystallization with diabodies: A case study for the introduction of synthetic symmetry. Structure, 29, 2021
6WJI	2.05 Angstrom Resolution Crystal Structure of C-terminal Dimerization Domain of Nucleocapsid Phosphoprotein from SARS-CoV-2 分子名称: CHLORIDE ION, Nucleoprotein 著者 Minasov, G, Shuvalova, L, Wiersum, G, Satchell, K.J.F, Center for Structural Genomics of Infectious Diseases (CSGID) 登録日 2020-04-13 公開日 2020-04-22 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.052 Å) 主引用文献 Serodominant SARS-CoV-2 Nucleocapsid Peptides Map to Unstructured Protein Regions. Microbiol Spectr, 2023
8GS6	Structure of the SARS-CoV-2 BA.2.75 spike glycoprotein (closed state 1) 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein 著者 Anraku, Y, Tabata-Sasaki, K, Kita, S, Fukuhara, H, Maenaka, K, Hashiguchi, T. 登録日 2022-09-05 公開日 2022-10-26 最終更新日 2023-03-29 実験手法 ELECTRON MICROSCOPY (2.86 Å) 主引用文献 Virological characteristics of the SARS-CoV-2 Omicron BA.2.75 variant. Cell Host Microbe, 30, 2022
8GZ6	Crystal structure of neutralizing VHH P17 in complex with SARS-CoV-2 Alpha variant spike receptor-binding domain 分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, Nanobody P17 著者 Yamaguchi, K, Anzai, I, Maeda, R, Moriguchi, M, Watanabe, T, Imura, A, Takaori-Kondo, A, Inoue, T. 登録日 2022-09-25 公開日 2022-12-07 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (1.35 Å) 主引用文献 Structural insights into the rational design of a nanobody that binds with high affinity to the SARS-CoV-2 spike variant. J.Biochem., 173, 2023
8GZ5	Crystal structure of neutralizing VHH P17 in complex with SARS-CoV-2 Alpha variant spike receptor-binding domain 分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Nanobody P17, ... 著者 Yamaguchi, K, Anzai, I, Maeda, R, Moriguchi, M, Watanabe, T, Imura, A, Takaori-Kondo, A, Inoue, T. 登録日 2022-09-25 公開日 2022-12-07 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Structural insights into the rational design of a nanobody that binds with high affinity to the SARS-CoV-2 spike variant. J.Biochem., 173, 2023
6RQM	A blocking anti-CTLA-4 Nanobody (KN044) complexed with CTLA-4 分子名称: A blocking anti-CTLA-4 nanobody (KN044), Cytotoxic T-lymphocyte protein 4 著者 Zhang, F, Zhou, A, Gao, H. 登録日 2019-05-16 公開日 2020-07-08 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 A blocking anti-CTLA-4 Nanobody (KN044) complexed with CTLA-4 To Be Published
6TCH	Binary complex of 14-3-3 sigma and a high-affinity non-canonical 9-mer peptide binder 分子名称: 14-3-3 protein sigma, CHLORIDE ION, DLY-NVA-PPN-KCJ-SEP-PPN-B3S-BAL-PPN-LYS, ... 著者 Somsen, B.A, Ottmann, C. 登録日 2019-11-06 公開日 2020-07-01 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.801 Å) 主引用文献 Ultra-large chemical libraries for the discovery of high-affinity peptide binders. Nat Commun, 11, 2020
6RR7	Influenza A virus (A/NT/60/1968) polymerase Heterotrimer bound to 3'5' vRNA promoter and capped RNA primer 分子名称: Polymerase acidic protein, Polymerase basic protein 2, RNA (5'-D(*(M7G))-R(P*AP*AP*UP*CP*U)-3'), ... 著者 Carrique, L, Keown, J.R, Fan, H, Fodor, E, Grimes, J.M. 登録日 2019-05-17 公開日 2019-09-04 最終更新日 2024-03-06 実験手法 ELECTRON MICROSCOPY (3.01 Å) 主引用文献 Structures of influenza A virus RNA polymerase offer insight into viral genome replication. Nature, 573, 2019
5KU2	expanded poliovirus in complex with VHH 7A 分子名称: VHH 7A, VP1, VP2, ... 著者 Strauss, M, Schotte, L, Filman, D.J, Hogle, J.M. 登録日 2016-07-12 公開日 2016-11-02 最終更新日 2019-12-11 実験手法 ELECTRON MICROSCOPY (4.5 Å) 主引用文献 Cryo-electron Microscopy Structures of Expanded Poliovirus with VHHs Sample the Conformational Repertoire of the Expanded State. J. Virol., 91, 2017
5KUX	Designed influenza hemagglutinin binding protein HSB.2 分子名称: Designed influenza inhibitor protein HSB.2 著者 Lee, P.S, Bernard, S.M, Wilson, I.A. 登録日 2016-07-13 公開日 2017-06-14 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Computational design of trimeric influenza-neutralizing proteins targeting the hemagglutinin receptor binding site. Nat. Biotechnol., 35, 2017
7A6O	Crystal Structure of the Complex of the Recombinant Von Willebrand Factor AIM-A1 domain and VHH81 at 2.1 Angstrom resolution 分子名称: SULFATE ION, VHH81 Nanobody fragment, von Willebrand factor 著者 Brown, A.K, Emsley, J. 登録日 2020-08-25 公開日 2021-03-03 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.117 Å) 主引用文献 Activation of von Willebrand factor via mechanical unfolding of its discontinuous autoinhibitory module. Nat Commun, 12, 2021
6ZPL	Inward-open structure of human glycine transporter 1 in complex with a benzoylisoindoline inhibitor, sybody Sb_GlyT1#7 and bound Na and Cl ions. 分子名称: CHLORIDE ION, Endoglucanase H, SODIUM ION, ... 著者 Shahsavar, A, Stohler, P, Bourenkov, G, Zimmermann, I, Siegrist, M, Guba, W, Pinard, E, Sinning, S, Seeger, M.A, Schneider, T.R, Dawson, R.J.P, Nissen, P. 登録日 2020-07-08 公開日 2021-03-17 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (3.945 Å) 主引用文献 Structural insights into the inhibition of glycine reuptake. Nature, 591, 2021
6ZTD	Crystal structure of the BCR Fab fragment from subset #169 case P6540 分子名称: Heavy chain of the Fab fragment from BCR derived from the P6540 CLL clone, Light chain of the Fab fragment from BCR derived from the P6540 CLL clone 著者 Carriles, A.A, Minici, C, Degano, M. 登録日 2020-07-18 公開日 2021-05-26 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (3.43 Å) 主引用文献 Higher-order immunoglobulin repertoire restrictions in CLL: the illustrative case of stereotyped subsets 2 and 169. Blood, 137, 2021
5KUY	Influenza hemagglutinin H3 A/Hong Kong/1/1968 in complex with designed inhibitor protein HSB.2A 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Designed influenza inhibitor HSB.2A, ... 著者 Bernard, S.M, Wilson, I.A. 登録日 2016-07-13 公開日 2017-06-14 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.598 Å) 主引用文献 Computational design of trimeric influenza-neutralizing proteins targeting the hemagglutinin receptor binding site. Nat. Biotechnol., 35, 2017
5KWL	expanded poliovirus in complex with VHH 10E 分子名称: VHH 10E, VP1, VP2, ... 著者 Strauss, M, Schotte, L, Filman, D.J, Hogle, J.M. 登録日 2016-07-18 公開日 2016-11-02 最終更新日 2019-12-18 実験手法 ELECTRON MICROSCOPY (4.5 Å) 主引用文献 Cryo-electron Microscopy Structures of Expanded Poliovirus with VHHs Sample the Conformational Repertoire of the Expanded State. J. Virol., 91, 2017
7P56	Variant Surface Glycoprotein 2 (VSG2, MiTat1.2, VSG221) Bound to Calcium 分子名称: CALCIUM ION, Variant surface glycoprotein MITAT 1.2, alpha-D-mannopyranose-(1-6)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ... 著者 Gkeka, A, Aresta-Branco, F, Stebbins, C.E, Papavasiliou, F.N. 登録日 2021-07-14 公開日 2022-07-27 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (1.735 Å) 主引用文献 Immunodominant surface epitopes power immune evasion in the African trypanosome. Cell Rep, 42, 2023
7P5D	Variant Surface Glycoprotein 3 (VSG3, MiTat1.3, VSG224) mutant (serine 317 and 319 to alanine) 分子名称: Variant surface glycoprotein, alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose 著者 Gkeka, A, Aresta-Branco, F, Stebbins, C.E, Papavasiliou, F.N. 登録日 2021-07-14 公開日 2022-07-27 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (1.42 Å) 主引用文献 Immunodominant surface epitopes power immune evasion in the African trypanosome. Cell Rep, 42, 2023
7P57	VSG2 mutant structure lacking the calcium binding pocket 分子名称: Variant surface glycoprotein MITAT 1.2, alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose 著者 Gkeka, A, Aresta-Branco, F, Stebbins, C.E, Papavasiliou, F.N. 登録日 2021-07-14 公開日 2022-07-27 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (1.961 Å) 主引用文献 Immunodominant surface epitopes power immune evasion in the African trypanosome. Cell Rep, 42, 2023
7P59	Variant Surface Glycoprotein 3 (VSG3, MiTat1.3, VSG224) with two O-linked post-translational modifications 分子名称: Variant surface glycoprotein, alpha-D-glucopyranose, alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose 著者 Gkeka, A, Arest-Branco, F, Stebbins, C.E, Papavasiliou, F.N. 登録日 2021-07-14 公開日 2022-07-27 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (1.27 Å) 主引用文献 Immunodominant surface epitopes power immune evasion in the African trypanosome. Cell Rep, 42, 2023
7P5B	Variant Surface Glycoprotein 3 (VSG3, MiTat1.3, VSG224) mutant (serine 319 to alanine), single O-linked glycosylated at Ser317 分子名称: Variant surface glycoprotein, alpha-D-glucopyranose, alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose 著者 Gkeka, A, Aresta-Branco, F, Stebbins, C.E, Papavasiliou, F.N. 登録日 2021-07-14 公開日 2022-07-27 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (1.13 Å) 主引用文献 Immunodominant surface epitopes power immune evasion in the African trypanosome. Cell Rep, 42, 2023
7P5A	Variant Surface Glycoprotein 3 (VSG3, MiTat1.3, VSG224) mutant (serine 317 to alanine), single O-linked glycosylated at Ser319 分子名称: Variant surface glycoprotein, alpha-D-glucopyranose, alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose 著者 Gkeka, A, Aresta-Branco, F, Stebbins, C.E, Papavasiliou, F.N. 登録日 2021-07-14 公開日 2022-07-27 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Immunodominant surface epitopes power immune evasion in the African trypanosome. Cell Rep, 42, 2023
7A56	Schmallenberg Virus Envelope Glycoprotein Gc Fusion Domains in Postfusion Conformation 分子名称: CHLORIDE ION, Envelopment polyprotein, PHOSPHATE ION, ... 著者 Hellert, J, Guardado-Calvo, P, Rey, F.A. 登録日 2020-08-20 公開日 2021-09-01 最終更新日 2023-03-15 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Structure, function, and evolution of the Orthobunyavirus membrane fusion glycoprotein. Cell Rep, 42, 2023
7A57	La Crosse Virus Envelope Glycoprotein Gc W1066H Mutant Fusion Domains in Postfusion Conformation 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Envelopment polyprotein 著者 Hellert, J, Guardado-Calvo, P, Rey, F.A. 登録日 2020-08-20 公開日 2021-09-01 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (3.155 Å) 主引用文献 Structure, function, and evolution of the Orthobunyavirus membrane fusion glycoprotein. Cell Rep, 42, 2023
2QTJ	Solution structure of human dimeric immunoglobulin A 分子名称: Ig alpha-1 chain C region, Kappa light chain IgA1 著者 Bonner, A, Furtado, P.B, Almogren, A, Kerr, M.A, Perkins, S.J. 登録日 2007-08-02 公開日 2008-01-22 最終更新日 2024-02-21 実験手法 SOLUTION SCATTERING 主引用文献 Implications of the near-planar solution structure of human myeloma dimeric IgA1 for mucosal immunity and IgA nephropathy J.Immunol., 180, 2008

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