Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4EDI
DownloadVisualize
BU of 4edi by Molmil
Disulfide bonded EutL from Clostridium perfringens
分子名称: Ethanolamine utilization protein, SODIUM ION
著者Thompson, M.C, Cascio, D, Crowley, C.S, Kopstein, J.S, Yeates, T.O.
登録日2012-03-27
公開日2013-03-27
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.998 Å)
主引用文献An allosteric model for control of pore opening by substrate binding in the EutL microcompartment shell protein.
Protein Sci., 24, 2015
5B56
DownloadVisualize
BU of 5b56 by Molmil
Crystal structure of HIV-1 VPR C-Terminal domain and DIBB-M-Importin-Alpha2 complex
分子名称: Importin subunit alpha-1, Protein Vpr
著者Miyatake, H, Sanjoh, A, Matusda, G, Murakami, T, Murakami, H, Hagiwara, K, Yokoyama, M, Sato, H, Miyamoto, Y, Dohmae, N, Aida, Y.
登録日2016-04-25
公開日2016-06-01
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Molecular Mechanism of HIV-1 Vpr for Binding to Importin-alpha
J.Mol.Biol., 428, 2016
3AB4
DownloadVisualize
BU of 3ab4 by Molmil
Crystal structure of feedback inhibition resistant mutant of aspartate kinase from Corynebacterium glutamicum in complex with lysine and threonine
分子名称: Aspartokinase, LYSINE, THREONINE
著者Yoshida, A, Tomita, T, Kuzuyama, T, Nishiyama, M.
登録日2009-11-30
公開日2010-06-23
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.47 Å)
主引用文献Mechanism of concerted inhibition of {alpha}2{beta}2-type heterooligomeric aspartate kinase from Corynebacterium glutamicum
J.Biol.Chem., 285, 2010
4EE7
DownloadVisualize
BU of 4ee7 by Molmil
Crystal Structure of the Novel Phenazine Prenyltransferase EpzP in complex with S-thiolodiphosphate (methylated)
分子名称: CHLORIDE ION, Prenyltransferase, SULFATE ION, ...
著者Zocher, G, Stehle, T.
登録日2012-03-28
公開日2012-11-14
最終更新日2017-11-15
実験手法X-RAY DIFFRACTION (1.67 Å)
主引用文献Structure-based engineering increased the catalytic turnover rate of a novel phenazine prenyltransferase.
Plos One, 7, 2012
3U0U
DownloadVisualize
BU of 3u0u by Molmil
Crystal structure of the DB1883-D(CGCGAATTCGCG)2 complex at 1.24 A resolution
分子名称: 2-(4'-carbamimidoylbiphenyl-4-yl)-1H-indole-6-carboximidamide, 5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3', MAGNESIUM ION
著者Wei, D.G, Neidle, S.
登録日2011-09-29
公開日2012-09-12
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.24 Å)
主引用文献Small-molecule binding to the DNA minor groove is mediated by a conserved water cluster.
J.Am.Chem.Soc., 135, 2013
4E45
DownloadVisualize
BU of 4e45 by Molmil
Crystal structure of the hMHF1/hMHF2 Histone-Fold Tetramer in Complex with Fanconi Anemia Associated Helicase hFANCM
分子名称: Centromere protein S, Centromere protein X, Fanconi anemia group M protein, ...
著者Fox III, D, Zhao, Y, Yang, W, Weidong, W.
登録日2012-03-12
公開日2013-03-20
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal Structures Reveal that FANCM remodels the MHF Tetramer in favor of binding Branched DNA
To be Published
5AP3
DownloadVisualize
BU of 5ap3 by Molmil
Naturally Occurring Mutations in the MPS1 Gene Predispose Cells to Kinase Inhibitor Drug Resistance.
分子名称: 1,2-ETHANEDIOL, 2-(2-(2-(2-(2-(2-ETHOXYETHOXY)ETHOXY)ETHOXY)ETHOXY)ETHOXY)ETHANOL, 9-CYCLOPENTYL-2-[[2-METHOXY-4-[(1-METHYLPIPERIDIN-4-YL)OXY]-PHENYL]AMINO]-7-METHYL-7,9-DIHYDRO-8H-PURIN-8-ONE, ...
著者Gurden, M.D, Westwood, I.M, Faisal, A, Naud, S, Cheung, K.J, McAndrew, C, Wood, A, Schmitt, J, Boxall, K, Mak, G, Workman, P, Burke, R, Hoelder, S, Blagg, J, van Montfort, R.L.M, Linardopoulos, S.
登録日2015-09-14
公開日2015-09-23
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Naturally Occurring Mutations in the Mps1 Gene Predispose Cells to Kinase Inhibitor Drug Resistance.
Cancer Res., 75, 2015
3TK2
DownloadVisualize
BU of 3tk2 by Molmil
Crystallographic structure of phenylalanine hydroxylase from Chromobacterium violaceum cocrystallized with phenylalanine in a site distal to the active site
分子名称: COBALT (II) ION, PHENYLALANINE, Phenylalanine-4-hydroxylase
著者Ronau, J.A, Abu-Omar, M.M, Das, C.
登録日2011-08-25
公開日2012-09-05
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献An additional substrate binding site in a bacterial phenylalanine hydroxylase.
Eur.Biophys.J., 42, 2013
3AOD
DownloadVisualize
BU of 3aod by Molmil
Structures of the multidrug exporter AcrB reveal a proximal multisite drug-binding pocket
分子名称: (4S,4AS,5AR,12AS)-4,7-BIS(DIMETHYLAMINO)-3,10,12,12A-TETRAHYDROXY-1,11-DIOXO-1,4,4A,5,5A,6,11,12A-OCTAHYDROTETRACENE-2- CARBOXAMIDE, Acriflavine resistance protein B, RIFAMPICIN
著者Nakashima, R, Sakurai, K, Yamaguchi, A.
登録日2010-09-23
公開日2011-11-30
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Structures of the multidrug exporter AcrB reveal a proximal multisite drug-binding pocket
Nature, 480, 2011
5BKC
DownloadVisualize
BU of 5bkc by Molmil
Crystal structure of AAD-1 in complex with (R)-diclofop, Mn(II), and 2-oxoglutarate
分子名称: (2R)-2-{4-[(3,5-dichloropyridin-2-yl)oxy]phenoxy}propanoic acid, (R)-phenoxypropionate/alpha-ketoglutarate-dioxygenase, 2-OXOGLUTARIC ACID, ...
著者Chekan, J.R, Nair, S.K.
登録日2019-06-02
公開日2019-06-12
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Molecular basis for enantioselective herbicide degradation imparted by aryloxyalkanoate dioxygenases in transgenic plants.
Proc.Natl.Acad.Sci.USA, 116, 2019
3TKM
DownloadVisualize
BU of 3tkm by Molmil
Crystal structure PPAR delta binding GW0742
分子名称: GLYCEROL, Peroxisome proliferator-activated receptor delta, {4-[({2-[3-fluoro-4-(trifluoromethyl)phenyl]-4-methyl-1,3-thiazol-5-yl}methyl)sulfanyl]-2-methylphenoxy}acetic acid
著者Trivella, D.B.B, Batista, F.H, Polikarpov, I.
登録日2011-08-27
公開日2012-07-04
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.953 Å)
主引用文献Structural Insights into Human Peroxisome Proliferator Activated Receptor Delta (PPAR-Delta) Selective Ligand Binding.
Plos One, 7, 2012
4EMP
DownloadVisualize
BU of 4emp by Molmil
Crystal structure of the mutant of ClpP E137A from Staphylococcus aureus
分子名称: ATP-dependent Clp protease proteolytic subunit
著者Ye, F, Zhang, J, Liu, H, Luo, C, Yang, C.-G.
登録日2012-04-12
公開日2013-04-17
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Helix unfolding/refolding characterizes the functional dynamics of Staphylococcus aureus Clp protease
J.Biol.Chem., 288, 2013
5BMM
DownloadVisualize
BU of 5bmm by Molmil
Src in complex with DNA-templated macrocyclic inhibitor MC25b
分子名称: Proto-oncogene tyrosine-protein kinase Src, macrocyclic inhibitor MC25b
著者Georghiou, G, Guja, K.E, Aleem, S, Kleiner, R.E, Liu, D.R, Miller, W.T, Garcia-Diaz, M, Seeliger, M.A.
登録日2015-05-22
公開日2016-09-21
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural and Biochemical Basis for Intracellular Kinase Inhibition by Src-specific Peptidic Macrocycles.
Cell Chem Biol, 23, 2016
4E4V
DownloadVisualize
BU of 4e4v by Molmil
The crystal structure of the dimeric human importin alpha 1 at 2.5 angstrom resolution.
分子名称: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, GLYCEROL, Importin subunit alpha-2
著者Hang, P.C, Miknis, Z.M, Franke, W.A, Umland, T.C, Schultz, L.W.
登録日2012-03-13
公開日2013-05-29
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.5283 Å)
主引用文献The crystal structure of the dimeric human importin alpha 1 at 2.5 angstrom resolution.
To be Published
4OE4
DownloadVisualize
BU of 4oe4 by Molmil
Crystal Structure of Yeast ALDH4A1 Complexed with NAD+
分子名称: Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
著者Tanner, J.J.
登録日2014-01-11
公開日2014-02-19
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.168 Å)
主引用文献Structural Studies of Yeast Delta (1)-Pyrroline-5-carboxylate Dehydrogenase (ALDH4A1): Active Site Flexibility and Oligomeric State.
Biochemistry, 53, 2014
3A71
DownloadVisualize
BU of 3a71 by Molmil
High resolution structure of Penicillium chrysogenum alpha-L-arabinanase
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, ACETATE ION, Exo-arabinanase
著者Sogabe, Y.
登録日2009-09-11
公開日2010-09-15
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.14 Å)
主引用文献High-resolution structure of exo-arabinanase from Penicillium chrysogenum
Acta Crystallogr.,Sect.D, 67, 2011
4ENH
DownloadVisualize
BU of 4enh by Molmil
Crystal Structure of Human Cytochrome P450 CYP46A1 with Fluvoxamine Bound
分子名称: Cholesterol 24-hydroxylase, Fluvoxamine, PROTOPORPHYRIN IX CONTAINING FE
著者Stout, C.D, Mast, N, Pikuleva, I.A.
登録日2012-04-13
公開日2012-08-22
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献In Silico and Intuitive Predictions of CYP46A1 Inhibition by Marketed Drugs with Subsequent Enzyme Crystallization in Complex with Fluvoxamine.
Mol.Pharmacol., 82, 2012
3U2N
DownloadVisualize
BU of 3u2n by Molmil
Crystal structure of DNA(CGCGAATTCGCG)2 at 1.25 angstroms
分子名称: 5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3', MAGNESIUM ION
著者Wei, D.G, Neidle, S.
登録日2011-10-04
公開日2013-04-17
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Small-molecule binding to the DNA minor groove is mediated by a conserved water cluster.
J.Am.Chem.Soc., 135, 2013
4EO5
DownloadVisualize
BU of 4eo5 by Molmil
Yeast Asf1 bound to H3/H4G94P mutant
分子名称: ACETATE ION, GLYCEROL, Histone H3.2, ...
著者Scorgie, J.K, Churchill, M.E.
登録日2012-04-13
公開日2012-06-13
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献The conformational flexibility of the C-terminus of histone H4 promotes histone octamer and nucleosome stability and yeast viability.
Epigenetics Chromatin, 5, 2012
3TM2
DownloadVisualize
BU of 3tm2 by Molmil
Crystal structure of mature ThnT with a covalently bound product mimic
分子名称: (2R)-N-(4-chloro-3-oxobutyl)-2,4-dihydroxy-3,3-dimethylbutanamide, cysteine transferase
著者Schildbach, J.F, Wright, N.T, Buller, A.R.
登録日2011-08-30
公開日2012-07-04
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Autoproteolytic Activation of ThnT Results in Structural Reorganization Necessary for Substrate Binding and Catalysis.
J.Mol.Biol., 422, 2012
3TN5
DownloadVisualize
BU of 3tn5 by Molmil
Crystal structure of GkaP mutant Y99L from Geobacillus kaustophilus HTA426
分子名称: COBALT (II) ION, PHOSPHATE ION, Phosphotriesterase
著者An, J, Zhang, Z, Zhang, Y, Feng, Y, Wu, G.
登録日2011-09-01
公開日2012-09-12
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Engineering a thermostable lactonase for enhanced phosphotriesterase activity against organophosphate pesticides
to be published
4OSI
DownloadVisualize
BU of 4osi by Molmil
Crystal structure of the TAL effector dHax3 with NI RVD at 2.8 angstrom resolution
分子名称: DNA (5'-D(*AP*GP*AP*GP*AP*GP*AP*TP*AP*AP*AP*GP*GP*GP*AP*CP*A)-3'), DNA (5'-D(*TP*GP*TP*CP*CP*CP*TP*TP*TP*AP*TP*CP*TP*CP*TP*CP*T)-3'), Hax3
著者Deng, D, Wu, J.P, Yan, C.Y, Pan, X.J, Yan, N.
登録日2014-02-13
公開日2014-05-28
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.849 Å)
主引用文献Revisiting the TALE repeat
Protein Cell, 5, 2014
4OT1
DownloadVisualize
BU of 4ot1 by Molmil
Structural Basis for the Recognition of Human Cytomegalovirus Glycoprotein B by the Neutralizing Human Antibody SM5-1
分子名称: 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Envelope glycoprotein B, ...
著者Diestel, U, Muller, Y.A.
登録日2014-02-13
公開日2014-08-13
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.11 Å)
主引用文献Structural basis for the recognition of human cytomegalovirus glycoprotein B by a neutralizing human antibody.
Plos Pathog., 10, 2014
3U5K
DownloadVisualize
BU of 3u5k by Molmil
Crystal Structure of the first bromodomain of human BRD4 in complex with Midazolam
分子名称: 8-chloro-6-(2-fluorophenyl)-1-methyl-4H-imidazo[1,5-a][1,4]benzodiazepine, Bromodomain-containing protein 4
著者Filippakopoulos, P, Picaud, S, Felletar, I, Fedorov, O, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Weigelt, J, Bountra, C, Knapp, S, Structural Genomics Consortium (SGC)
登録日2011-10-11
公開日2011-11-23
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Benzodiazepines and benzotriazepines as protein interaction inhibitors targeting bromodomains of the BET family.
Bioorg.Med.Chem., 20, 2012
1NVM
DownloadVisualize
BU of 1nvm by Molmil
Crystal structure of a bifunctional aldolase-dehydrogenase : sequestering a reactive and volatile intermediate
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 4-hydroxy-2-oxovalerate aldolase, MANGANESE (II) ION, ...
著者Manjasetty, A.B, Powlowski, J, Vrielink, A.
登録日2003-02-04
公開日2003-06-17
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal structure of a bifunctional aldolase-dehydrogenase: Sequestering a reactive and volatile intermediate
Proc.Natl.Acad.Sci.USA, 100, 2003

226707

件を2024-10-30に公開中

PDB statisticsPDBj update infoContact PDBjnumon