PDB: 26577 resultsInfo pagesStatus searchChemie searchBIRD

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7SYG	Structure of the HCV IRES binding to the 40S ribosomal subunit, closed conformation. Structure 1(delta dII) Descriptor: 18S rRNA, 40S ribosomal protein S2, 40S ribosomal protein S24, ... Authors: Brown, Z.P, Abaeva, I.S, De, S, Hellen, C.U.T, Pestova, T.V, Frank, J. Deposit date: 2021-11-25 Release date: 2022-07-13 Last modified: 2024-02-28 Method: ELECTRON MICROSCOPY (4.3 Å) Cite: Molecular architecture of 40S initiation complexes on the Hepatitis C virus IRES: from ribosomal attachment to eIF5B-mediated reorientation of initiator tRNA To Be Published
7SYI	Structure of the HCV IRES binding to the 40S ribosomal subunit, closed conformation. Structure 3(delta dII) Descriptor: 18S rRNA, 40S ribosomal protein S21, 40S ribosomal protein S24, ... Authors: Brown, Z.P, Abaeva, I.S, De, S, Hellen, C.U.T, Pestova, T.V, Frank, J. Deposit date: 2021-11-25 Release date: 2022-07-13 Last modified: 2024-06-05 Method: ELECTRON MICROSCOPY (4.5 Å) Cite: Molecular architecture of 40S translation initiation complexes on the hepatitis C virus IRES. Embo J., 41, 2022
7SYM	Structure of the HCV IRES bound to the 40S ribosomal subunit, head opening. Structure 7(delta dII) Descriptor: 18S rRNA, 40S ribosomal protein S2, 40S ribosomal protein S21, ... Authors: Brown, Z.P, Abaeva, I.S, De, S, Hellen, C.U.T, Pestova, T.V, Frank, J. Deposit date: 2021-11-25 Release date: 2022-07-13 Last modified: 2024-02-28 Method: ELECTRON MICROSCOPY (4.8 Å) Cite: Comprehensive structural overview of the HCV IRES-mediated translation initiation pathway To Be Published
7Z7P	Structure of the fluorescent protein NeonCyan0.95 at pH 5.6 Descriptor: NeonCyan0.95, SULFATE ION Authors: Depernet, H, Dupuy, J, Royant, A. Deposit date: 2022-03-16 Release date: 2022-05-04 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (1.95 Å) Cite: Cyan fluorescent proteins derived from mNeonGreen. Protein Eng.Des.Sel., 35, 2022
7Z7O	Structure of the fluorescent protein NeonCyan0.95 at pH 7.5 Descriptor: NeonCyan0.95 Authors: Clavel, D, Dupuy, J, Royant, A. Deposit date: 2022-03-16 Release date: 2022-05-04 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (1.51 Å) Cite: Cyan fluorescent proteins derived from mNeonGreen. Protein Eng.Des.Sel., 35, 2022
7Z7Q	Structure of the T207D single-point mutant of the fluorescent protein NeonCyan1 at pH 6.5 Descriptor: NeonCyan1 Authors: Duarte, K, Dupuy, J, Royant, A. Deposit date: 2022-03-16 Release date: 2022-05-04 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (1.6 Å) Cite: Cyan fluorescent proteins derived from mNeonGreen. Protein Eng.Des.Sel., 35, 2022
3JB9	Cryo-EM structure of the yeast spliceosome at 3.6 angstrom resolution Descriptor: ADENOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ... Authors: Yan, C, Hang, J, Wan, R, Huang, M, Wong, C, Shi, Y. Deposit date: 2015-08-09 Release date: 2015-09-23 Last modified: 2024-03-20 Method: ELECTRON MICROSCOPY (3.6 Å) Cite: Structure of a yeast spliceosome at 3.6-angstrom resolution Science, 349, 2015
6AHD	The Cryo-EM Structure of Human Pre-catalytic Spliceosome (B complex) at 3.8 angstrom resolution Descriptor: 116 kDa U5 small nuclear ribonucleoprotein component, Brr2, U5 small nuclear ribonucleoprotein 200 kDa helicase, ... Authors: Zhan, X, Yan, C, Zhang, X, Shi, Y. Deposit date: 2018-08-17 Release date: 2018-11-14 Last modified: 2021-06-30 Method: ELECTRON MICROSCOPY (3.8 Å) Cite: Structures of the human pre-catalytic spliceosome and its precursor spliceosome. Cell Res., 28, 2018
3JAG	Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UAA stop codon Descriptor: 18S ribosomal RNA, 28S ribosomal RNA, 5.8S ribosomal RNA, ... Authors: Brown, A, Shao, S, Murray, J, Hegde, R.S, Ramakrishnan, V. Deposit date: 2015-06-10 Release date: 2015-08-12 Last modified: 2018-07-18 Method: ELECTRON MICROSCOPY (3.65 Å) Cite: Structural basis for stop codon recognition in eukaryotes. Nature, 524, 2015
3JAH	Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UAG stop codon Descriptor: 18S ribosomal RNA, 28S ribosomal RNA, 5.8S ribosomal RNA, ... Authors: Brown, A, Shao, S, Murray, J, Hegde, R.S, Ramakrishnan, V. Deposit date: 2015-06-10 Release date: 2015-08-12 Last modified: 2018-07-18 Method: ELECTRON MICROSCOPY (3.45 Å) Cite: Structural basis for stop codon recognition in eukaryotes. Nature, 524, 2015
6R5Q	Structure of XBP1u-paused ribosome nascent chain complex (post-state) Descriptor: 18S ribosomal RNA, 28S ribosomal RNA, 40S ribosomal protein S12, ... Authors: Shanmuganathan, V, Cheng, J, Berninghausen, O, Beckmann, R. Deposit date: 2019-03-25 Release date: 2019-07-10 Last modified: 2019-10-30 Method: ELECTRON MICROSCOPY (3 Å) Cite: Structural and mutational analysis of the ribosome-arresting human XBP1u. Elife, 8, 2019
6SB2	cryo-EM structure of mTORC1 bound to active RagA/C GTPases Descriptor: GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, Ras-related GTP-binding protein A, ... Authors: Anandapadamanaban, M, Berndt, A, Masson, G.R, Perisic, O, Williams, R.L. Deposit date: 2019-07-18 Release date: 2019-10-16 Last modified: 2024-05-22 Method: ELECTRON MICROSCOPY (6.2 Å) Cite: Architecture of human Rag GTPase heterodimers and their complex with mTORC1. Science, 366, 2019
6BCU	Cryo-EM structure of the activated RHEB-mTORC1 refined to 3.4 angstrom Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Eukaryotic translation initiation factor 4E-binding protein 1, GTP-binding protein Rheb, ... Authors: Pavletich, N.P, Yang, H. Deposit date: 2017-10-20 Release date: 2017-12-20 Last modified: 2024-03-13 Method: ELECTRON MICROSCOPY (3.8 Å) Cite: Mechanisms of mTORC1 activation by RHEB and inhibition by PRAS40. Nature, 552, 2017
6BCX	mTORC1 structure refined to 3.0 angstroms Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Eukaryotic translation initiation factor 4E-binding protein 1, MAGNESIUM ION, ... Authors: Pavletich, N.P, Yang, H. Deposit date: 2017-10-20 Release date: 2017-12-20 Last modified: 2024-03-13 Method: ELECTRON MICROSCOPY (3.23 Å) Cite: Mechanisms of mTORC1 activation by RHEB and inhibition by PRAS40. Nature, 552, 2017
3B3B	Crystal structure of E. coli Aminopeptidase N in complex with tryptophan Descriptor: Aminopeptidase N, GLYCEROL, MALONATE ION, ... Authors: Addlagatta, A. Deposit date: 2007-10-19 Release date: 2008-05-06 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (1.85 Å) Cite: Structural basis for the unusual specificity of Escherichia coli aminopeptidase N. Biochemistry, 47, 2008
3JAI	Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UGA stop codon Descriptor: 18S ribosomal RNA, 28S ribosomal RNA, 5.8S ribosomal RNA, ... Authors: Brown, A, Shao, S, Murray, J, Hegde, R.S, Ramakrishnan, V. Deposit date: 2015-06-10 Release date: 2015-08-12 Last modified: 2018-07-18 Method: ELECTRON MICROSCOPY (3.65 Å) Cite: Structural basis for stop codon recognition in eukaryotes. Nature, 524, 2015
6SB0	cryo-EM structure of mTORC1 bound to PRAS40-fused active RagA/C GTPases Descriptor: GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, Proline-rich AKT1 substrate 1, ... Authors: Anandapadamanaban, M, Berndt, A, Masson, G.R, Perisic, O, Williams, R.L. Deposit date: 2019-07-18 Release date: 2019-10-16 Last modified: 2024-05-22 Method: ELECTRON MICROSCOPY (5.5 Å) Cite: Architecture of human Rag GTPase heterodimers and their complex with mTORC1. Science, 366, 2019
6R6P	Structure of XBP1u-paused ribosome nascent chain complex (rotated state) Descriptor: 18S rRNA, 28S ribosomal RNA, 40S ribosomal protein S12, ... Authors: Shanmuganathan, V, Cheng, J, Berninghausen, O, Beckmann, R. Deposit date: 2019-03-27 Release date: 2019-07-10 Last modified: 2024-05-22 Method: ELECTRON MICROSCOPY (3.1 Å) Cite: Structural and mutational analysis of the ribosome-arresting human XBP1u. Elife, 8, 2019
6B3J	3.3 angstrom phase-plate cryo-EM structure of a biased agonist-bound human GLP-1 receptor-Gs complex Descriptor: Exendin-P5, Glucagon-like peptide 1 receptor, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ... Authors: Liang, Y.L, Khoshouei, M, Glukhova, A, Furness, S.G.B, Koole, C, Zhao, P, Clydesdale, L, Thal, D.M, Radjainia, M, Danev, R, Baumeister, W, Wang, M.W, Miller, L.J, Christopoulos, A, Sexton, P.M, Wootten, D. Deposit date: 2017-09-22 Release date: 2018-02-21 Last modified: 2020-01-15 Method: ELECTRON MICROSCOPY (3.3 Å) Cite: Phase-plate cryo-EM structure of a biased agonist-bound human GLP-1 receptor-Gs complex. Nature, 555, 2018
6R7Q	Structure of XBP1u-paused ribosome nascent chain complex with Sec61. Descriptor: 18S ribosomal RNA, 28S ribosomal RNA, 40S ribosomal protein S12, ... Authors: Shanmuganathan, V, Cheng, J, Braunger, K, Berninghausen, O, Beatrix, B, Beckmann, R. Deposit date: 2019-03-29 Release date: 2019-07-10 Last modified: 2024-05-22 Method: ELECTRON MICROSCOPY (3.9 Å) Cite: Structural and mutational analysis of the ribosome-arresting human XBP1u. Elife, 8, 2019
6BK8	S. cerevisiae spliceosomal post-catalytic P complex Descriptor: GUANOSINE-5'-TRIPHOSPHATE, INOSITOL HEXAKISPHOSPHATE, Lea1, ... Authors: Liu, S, Li, X, Zhou, Z.H, Zhao, R. Deposit date: 2017-11-07 Release date: 2018-02-21 Last modified: 2020-10-14 Method: ELECTRON MICROSCOPY (3.3 Å) Cite: Structure of the yeast spliceosomal postcatalytic P complex. Science, 358, 2017
6R6G	Structure of XBP1u-paused ribosome nascent chain complex with SRP. Descriptor: 18S ribosomal RNA, 28S ribosomal RNA, 40S ribosomal protein S12, ... Authors: Shanmuganathan, V, Cheng, J, Braunger, K, Berninghausen, O, Beatrix, B, Beckmann, R. Deposit date: 2019-03-27 Release date: 2019-07-10 Last modified: 2019-10-30 Method: ELECTRON MICROSCOPY (3.7 Å) Cite: Structural and mutational analysis of the ribosome-arresting human XBP1u. Elife, 8, 2019
6CFQ	Crystal structure of the D141N variant of catalase-peroxidase from B. pseudomallei with INH bound Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, CHLORIDE ION, Catalase-peroxidase, ... Authors: Loewen, P.C. Deposit date: 2018-02-16 Release date: 2018-02-28 Last modified: 2023-10-04 Method: X-RAY DIFFRACTION (1.72 Å) Cite: Crystal structure of the D141N variant of catalase-peroxidase from B. pseudomallei with INH bound To be published
3UT0	Crystal structure of exo-1,3/1,4-beta-glucanase (EXOP) from Pseudoalteromonas sp. BB1 Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, Exo-1,3/1,4-beta-glucanase, ... Authors: Nakatani, Y, Cutfield, S.M, Cutfield, J.F. Deposit date: 2011-11-24 Release date: 2011-12-21 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Structure and activity of exo-1,3/1,4-beta-glucanase from marine bacterium Pseudoalteromonas sp. BB1 showing a novel C-terminal domain Febs J., 2011
3USZ	Crystal structure of truncated exo-1,3/1,4-beta-glucanase (EXOP) from Pseudoalteromonas sp. BB1 Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, Exo-1,3/1,4-beta-glucanase, ... Authors: Nakatani, Y, Cutfield, S.M, Cutfield, J.F. Deposit date: 2011-11-24 Release date: 2011-12-21 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Structure and activity of exo-1,3/1,4-beta-glucanase from marine bacterium Pseudoalteromonas sp. BB1 showing a novel C-terminal domain Febs J., 2011

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