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PDB: 1650 results

6NKO
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BU of 6nko by Molmil
Crystal structure of ForH
Descriptor: ForH
Authors:Zheng, J, Irani, S, Zhang, Y.
Deposit date:2019-01-07
Release date:2019-04-17
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.403 Å)
Cite:Identification of the Formycin A Biosynthetic Gene Cluster from Streptomyces kaniharaensis Illustrates the Interplay between Biological Pyrazolopyrimidine Formation and de Novo Purine Biosynthesis.
J. Am. Chem. Soc., 141, 2019
1NYK
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BU of 1nyk by Molmil
Crystal Structure of the Rieske protein from Thermus thermophilus
Descriptor: FE2/S2 (INORGANIC) CLUSTER, MAGNESIUM ION, Rieske iron-sulfur protein
Authors:Hunsicker-Wang, L.M, Heine, A, Chen, Y, Luna, E.P, Todaro, T, Zhang, Y.M, Williams, P.A, McRee, D.E, Hirst, J, Stout, C.D, Fee, J.A.
Deposit date:2003-02-12
Release date:2003-06-24
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.31 Å)
Cite:High resolution structure of the soluble, respiratory-type Rieske protein from Thermus thermophilus: Analysis and Comparison
Biochemistry, 42, 2003
2VI5
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BU of 2vi5 by Molmil
LUMAZINE SYNTHASE FROM MYCOBACTERIUM TUBERCULOSIS BOUND TO N-6-(ribitylamino)pyrimidine-2,4(1H,3H)-dione-5-yl-propionamide
Descriptor: 1-deoxy-1-{[(5S)-2,6-dioxo-5-(propanoylamino)-1,2,5,6-tetrahydropyrimidin-4-yl]amino}-D-ribitol, 6,7-DIMETHYL-8-RIBITYLLUMAZINE SYNTHASE, PHOSPHATE ION, ...
Authors:Morgunova, E, Zhang, Y, Jin, G, Illarionov, B, Bacher, A, Fischer, M, Cushman, M, Ladenstein, R.
Deposit date:2007-11-27
Release date:2008-04-08
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:A New Series of N-[2,4-Dioxo-6-D-Ribitylamino-1,2, 3,4-Tetrahydropyrimidin-5-Yl]Oxalamic Acid Derivatives as Inhibitors of Lumazine Syntase and Riboflavin Synthase: Design, Synthesis, Biochemical Evaluation, Crystallography and Mechanistic Implications.
J.Org.Chem., 73, 2008
5X5F
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BU of 5x5f by Molmil
Prefusion structure of MERS-CoV spike glycoprotein, conformation 2
Descriptor: S protein
Authors:Yuan, Y, Cao, D, Zhang, Y, Ma, J, Qi, J, Wang, Q, Lu, G, Wu, Y, Yan, J, Shi, Y, Zhang, X, Gao, G.F.
Deposit date:2017-02-15
Release date:2017-05-03
Last modified:2017-05-24
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Cryo-EM structures of MERS-CoV and SARS-CoV spike glycoproteins reveal the dynamic receptor binding domains
Nat Commun, 8, 2017
5XKX
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BU of 5xkx by Molmil
Crystal structure of WT DddY
Descriptor: ACETATE ION, Uncharacterized protein, ZINC ION
Authors:Li, C.Y, Zhang, Y.Z.
Deposit date:2017-05-10
Release date:2017-11-01
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Mechanistic Insights into Dimethylsulfoniopropionate Lyase DddY, a New Member of the Cupin Superfamily.
J. Mol. Biol., 429, 2017
8J6P
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BU of 8j6p by Molmil
Cryo-EM structure of the MK-6892-bound human HCAR2-Gi1 complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 7-methyl-N-[(2R)-1-phenoxypropan-2-yl]-3-(4-propan-2-ylphenyl)pyrazolo[1,5-a]pyrimidine-6-carboxamide, CHOLESTEROL, ...
Authors:Mao, C, Gao, M, Zang, S, Zhu, Y, Ma, X, Zhang, Y.
Deposit date:2023-04-26
Release date:2023-12-06
Method:ELECTRON MICROSCOPY (2.55 Å)
Cite:Orthosteric and allosteric modulation of human HCAR2 signaling complex.
Nat Commun, 14, 2023
8J6R
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BU of 8j6r by Molmil
Cryo-EM structure of the MK-6892-bound human HCAR2-Gi1 complex
Descriptor: 2-[[2,2-dimethyl-3-[3-(5-oxidanylpyridin-2-yl)-1,2,4-oxadiazol-5-yl]propanoyl]amino]cyclohexene-1-carboxylic acid, 2-acetamido-2-deoxy-beta-D-glucopyranose, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
Authors:Mao, C, Gao, M, Zang, S, Zhu, Y, Ma, X, Zhang, Y.
Deposit date:2023-04-26
Release date:2023-12-06
Method:ELECTRON MICROSCOPY (2.76 Å)
Cite:Orthosteric and allosteric modulation of human HCAR2 signaling complex.
Nat Commun, 14, 2023
8J6Q
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BU of 8j6q by Molmil
Cryo-EM structure of the 3-HB and compound 9n-bound human HCAR2-Gi1 complex
Descriptor: (3R)-3-hydroxybutanoic acid, 2-acetamido-2-deoxy-beta-D-glucopyranose, 7-methyl-N-[(2R)-1-phenoxypropan-2-yl]-3-(4-propan-2-ylphenyl)pyrazolo[1,5-a]pyrimidine-6-carboxamide, ...
Authors:Mao, C, Gao, M, Zang, S, Zhu, Y, Ma, X, Zhang, Y.
Deposit date:2023-04-26
Release date:2023-12-06
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:Orthosteric and allosteric modulation of human HCAR2 signaling complex.
Nat Commun, 14, 2023
8JCH
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BU of 8jch by Molmil
Cryo-EM structure of yeast Rat1-bound Pol II pre-termination transcription complex 1 (Pol II Rat1-PTTC1)
Descriptor: 5'-3' exoribonuclease 2, DNA (38-MER), DNA-directed RNA polymerase II subunit RPB1, ...
Authors:Zeng, Y, Zhang, Y.
Deposit date:2023-05-11
Release date:2024-01-31
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Structural basis of exoribonuclease-mediated mRNA transcription termination.
Nature, 628, 2024
3V5J
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BU of 3v5j by Molmil
Crystal Structure of Interleukin-2 Inducible T-cell Kinase Itk Catalytic Domain with Thienopyrazolylindole Inhibitor 090
Descriptor: 3-[4-(2-morpholin-4-ylethoxy)-2-(1~{H}-thieno[3,2-c]pyrazol-3-yl)-1~{H}-indol-6-yl]pentan-3-ol, SULFATE ION, Tyrosine-protein kinase ITK/TSK
Authors:McLean, L.R, Zhang, Y.
Deposit date:2011-12-16
Release date:2012-05-02
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.59 Å)
Cite:X-ray crystallographic structure-based design of selective thienopyrazole inhibitors for interleukin-2-inducible tyrosine kinase.
Bioorg.Med.Chem.Lett., 22, 2012
5Z9Y
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BU of 5z9y by Molmil
Crystal structure of Mycobacterium tuberculosis thiazole synthase (ThiG) complexed with DXP
Descriptor: 1-DEOXY-D-XYLULOSE-5-PHOSPHATE, Thiazole synthase
Authors:Zhang, J, Zhang, B, Zhao, Y, Yang, X, Huang, M, Cui, P, Zhang, W, Li, J, Zhang, Y.
Deposit date:2018-02-05
Release date:2018-04-11
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Snapshots of catalysis: Structure of covalently bound substrate trapped in Mycobacterium tuberculosis thiazole synthase (ThiG).
Biochem. Biophys. Res. Commun., 497, 2018
8TWP
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BU of 8twp by Molmil
Influenza A virus (A/Aichi/2/1968(H3N2) nucleoprotein mutant - 2-7 deleted, R416A
Descriptor: Nucleoprotein
Authors:Yoon, J, Zhang, Y.M, Grant, R.A, Shoulders, M.D.
Deposit date:2023-08-21
Release date:2024-07-03
Last modified:2024-07-10
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:The immune-evasive proline-283 substitution in influenza nucleoprotein increases aggregation propensity without altering the native structure.
Sci Adv, 10, 2024
4EAC
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BU of 4eac by Molmil
Crystal structure of mannonate dehydratase from Escherichia coli strain K12
Descriptor: CHLORIDE ION, MANGANESE (II) ION, Mannonate dehydratase
Authors:Qiu, X, Zhu, Y, Yuan, Y, Zhang, Y, Liu, H, Gao, Y, Teng, M, Niu, L.
Deposit date:2012-03-22
Release date:2013-03-27
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural insights into decreased enzymatic activity induced by an insert sequence in mannonate dehydratase from Gram negative bacterium.
J.Struct.Biol., 180, 2012
5V12
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BU of 5v12 by Molmil
Crystal structure of Carbon Sulfoxide lyase, Egt2 Y134F with sulfenic acid intermediate
Descriptor: (1S)-1-carboxy-2-[2-(hydroxysulfanyl)-1H-imidazol-4-yl]-N,N,N-trimethylethan-1-aminium, FORMIC ACID, Hercynylcysteine sulfoxide lyase
Authors:Irani, S, Zhang, Y.
Deposit date:2017-03-01
Release date:2018-03-07
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.451 Å)
Cite:Snapshots of C-S Cleavage in Egt2 Reveals Substrate Specificity and Reaction Mechanism.
Cell Chem Biol, 25, 2018
6K3Z
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BU of 6k3z by Molmil
Crystal structure of dCas9 in complex with sgRNA and DNA (TGA PAM)
Descriptor: CRISPR-associated endonuclease Cas9, DNA (28-MER), DNA (5'-D(*AP*AP*AP*TP*GP*AP*TP*AP*TP*TP*G)-3'), ...
Authors:Chen, W, Zhang, H, Zhang, Y, Wang, Y, Gan, J, Ji, Q.
Deposit date:2019-05-22
Release date:2019-09-25
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Molecular basis for the PAM expansion and fidelity enhancement of an evolved Cas9 nuclease.
Plos Biol., 17, 2019
6K4P
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BU of 6k4p by Molmil
Crystal structure of xCas9 in complex with sgRNA and DNA (TGG PAM)
Descriptor: CRISPR-associated endonuclease Cas9/Csn1, DNA (28-MER), PHOSPHATE ION, ...
Authors:Chen, W, Zhang, H, Zhang, Y, Wang, Y, Gan, J, Ji, Q.
Deposit date:2019-05-25
Release date:2019-09-25
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Molecular basis for the PAM expansion and fidelity enhancement of an evolved Cas9 nuclease.
Plos Biol., 17, 2019
5ZIU
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BU of 5ziu by Molmil
Crystal structure of human Entervirus D68 RdRp
Descriptor: DI(HYDROXYETHYL)ETHER, GLYCEROL, RdRp
Authors:Wang, M.L, Zhang, Y, Chen, Y.P, Lu, D.R, Jiang, H, Chen, Y.J, Li, L, Zhang, C.H, Shi, Q.L, Su, D.
Deposit date:2018-03-17
Release date:2019-04-17
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.147 Å)
Cite:Crystal structure of human Entervirus D68 RdRp in complex with NADPH
To Be Published
6ITA
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BU of 6ita by Molmil
Crystal structure of intracellular B30.2 domain of BTN3A1 mutant
Descriptor: Butyrophilin subfamily 3 member A1
Authors:Yang, Y.Y, Liu, W.D, Cai, N.N, Chen, C.C, Guo, R.T, Zhang, Y.H.
Deposit date:2018-11-20
Release date:2019-04-03
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:A Structural Change in Butyrophilin upon Phosphoantigen Binding Underlies Phosphoantigen-Mediated V gamma 9V delta 2 T Cell Activation.
Immunity, 50, 2019
6K4U
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BU of 6k4u by Molmil
Crystal structure of xCas9 in complex with sgRNA and DNA (TGA PAM)
Descriptor: CRISPR-associated endonuclease Cas9, non-target DNA, sgRNA, ...
Authors:Chen, W, Zhang, H, Zhang, Y, Wang, Y, Gan, J, Ji, Q.
Deposit date:2019-05-27
Release date:2019-09-25
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Molecular basis for the PAM expansion and fidelity enhancement of an evolved Cas9 nuclease.
Plos Biol., 17, 2019
1Q7B
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BU of 1q7b by Molmil
The structure of betaketoacyl-[ACP] reductase from E. coli in complex with NADP+
Descriptor: 3-oxoacyl-[acyl-carrier protein] reductase, CALCIUM ION, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Price, A.C, Zhang, Y.-M, Rock, C.O, White, S.M.
Deposit date:2003-08-17
Release date:2004-02-17
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Cofactor-Induced Conformational Rearrangements Establish a Catalytically Competent Active Site and a Proton Relay Conduit in FabG
Structure, 12, 2004
6K4S
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BU of 6k4s by Molmil
Crystal structure of xCas9 in complex with sgRNA and DNA (TGC PAM)
Descriptor: CRISPR-associated endonuclease Cas9/Csn1, non-targeted DNA, sgRNA, ...
Authors:Chen, W, Zhang, H, Zhang, Y, Wang, Y, Gan, J, Ji, Q.
Deposit date:2019-05-26
Release date:2019-09-25
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.01 Å)
Cite:Molecular basis for the PAM expansion and fidelity enhancement of an evolved Cas9 nuclease.
Plos Biol., 17, 2019
1NYP
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BU of 1nyp by Molmil
4th LIM domain of PINCH protein
Descriptor: PINCH protein, ZINC ION
Authors:Velyvis, A, Vaynberg, J, Vinogradova, O, Zhang, Y, Wu, C, Qin, J.
Deposit date:2003-02-13
Release date:2003-07-01
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structural and functional insights into PINCH LIM4 domain-mediated integrin signaling
Nat.Struct.Biol., 10, 2003
4ESP
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BU of 4esp by Molmil
Crystal Structure of Peanut Allergen Ara h 5
Descriptor: 1,2-ETHANEDIOL, ISOPROPYL ALCOHOL, Profilin
Authors:Wang, Y, Zhang, Y.Z.
Deposit date:2012-04-23
Release date:2013-03-06
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Crystal Structure of Peanut ( Arachis hypogaea ) Allergen Ara h 5.
J.Agric.Food Chem., 61, 2013
4F6V
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BU of 4f6v by Molmil
Crystal structure of dehydrosqualene synthase (crtm) from s. aureus complexed with bph-1034, mg2+ and fmp.
Descriptor: (2E,6Z)-3,7,11-trimethyldodeca-2,6,10-trien-1-yl dihydrogen phosphate, 2,4-dioxo-4-{[3-(3-phenoxyphenyl)propyl]amino}butanoic acid, Dehydrosqualene synthase, ...
Authors:Lin, F.-Y, Zhang, Y, Liu, Y.-L, Oldfield, E.
Deposit date:2012-05-15
Release date:2012-06-13
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:HIV-1 Integrase Inhibitor-Inspired Antibacterials Targeting Isoprenoid Biosynthesis.
ACS Med Chem Lett, 3, 2012
4F6X
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BU of 4f6x by Molmil
Crystal structure of dehydrosqualene synthase (crtm) from s. aureus complexed with bph-1112
Descriptor: 1-[3-(hexyloxy)benzyl]-4-hydroxy-2-oxo-1,2-dihydropyridine-3-carboxylic acid, D(-)-TARTARIC ACID, Dehydrosqualene synthase, ...
Authors:Lin, F.-Y, Zhang, Y, Liu, Y.-L, Oldfield, E.
Deposit date:2012-05-15
Release date:2012-06-20
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:HIV-1 Integrase Inhibitor-Inspired Antibacterials Targeting Isoprenoid Biosynthesis.
ACS Med Chem Lett, 3, 2012

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