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PDB: 809 results

4C7A
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BU of 4c7a by Molmil
Crystal structure of the Smoothened CRD, selenomethionine-labeled
Descriptor: SMOOTHENED, SODIUM ION, ZINC ION
Authors:Nachtergaele, S, Whalen, D.M, Mydock, L.K, Zhao, Z, Malinauskas, T, Krishnan, K, Ingham, P.W, Covey, D.F, Rohatgi, R, Siebold, C.
Deposit date:2013-09-20
Release date:2013-11-06
Last modified:2013-11-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure and Function of the Smoothened Extracellular Domain in Vertebrate Hedgehog Signaling
Elife, 2, 2013
4C79
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Crystal structure of the Smoothened CRD, native
Descriptor: SMOOTHENED, SODIUM ION, ZINC ION
Authors:Nachtergaele, S, Whalen, D.M, Mydock, L.K, Zhao, Z, Malinauskas, T, Krishnan, K, Ingham, P.W, Covey, D.F, Rohatgi, R, Siebold, C.
Deposit date:2013-09-20
Release date:2013-11-06
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.604 Å)
Cite:Structure and Function of the Smoothened Extracellular Domain in Vertebrate Hedgehog Signaling
Elife, 2, 2013
7Y4F
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BU of 7y4f by Molmil
bacterial DPP4
Descriptor: Dipeptidyl peptidase IV
Authors:Hang, J, Jiang, C, Wang, K, Zhang, Z, Guo, F, Liu, J, Wang, G, Lei, X, Gonzalez, F, Qiao, J.
Deposit date:2022-06-14
Release date:2023-06-14
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.918 Å)
Cite:Microbial-host-isozyme analyses reveal microbial DPP4 as a potential antidiabetic target.
Science, 381, 2023
8H7F
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BU of 8h7f by Molmil
The crystal structure of human abl1 kinase domain in complex with abl1-B-EBA
Descriptor: 1-[6-(6-methoxyisoquinolin-7-yl)-1,3-benzothiazol-2-yl]-3-(2-oxidanylideneethyl)urea, Tyrosine-protein kinase ABL1
Authors:Zhu, C.J, Zhang, Z.M.
Deposit date:2022-10-20
Release date:2023-03-01
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.45013428 Å)
Cite:2-Ethynylbenzaldehyde-Based, Lysine-Targeting Irreversible Covalent Inhibitors for Protein Kinases and Nonkinases.
J.Am.Chem.Soc., 2023
8H7H
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BU of 8h7h by Molmil
The crystal structure of human abl1 kinase domain in complex with abl1-A-EBA
Descriptor: 5-[3-(6-methoxyisoquinolin-7-yl)-1H-pyrrolo[2,3-b]pyridin-5-yl]-N-methyl-N-prop-2-ynyl-pyridine-3-carboxamide, Tyrosine-protein kinase ABL1
Authors:Zhu, C.J, Zhang, Z.M.
Deposit date:2022-10-20
Release date:2023-03-22
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.27789712 Å)
Cite:2-Ethynylbenzaldehyde-Based, Lysine-Targeting Irreversible Covalent Inhibitors for Protein Kinases and Nonkinases.
J.Am.Chem.Soc., 2023
8EMR
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BU of 8emr by Molmil
Cryo-EM structure of human liver glucosidase II
Descriptor: CALCIUM ION, Glucosidase 2 subunit beta, Neutral alpha-glucosidase AB, ...
Authors:Su, C, Lyu, M, Zhang, Z, Yu, E.W.
Deposit date:2022-09-28
Release date:2023-05-10
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (2.92 Å)
Cite:High-resolution structural-omics of human liver enzymes.
Cell Rep, 42, 2023
8EMT
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BU of 8emt by Molmil
Cryo-EM analysis of the human aldehyde oxidase from liver
Descriptor: Aldehyde oxidase, DIOXOTHIOMOLYBDENUM(VI) ION, FE2/S2 (INORGANIC) CLUSTER, ...
Authors:Su, C, Lyu, M, Zhang, Z, Yu, E.W.
Deposit date:2022-09-28
Release date:2023-05-10
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (2.92 Å)
Cite:High-resolution structural-omics of human liver enzymes.
Cell Rep, 42, 2023
8EMS
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BU of 8ems by Molmil
Cryo-EM structure of human liver glycogen phosphorylase
Descriptor: Glycogen phosphorylase, liver form, PYRIDOXAL-5'-PHOSPHATE
Authors:Su, C, Lyu, M, Zhang, Z, Yu, E.W.
Deposit date:2022-09-28
Release date:2023-05-10
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (2.65 Å)
Cite:High-resolution structural-omics of human liver enzymes.
Cell Rep, 42, 2023
5G04
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BU of 5g04 by Molmil
Structure of the human APC-Cdc20-Hsl1 complex
Descriptor: ANAPHASE-PROMOTING COMPLEX SUBUNIT 1, ANAPHASE-PROMOTING COMPLEX SUBUNIT 10, ANAPHASE-PROMOTING COMPLEX SUBUNIT 11, ...
Authors:Zhang, S, Chang, L, Alfieri, C, Zhang, Z, Yang, J, Maslen, S, Skehel, M, Barford, D.
Deposit date:2016-03-16
Release date:2016-05-25
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Molecular Mechanism of Apc/C Activation by Mitotic Phosphorylation.
Nature, 533, 2016
5EJO
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BU of 5ejo by Molmil
Crystal structure of the winged helix domain in Chromatin assembly factor 1 subunit p90
Descriptor: Chromatin assembly factor 1 subunit p90
Authors:Zhang, K, Gao, Y, Li, J, Burgess, R, Han, J, Liang, H, Zhang, Z, Liu, Y.
Deposit date:2015-11-02
Release date:2016-03-16
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:A DNA binding winged helix domain in CAF-1 functions with PCNA to stabilize CAF-1 at replication forks
Nucleic Acids Res., 44, 2016
8HPA
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BU of 8hpa by Molmil
Monkeypox virus DNA replication holoenzyme F8, A22 and E4 complex in a DNA binding form
Descriptor: DNA (5'-D(*CP*GP*AP*TP*CP*CP*TP*TP*CP*CP*CP*CP*TP*AP*C)-3'), DNA (5'-D(P*AP*TP*GP*GP*TP*AP*GP*GP*GP*GP*AP*AP*GP*GP*AP*TP*CP*G)-3'), DNA polymerase, ...
Authors:Xu, Y, Wu, Y, Zhang, Y, Fan, R, Yang, Y, Li, D, Yang, B, Zhang, Z, Dong, C.
Deposit date:2022-12-12
Release date:2024-01-31
Method:ELECTRON MICROSCOPY (3.01 Å)
Cite:Structure of DNA replication machinery from human monkeypox virus
To Be Published
5GPI
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BU of 5gpi by Molmil
Crystal Structures of Unlinked NS2B-NS3 Protease from Zika Virus and Its Complex with a Reverse Peptide Inhibitor
Descriptor: NS2B cofactor, NS3 protease
Authors:Phoo, W.W, Zhang, Z.Z.
Deposit date:2016-08-02
Release date:2016-12-14
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.578 Å)
Cite:Crystal structure of unlinked NS2B-NS3 protease from Zika virus
Science, 354, 2016
8OW1
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BU of 8ow1 by Molmil
Cryo-EM structure of the yeast Inner kinetochore bound to a CENP-A nucleosome.
Descriptor: C0N3, Centromere DNA-binding protein complex CBF3 subunit B, Centromere DNA-binding protein complex CBF3 subunit C, ...
Authors:Dendooven, T.D, Zhang, Z, Yang, J, McLaughlin, S, Schwabb, J, Scheres, S, Yatskevich, S, Barford, D.
Deposit date:2023-04-26
Release date:2023-08-09
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Cryo-EM structure of the complete inner kinetochore of the budding yeast point centromere.
Sci Adv, 9, 2023
5G05
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BU of 5g05 by Molmil
Cryo-EM structure of combined apo phosphorylated APC
Descriptor: ANAPHASE-PROMOTING COMPLEX SUBUNIT 1, ANAPHASE-PROMOTING COMPLEX SUBUNIT 10, ANAPHASE-PROMOTING COMPLEX SUBUNIT 11, ...
Authors:Zhang, S, Chang, L, Alfieri, C, Zhang, Z, Yang, J, Maslen, S, Skehel, M, Barford, D.
Deposit date:2016-03-16
Release date:2016-05-25
Last modified:2019-09-11
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Molecular Mechanism of Apc/C Activation by Mitotic Phosphorylation.
Nature, 533, 2016
2B3O
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BU of 2b3o by Molmil
Crystal structure of human tyrosine phosphatase SHP-1
Descriptor: Tyrosine-protein phosphatase, non-receptor type 6
Authors:Yang, J, Liu, L, He, D, Song, X, Liang, X, Zhao, Z.J, Zhou, G.W.
Deposit date:2005-09-20
Release date:2005-10-25
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of human protein-tyrosine phosphatase SHP-1.
J.Biol.Chem., 278, 2003
5H6G
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BU of 5h6g by Molmil
Crystal structure of a thermostable lipase from Marine Streptomyces
Descriptor: CHLORIDE ION, GLYCEROL, PHOSPHATE ION, ...
Authors:Hou, S, Zhao, Z, Liu, J.
Deposit date:2016-11-11
Release date:2017-09-20
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.34 Å)
Cite:Crystal structure of a lipase from Streptomyces sp. strain W007 - implications for thermostability and regiospecificity
FEBS J., 284, 2017
3OMH
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BU of 3omh by Molmil
Crystal structure of PTPN22 in complex with SKAP-HOM pTyr75 peptide
Descriptor: Src kinase-associated phosphoprotein 2, Tyrosine-protein phosphatase non-receptor type 22
Authors:Yu, X, Sun, J.-P, Zhang, S, Zhang, Z.-Y.
Deposit date:2010-08-26
Release date:2011-06-29
Last modified:2011-09-14
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Substrate Specificity of Lymphoid-specific Tyrosine Phosphatase (Lyp) and Identification of Src Kinase-associated Protein of 55 kDa Homolog (SKAP-HOM) as a Lyp Substrate.
J.Biol.Chem., 286, 2011
4A82
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BU of 4a82 by Molmil
Fitted model of staphylococcus aureus sav1866 model ABC transporter in the human cystic fibrosis transmembrane conductance regulator volume map EMD-1966.
Descriptor: CYSTIC FIBROSIS TRANSMEMBRANE CONDUCTANCE REGULATOR
Authors:Rosenberg, M.F, ORyan, L.P, Hughes, G, Zhao, Z, Aleksandrov, L.A, Riordan, J.R, Ford, R.C.
Deposit date:2011-11-18
Release date:2012-01-11
Last modified:2024-05-08
Method:ELECTRON CRYSTALLOGRAPHY (9 Å)
Cite:The Cystic Fibrosis Transmembrane Conductance Regulator (Cftr):3D Structure and Localisation of a Channel Gate.
J.Biol.Chem., 286, 2011
1FPR
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BU of 1fpr by Molmil
CRYSTAL STRUCTURE OF THE COMPLEX FORMED BETWEEN THE CATALYTIC DOMAIN OF SHP-1 AND AN IN VITRO PEPTIDE SUBSTRATE PY469 DERIVED FROM SHPS-1.
Descriptor: PEPTIDE PY469, PROTEIN-TYROSINE PHOSPHATASE 1C
Authors:Yang, J, Cheng, Z, Niu, Z, Zhao, Z.J, Zhou, G.W.
Deposit date:2000-08-31
Release date:2001-03-07
Last modified:2021-11-03
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural basis for substrate specificity of protein-tyrosine phosphatase SHP-1.
J.Biol.Chem., 275, 2000
6IQD
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BU of 6iqd by Molmil
Crystal structure of Alcohol dehydrogenase from Geobacillus stearothermophilus
Descriptor: Alcohol dehydrogenase, ZINC ION
Authors:Xue, S, Feng, Y, Guo, X, Zhao, Z.
Deposit date:2018-11-07
Release date:2019-06-05
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.84 Å)
Cite:Characterization of the substrate scope of an alcohol dehydrogenase commonly used as methanol dehydrogenase.
Bioorg.Med.Chem.Lett., 29, 2019
3BLT
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BU of 3blt by Molmil
Crystal structures of YopH complexed with PVSN and PVS, inhibitors of YopH which co-valent bind to Cys of active site
Descriptor: Tyrosine-protein phosphatase yopH, phenyl ethenesulfonate
Authors:Liu, S, Zhang, Z.-Y.
Deposit date:2007-12-11
Release date:2009-02-10
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Aryl vinyl sulfonates and sulfones as active site-directed and mechanism-based probes for protein tyrosine phosphatases.
J.Am.Chem.Soc., 130, 2008
6IWK
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BU of 6iwk by Molmil
The Structure of Maltooligosaccharide-forming Amylase from Pseudomonas saccharophila STB07
Descriptor: CALCIUM ION, GLYCEROL, Glucan 1,4-alpha-maltotetraohydrolase
Authors:Li, Z.F, Ban, X.F, Zhang, Z.Q, Li, C.M, Gu, Z.B, Jin, T.C, Li, Y.L, Shang, Y.H.
Deposit date:2018-12-05
Release date:2019-12-11
Last modified:2021-03-31
Method:X-RAY DIFFRACTION (1.501 Å)
Cite:Structure of maltotetraose-forming amylase from Pseudomonas saccharophila STB07 provides insights into its product specificity.
Int.J.Biol.Macromol., 154, 2020
2FF0
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BU of 2ff0 by Molmil
Solution Structure of Steroidogenic Factor 1 DNA Binding Domain Bound to its Target Sequence in the Inhibin alpha-subunit Promoter
Descriptor: CTGTGGCCCTGAGCC, GGCTCAGGGCCACAG, Steroidogenic factor 1, ...
Authors:Little, T.H, Zhang, Y, Matulis, C.K, Weck, J, Zhang, Z, Ramachandran, A, Mayo, K.E, Radhakrishnan, I.
Deposit date:2005-12-17
Release date:2006-04-11
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Sequence-specific deoxyribonucleic Acid (DNA) recognition by steroidogenic factor 1: a helix at the carboxy terminus of the DNA binding domain is necessary for complex stability.
Mol.Endocrinol., 20, 2006
8J8G
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BU of 8j8g by Molmil
Monkeypox virus DNA replication holoenzyme F8, A22 and E4 in complex with a DNA duplex and cidofovir diphosphate
Descriptor: CALCIUM ION, DNA (5'-D(P*AP*GP*CP*TP*GP*CP*TP*AP*TP*GP*AP*GP*AP*TP*TP*AP*AP*GP*TP*TP*AP*T)-3'), DNA (5'-D(P*GP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*GP*AP*TP*AP*AP*CP*TP*TP*AP*AP*TP*CP*TP*CP*AP*CP*AP*TP*AP*GP*CP*AP*GP*CP*T)-3'), ...
Authors:Xu, Y, Wu, Y, Wu, X, Zhang, Y, Yang, Y, Li, D, Yang, B, Gao, K, Zhang, Z, Dong, C.
Deposit date:2023-05-01
Release date:2024-05-08
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (2.79 Å)
Cite:Structural basis of human mpox viral DNA replication inhibition by brincidofovir and cidofovir.
Int.J.Biol.Macromol., 270, 2024
4XBS
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BU of 4xbs by Molmil
2-deoxyribose-5-phosphate aldolase mutant - E78K
Descriptor: Deoxyribose-phosphate aldolase
Authors:Jiao, X.-C, Pan, J, Xu, G.-C, Kong, X.-D, Chen, Q, Zhang, Z.-J, Xu, J.-H.
Deposit date:2014-12-17
Release date:2015-11-04
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.17 Å)
Cite:Efficient synthesis of a statin precursor in high space-time yield by a new aldehyde-tolerant aldolase identified from Lactobacillus brevis
Catalysis Science And Technology, 5, 2015

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