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PDB: 34568 results

2MP0
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BU of 2mp0 by Molmil
Protein Phosphorylation upon a Fleeting Encounter
Descriptor: Glucose-specific phosphotransferase enzyme IIA component, PHOSPHITE ION, Phosphoenolpyruvate-protein phosphotransferase
Authors:Xing, Q, Yang, J, Huang, P, Zhang, W, Tang, C.
Deposit date:2014-05-08
Release date:2014-08-20
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Visualizing an ultra-weak protein-protein interaction in phosphorylation signaling.
Angew.Chem.Int.Ed.Engl., 53, 2014
6V2D
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BU of 6v2d by Molmil
Crystal Structure of chromodomain of CDYL2 in complex with inhibitor UNC3866
Descriptor: Chromodomain Y-like protein 2, UNC3866, UNKNOWN ATOM OR ION
Authors:Liu, Y, Tempel, W, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
Deposit date:2019-11-22
Release date:2019-12-25
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural Basis for the Binding Selectivity of Human CDY Chromodomains.
Cell Chem Biol, 27, 2020
3MDZ
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BU of 3mdz by Molmil
Crystal Structure of Human Carbonic Anhydrase VII [isoform 1], CA7
Descriptor: 6-ethoxy-1,3-benzothiazole-2-sulfonamide, Carbonic anhydrase 7, GLYCEROL, ...
Authors:Ugochukwu, E, Shafqat, N, Pilka, E, Chaikuad, A, Krojer, T, Muniz, J, Kim, J, Bray, J, Bountra, C, Arrowsmith, C.H, Weigelt, J, Edwards, A, von Delft, F, Carpenter, E.P, Yue, W.W, Oppermann, U, Structural Genomics Consortium (SGC)
Deposit date:2010-03-31
Release date:2010-06-23
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.32 Å)
Cite:Crystal Structure of Human Carbonic Anhydrase VII [isoform 1], CA7
to be published
8Q3R
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BU of 8q3r by Molmil
Cryo-EM structure of the DNA polymerase holoenzyme E9-A20-D4 of vaccinia virus
Descriptor: DNA polymerase, DNA polymerase processivity factor component OPG148, Uracil-DNA glycosylase
Authors:Burmeister, W.P, Ballandras-Colas, A, Boettcher, B, Grimm, C.
Deposit date:2023-08-04
Release date:2024-05-08
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structure and flexibility of the DNA polymerase holoenzyme of vaccinia virus.
Plos Pathog., 20, 2024
6OZG
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BU of 6ozg by Molmil
Crystal structure of Thermotoga maritima (Tm) Endonuclease V (E89Q) in complex with a 12mer DNA containing an inosine followed by a ribo-adenosine
Descriptor: 1,2-ETHANEDIOL, DNA/RNA (5'-D(*AP*AP*TP*GP*A)-R(P*A)-D(P*GP*AP*T)-R(P*NP*N)-D(P*T)-3'), Endonuclease V, ...
Authors:Samara, N.L, Yang, W.
Deposit date:2019-05-15
Release date:2019-09-04
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Evolution of Inosine-Specific Endonuclease V from Bacterial DNase to Eukaryotic RNase.
Mol.Cell, 76, 2019
8PK2
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BU of 8pk2 by Molmil
Cryo EM structure of the type 1m polymorph of alpha-synuclein
Descriptor: Alpha-synuclein
Authors:Frey, L, Qureshi, B.M, Kwiatkowski, W, Rhyner, D, Greenwald, J, Riek, R.
Deposit date:2023-06-24
Release date:2024-05-29
Method:ELECTRON MICROSCOPY (3.26 Å)
Cite:On the pH-dependence of alpha-synuclein amyloid polymorphism and the role of secondary nucleation in seed-based amyloid propagation
Elife, 2023
7FDZ
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BU of 7fdz by Molmil
Levansucrase from Brenneria sp. EniD 312 with sucrose
Descriptor: 3,6,9,12,15,18,21-HEPTAOXATRICOSANE-1,23-DIOL, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Xu, W, Hou, X.D, Rao, Y.J, Pijning, T, Guskov, A, Mu, W.M.
Deposit date:2021-07-19
Release date:2022-04-20
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Crystal Structure of Levansucrase from the Gram-Negative Bacterium Brenneria Provides Insights into Its Product Size Specificity.
J.Agric.Food Chem., 70, 2022
6V6Z
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BU of 6v6z by Molmil
Crystal structure of N-[(4-methoxyphenyl)sulfonyl]-N-(4-{[(4-methoxyphenyl)sulfonyl]amino}naphthalen-1-yl)glycine bound to human Keap1 Kelch domain
Descriptor: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, DITHIANE DIOL, FORMIC ACID, ...
Authors:Lazzara, P.R, David, B.P, Ankireddy, A, Richardson, B.G, Dye, K, Ratia, K.M, Reddy, S.P, Moore, T.W.
Deposit date:2019-12-06
Release date:2020-04-29
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Synthesis and Evaluation of Noncovalent Naphthalene-Based KEAP1-NRF2 Inhibitors.
Acs Med.Chem.Lett., 11, 2020
8PIX
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BU of 8pix by Molmil
Cryo EM structure of the type 3C polymorph of alpha-synuclein at low pH.
Descriptor: Alpha-synuclein
Authors:Frey, L, Qureshi, B.M, Kwiatkowski, W, Rhyner, D, Greenwald, J, Riek, R.
Deposit date:2023-06-22
Release date:2024-05-29
Method:ELECTRON MICROSCOPY (3.41 Å)
Cite:On the pH-dependence of alpha-synuclein amyloid polymorphism and the role of secondary nucleation in seed-based amyloid propagation
Elife, 2023
6F85
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BU of 6f85 by Molmil
Crystal structure of cytochrome P450 CYP260A1 (S276N) bound with histidine
Descriptor: Cytochrome P450 CYP260A1, HISTIDINE, PROTOPORPHYRIN IX CONTAINING FE
Authors:Jozwik, I.K, Thunnissen, A.M.W.H.
Deposit date:2017-12-12
Release date:2018-03-14
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structure-Based Engineering of Steroidogenic CYP260A1 for Stereo- and Regioselective Hydroxylation of Progesterone.
ACS Chem. Biol., 13, 2018
8D1H
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BU of 8d1h by Molmil
hBest2 Ca2+-unbound closed state
Descriptor: 1,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLINE, 2-[2-[(1~{S},2~{S},4~{S},5'~{R},6~{R},7~{S},8~{R},9~{S},12~{S},13~{R},16~{S})-5',7,9,13-tetramethylspiro[5-oxapentacyclo[10.8.0.0^{2,9}.0^{4,8}.0^{13,18}]icos-18-ene-6,2'-oxane]-16-yl]oxyethyl]propane-1,3-diol, Bestrophin-2, ...
Authors:Owji, A.P, Kittredge, A, Hendrickson, W.A, Tingting, Y.
Deposit date:2022-05-27
Release date:2022-07-13
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (1.94 Å)
Cite:Structures and gating mechanisms of human bestrophin anion channels.
Nat Commun, 13, 2022
8PK4
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BU of 8pk4 by Molmil
Cryo EM structure of the type 5A polymorph of alpha-synuclein.
Descriptor: Alpha-synuclein
Authors:Frey, L, Qureshi, B.M, Kwiatkowski, W, Rhyner, D, Greenwald, J, Riek, R.
Deposit date:2023-06-24
Release date:2024-05-29
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:On the pH-dependence of alpha-synuclein amyloid polymorphism and the role of secondary nucleation in seed-based amyloid propagation
Elife, 2023
4IIU
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BU of 4iiu by Molmil
Crystal structure of a putative 3-oxoacyl-[acyl-carrier protein]reductase from Escherichia coli strain CFT073 complexed with NADP+ at 2.1 A resolution
Descriptor: 3-oxoacyl-[acyl-carrier protein] reductase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Hou, J, Osinski, T, Zheng, H, Shumilin, I, Shabalin, I, Shatsman, S, Anderson, W.F, Minor, W, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2012-12-20
Release date:2013-01-09
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of a putative 3-oxoacyl-[acyl-carrier protein]reductase from Escherichia coli strain CFT073 complexed with NADP+ at 2.1 A resolution
To be Published
5T40
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BU of 5t40 by Molmil
A Novel domain in human EXOG converts apoptotic endonuclease to DNA-repair enzyme
Descriptor: MAGNESIUM ION, Nuclease EXOG, mitochondrial, ...
Authors:Szymanski, M.R, Yin, W.Y.
Deposit date:2016-08-27
Release date:2017-05-17
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:A domain in human EXOG converts apoptotic endonuclease to DNA-repair exonuclease.
Nat Commun, 8, 2017
6VCF
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BU of 6vcf by Molmil
Crystal structure of Nitrosotalea devanaterra carotenoid cleavage dioxygenase, iron form
Descriptor: BICARBONATE ION, CHLORIDE ION, FE (II) ION, ...
Authors:Daruwalla, A, Shi, W, Kiser, P.D.
Deposit date:2019-12-20
Release date:2020-07-08
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.687 Å)
Cite:Structural basis for carotenoid cleavage by an archaeal carotenoid dioxygenase.
Proc.Natl.Acad.Sci.USA, 117, 2020
6V9T
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BU of 6v9t by Molmil
Tudor domain of TDRD3 in complex with a small molecule
Descriptor: 4-methyl-2,3,4,5,6,7-hexahydrodicyclopenta[b,e]pyridin-8(1H)-imine, Tudor domain-containing protein 3, UNKNOWN ATOM OR ION
Authors:Li, W, Tempel, W, Arrowsmith, C.H, Bountra, C, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
Deposit date:2019-12-16
Release date:2019-12-25
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.154 Å)
Cite:A small molecule antagonist of SMN disrupts the interaction between SMN and RNAP II.
Nat Commun, 13, 2022
5YQG
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BU of 5yqg by Molmil
The structure of 14-3-3 and pNumb peptide
Descriptor: 14-3-3 protein eta, Peptide from Protein numb homolog
Authors:Chen, X, Liu, Z, Wen, W.
Deposit date:2017-11-06
Release date:2018-02-07
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural determinants controlling 14-3-3 recruitment to the endocytic adaptor Numb and dissociation of the Numb/alpha-adaptin complex.
J. Biol. Chem., 293, 2018
5J4S
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BU of 5j4s by Molmil
alpha-chymotrypsin from bovine pancreas in complex with a modified Bowman-Birk inhibitor from soybean
Descriptor: Bowman-Birk type proteinase inhibitor, Chymotrypsinogen A
Authors:Johansson, E, Tornoee, C.W.
Deposit date:2016-04-01
Release date:2017-04-12
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.103 Å)
Cite:Divergent Protein Synthesis of Bowman-Birk Protease Inhibitors, their Hydrodynamic Behavior and Co-crystallization with alpha-Chymotrypsin
Synlett, 2017
5J5V
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BU of 5j5v by Molmil
CdiA-CT from uropathogenic Escherichia coli in complex with cognate immunity protein and CysK
Descriptor: Cysteine synthase A, Immunity protein CdiI, tRNA nuclease CdiA
Authors:Goulding, C.W, Johnson, P.M, Morse, R.P.
Deposit date:2016-04-04
Release date:2016-07-27
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Unraveling the essential role of CysK in CDI toxin activation.
Proc. Natl. Acad. Sci. U.S.A., 113, 2016
8DTW
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BU of 8dtw by Molmil
The crystal structure of I38T mutant PA endonuclease (2009/H1N1/CALIFORNIA) in complex with compound SJ001023036
Descriptor: 5-hydroxy-N-[2-(2-methoxypyridin-4-yl)ethyl]-6-oxo-2-{[2-(trifluoromethyl)phenyl]methyl}-1,6-dihydropyrimidine-4-carboxamide, Hexa Vinylpyrrolidone K15, MAGNESIUM ION, ...
Authors:Cuypers, M.G, Slavish, J.P, Rankovic, Z, White, S.W.
Deposit date:2022-07-26
Release date:2022-09-21
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.33 Å)
Cite:Chemical scaffold recycling: Structure-guided conversion of an HIV integrase inhibitor into a potent influenza virus RNA-dependent RNA polymerase inhibitor designed to minimize resistance potential.
Eur.J.Med.Chem., 247, 2023
3MDS
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BU of 3mds by Molmil
MAGANESE SUPEROXIDE DISMUTASE FROM THERMUS THERMOPHILUS
Descriptor: MANGANESE (III) ION, MANGANESE SUPEROXIDE DISMUTASE
Authors:Ludwig, M.L, Metzger, A.L, Pattridge, K.A, Stallings, W.C.
Deposit date:1993-10-20
Release date:1994-01-31
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Manganese superoxide dismutase from Thermus thermophilus. A structural model refined at 1.8 A resolution.
J.Mol.Biol., 219, 1991
8E4S
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BU of 8e4s by Molmil
The crystal structure of I38T mutant PA endonuclease (2009/H1N1/CALIFORNIA) in complex with compound SJ001023034
Descriptor: 5-hydroxy-6-oxo-N-[2-(pyridin-4-yl)ethyl]-2-{[2-(trifluoromethyl)phenyl]methyl}-3,6-dihydropyrimidine-4-carboxamide, Hexa Vinylpyrrolidone K15, MANGANESE (II) ION, ...
Authors:Cuypers, M.G, Slavish, J.P, Rankovic, Z, White, S.W.
Deposit date:2022-08-18
Release date:2022-09-21
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Chemical scaffold recycling: Structure-guided conversion of an HIV integrase inhibitor into a potent influenza virus RNA-dependent RNA polymerase inhibitor designed to minimize resistance potential.
Eur.J.Med.Chem., 247, 2023
5NRH
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BU of 5nrh by Molmil
Crystal structure of Burkholderia pseudomallei D-alanine-D-alanine ligase in complex with AMP
Descriptor: 1,2-ETHANEDIOL, ADENOSINE MONOPHOSPHATE, D-alanine--D-alanine ligase, ...
Authors:Diaz-Saez, L, Hunter, W.N.
Deposit date:2017-04-23
Release date:2018-05-30
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Burkholderia pseudomallei d-alanine-d-alanine ligase; detailed characterisation and assessment of a potential antibiotic drug target.
Febs J., 2019
7EXC
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BU of 7exc by Molmil
Crystal structure of T2R-TTL-1129A2 complex
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, GLYCEROL, ...
Authors:Yang, J.H, Yan, W.
Deposit date:2021-05-26
Release date:2022-06-01
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.39 Å)
Cite:Structure-Based Design and Synthesis of N-Substituted 3-Amino-beta-Carboline Derivatives as Potent alpha beta-Tubulin Degradation Agents
J.Med.Chem., 65, 2022
8DQS
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BU of 8dqs by Molmil
The crystal structure of wild type PA endonuclease (2009/H1N1/CALIFORNIA) in complex with compound SJ001023032
Descriptor: 5-hydroxy-N-[2-(2-methoxypyridin-4-yl)ethyl]-6-oxo-2-[4-(trifluoromethyl)phenyl]-3,6-dihydropyrimidine-4-carboxamide, Hexa Vinylpyrrolidone K15, MANGANESE (II) ION, ...
Authors:Cuypers, M.G, Slavish, J.P, Rankovic, Z, White, S.W.
Deposit date:2022-07-19
Release date:2022-09-14
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:The crystal structure of wild type PA endonuclease (2009/H1N1/CALIFORNIA) in complex with compound SJ001023032
To Be Published

224004

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