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PDB: 51964 件

6SMW
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A. thaliana serine hydroxymethyltransferase isoform 2 (AtSHMT2) in complex with pemetrexed
分子名称: 1,2-ETHANEDIOL, 2-{4-[2-(2-AMINO-4-OXO-4,7-DIHYDRO-3H-PYRROLO[2,3-D]PYRIMIDIN-5-YL)-ETHYL]-BENZOYLAMINO}-PENTANEDIOIC ACID, PYRIDOXAL-5'-PHOSPHATE, ...
著者Ruszkowski, M, Sekula, B, Dauter, Z.
登録日2019-08-23
公開日2020-01-08
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.54 Å)
主引用文献Structural basis of methotrexate and pemetrexed action on serine hydroxymethyltransferases revealed using plant models.
Sci Rep, 9, 2019
6JHJ
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Structure of Marine bacterial laminarinase mutant-E135A
分子名称: CALCIUM ION, LamCAT
著者Yang, J, Xu, Y, Miyakawa, T, Tanokura, M, Long, L.
登録日2019-02-18
公開日2019-04-03
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.69 Å)
主引用文献Molecular Basis for Substrate Recognition and Catalysis by a Marine Bacterial Laminarinase.
Appl.Environ.Microbiol., 86, 2020
1J3E
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Crystal Structure of the E.coli SeqA protein complexed with N6-methyladenine- guanine mismatch DNA
分子名称: 5'-D(*AP*AP*GP*GP*(6MA)P*TP*CP*CP*AP*A)-3', 5'-D(*TP*TP*GP*GP*AP*GP*CP*CP*TP*T)-3', SeqA protein
著者Fujikawa, N, Kurumizaka, H, Nureki, O, Tanaka, Y, Yamazoe, M, Hiraga, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2003-01-24
公開日2004-05-18
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural and biochemical analyses of hemimethylated DNA binding by the SeqA protein
Nucleic Acids Res., 32, 2004
4ORZ
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HIV-1 Nef protein in complex with single domain antibody sdAb19 and an engineered Hck SH3 domain
分子名称: Protein Nef, Tyrosine-protein kinase HCK, single domain antibody sdAb19
著者Geyer, M, Lulf, S.
登録日2014-02-12
公開日2014-03-26
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural basis for the inhibition of HIV-1 Nef by a high-affinity binding single-domain antibody.
Retrovirology, 11, 2014
4J34
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Crystal Structure of kynurenine 3-monooxygenase - truncated at position 394 plus HIS tag cleaved.
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, Kynurenine 3-monooxygenase
著者Amaral, M, Levy, C, Heyes, D.J, Lafite, P, Outeiro, T.F, Giorgini, F, Leys, D, Scrutton, N.S.
登録日2013-02-05
公開日2013-04-10
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.03 Å)
主引用文献Structural basis of kynurenine 3-monooxygenase inhibition.
Nature, 496, 2013
6SO5
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Homo sapiens WRB/CAML heterotetramer in complex with a TRC40 dimer
分子名称: ATPase ASNA1, Calcium signal-modulating cyclophilin ligand, Tail-anchored protein insertion receptor WRB, ...
著者McDowell, M.A, Heimes, M, Wild, K, Flemming, D, Sinning, I.
登録日2019-08-29
公開日2020-09-09
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献Structural Basis of Tail-Anchored Membrane Protein Biogenesis by the GET Insertase Complex.
Mol.Cell, 80, 2020
3PZD
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BU of 3pzd by Molmil
Structure of the myosin X MyTH4-FERM/DCC complex
分子名称: GLYCEROL, Myosin-X, Netrin receptor DCC
著者Wei, Z, Yan, J, Pan, L, Zhang, M.
登録日2010-12-14
公開日2011-02-23
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Cargo recognition mechanism of myosin X revealed by the structure of its tail MyTH4-FERM tandem in complex with the DCC P3 domain
Proc.Natl.Acad.Sci.USA, 108, 2011
4IX6
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Crystal structure of a Stt7 homolog from Micromonas algae soaked with ATP
分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, MsStt7d protein
著者Guo, J, Wei, X, Li, M, Pan, X, Chang, W, Liu, Z.
登録日2013-01-24
公開日2013-10-02
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structure of the catalytic domain of a state transition kinase homolog from Micromonas algae
Protein Cell, 4, 2013
3FDW
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Crystal structure of a C2 domain from human synaptotagmin-like protein 4
分子名称: Synaptotagmin-like protein 4
著者Bonanno, J.B, Rutter, M, Bain, K.T, Miller, S, Romero, R, Wasserman, S, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2008-11-26
公開日2008-12-23
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of a C2 domain from human synaptotagmin-like protein 4
To be Published
4OUU
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anti-MT1-MMP monoclonal antibody
分子名称: anti_MT1-MMP Heavy chain, anti_MT1-MMP light chain
著者Udi, Y, Grossman, M, Solomonov, I, Dym, O, Rozenberg, H, Koziol, A, Cuniasse, P, Dive, V, Arroyo, A.G, Irit, S, Israel Structural Proteomics Center (ISPC)
登録日2014-02-19
公開日2014-12-17
最終更新日2015-01-28
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Inhibition mechanism of membrane metalloprotease by an exosite-swiveling conformational antibody.
Structure, 23, 2015
6SOX
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Crystal structure of cAMP-dependent protein kinase A (CHO PKA) in complex with 4-carbamoylbenzoic acid
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 4-aminocarbonylbenzoic acid, DIMETHYL SULFOXIDE, ...
著者Oebbeke, M, Siefker, C, Heine, A, Klebe, G.
登録日2019-08-30
公開日2020-09-09
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (1.38 Å)
主引用文献Fragment Binding to Kinase Hinge: If Charge Distribution and Local pK a Shifts Mislead Popular Bioisosterism Concepts.
Angew.Chem.Int.Ed.Engl., 60, 2021
3EW7
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Crystal structure of the Lmo0794 protein from Listeria monocytogenes. Northeast Structural Genomics Consortium target LmR162.
分子名称: Lmo0794 protein
著者Vorobiev, S.M, Abashidze, M, Seetharaman, J, Wang, D, Foote, E.L, Ciccosanti, C, Janjua, H, Xiao, R, Acton, T.B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
登録日2008-10-14
公開日2008-11-11
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.73 Å)
主引用文献Crystal structure of the Lmo0794 protein from Listeria monocytogenes.
To be Published
6SIQ
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BU of 6siq by Molmil
Fragment AZ-012 binding at the p53pT387/14-3-3 sigma interface
分子名称: 14-3-3 protein sigma, 4-chloranyl-7-propan-2-yloxy-1-benzothiophene-2-carboximidamide, CHLORIDE ION, ...
著者Leysen, S, Wolter, M, Guillory, X, Genet, S, Somsen, B, Patel, J, Castaldi, P, Ottmann, C.
登録日2019-08-10
公開日2020-06-17
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.60121 Å)
主引用文献Fragment-based Differential Targeting of PPI Stabilizer Interfaces.
J.Med.Chem., 63, 2020
1IXK
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Crystal Structure Analysis of Methyltransferase Homolog Protein from Pyrococcus Horikoshii
分子名称: Methyltransferase
著者Ishikawa, I, Sakai, N, Yao, M, Watanabe, N, Tamura, T, Tanaka, I.
登録日2002-06-25
公開日2003-09-09
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of human p120 homologue protein PH1374 from Pyrococcus horikoshii
PROTEINS: STRUCT.,FUNCT.,GENET., 54, 2004
3FER
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BU of 3fer by Molmil
Crystal structure of n-terminal actin-binding domain from human filamin b (tandem ch-domains). northeast structural genomics consortium target hr5571a.
分子名称: ACETIC ACID, Filamin-B
著者Kuzin, A.P, Abashidze, M, Seetharaman, R, Shastry, R, Sahdev, S, Ciccosanti, C, Xiao, R, Everett, J.K, Huang, Y, Acton, T, Rost, B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
登録日2008-11-30
公開日2009-01-06
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure of n-terminal actin-binding domain from human filamin b (tandem ch-domains). northeast structural genomics consortium target hr5571a.
To be Published
6SJF
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BU of 6sjf by Molmil
Cryo-EM structure of the RecBCD Chi unrecognised complex
分子名称: Forked DNA substrate, RecBCD enzyme subunit RecB, RecBCD enzyme subunit RecC, ...
著者Cheng, K, Wilkinson, M, Wigley, D.B.
登録日2019-08-13
公開日2020-01-01
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献A conformational switch in response to Chi converts RecBCD from phage destruction to DNA repair.
Nat.Struct.Mol.Biol., 27, 2020
6F10
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GLIC mutant D88N
分子名称: ACETATE ION, CHLORIDE ION, DIUNDECYL PHOSPHATIDYL CHOLINE, ...
著者Hu, H.D, Delarue, M.
登録日2017-11-21
公開日2018-01-10
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Full mutational mapping of titratable residues helps to identify proton-sensors involved in the control of channel gating in the Gloeobacter violaceus pentameric ligand-gated ion channel.
PLoS Biol., 15, 2017
4OU7
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Crystal structure of DnaT84-153-dT10 ssDNA complex reveals a novel single-stranded DNA binding mode
分子名称: DNA (5'-D(P*TP*TP*TP*TP*TP*TP*TP*TP*TP*T)-3'), Primosomal protein 1
著者Liu, Z, Chen, P, Niu, L, Teng, M, Li, X.
登録日2014-02-15
公開日2014-08-13
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.83 Å)
主引用文献Crystal structure of DnaT84-153-dT10 ssDNA complex reveals a novel single-stranded DNA binding mode.
Nucleic Acids Res., 42, 2014
1IY0
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BU of 1iy0 by Molmil
Crystal structure of the FtsH ATPase domain with AMP-PNP from Thermus thermophilus
分子名称: ATP-dependent metalloprotease FtsH, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
著者Niwa, H, Tsuchiya, D, Makyio, H, Yoshida, M, Morikawa, K.
登録日2002-07-10
公開日2002-11-06
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献Hexameric ring structure of the ATPase domain of the membrane-integrated metalloprotease FtsH from Thermus thermophilus HB8
Structure, 10, 2002
4IZK
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Crystal structure of yellowtail ascites virus VP4 protease active site mutant (K674A) reveals both an acyl-enzyme complex and an empty active site
分子名称: BETA-MERCAPTOETHANOL, MAGNESIUM ION, Yellowtail Ascites Virus (YAV) VP4 protease
著者Paetzel, M, Chung, I.Y.W.
登録日2013-01-30
公開日2013-02-27
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal Structures of Yellowtail Ascites Virus VP4 Protease: TRAPPING AN INTERNAL CLEAVAGE SITE TRANS ACYL-ENZYME COMPLEX IN A NATIVE SER/LYS DYAD ACTIVE SITE.
J.Biol.Chem., 288, 2013
4OBZ
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BU of 4obz by Molmil
Structure of Cathepsin D with inhibitor 2-(3,4-dimethoxyphenyl)-N-[N-(4-methylbenzyl)carbamimidoyl]acetamide
分子名称: 2-(3,4-dimethoxyphenyl)-N-[N-(4-methylbenzyl)carbamimidoyl]acetamide, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Graedler, U, Czodrowski, P, Tsaklakidis, C, Klein, M, Maskos, K, Leuthner, B.
登録日2014-01-08
公開日2014-08-13
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structure-based optimization of non-peptidic Cathepsin D inhibitors.
Bioorg.Med.Chem.Lett., 24, 2014
3Q27
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Cyrstal structure of human alpha-synuclein (32-57) fused to maltose binding protein (MBP)
分子名称: GLYCEROL, Maltose-binding periplasmic protein/alpha-synuclein chimeric protein, SULFATE ION, ...
著者Zhao, M, Sawaya, M.R, Cascio, D, Eisenberg, D.
登録日2010-12-19
公開日2011-06-01
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.302 Å)
主引用文献Structures of segments of alpha-synuclein fused to maltose-binding protein suggest intermediate states during amyloid formation
Protein Sci., 20, 2011
4IUL
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MIF4G domain of DAP5
分子名称: Eukaryotic translation initiation factor 4 gamma 2, SULFATE ION
著者Frank, F, Virgili, G, Feoktistova, K, Sawicki, M, Sonenberg, N, Fraser, C, Nagar, B.
登録日2013-01-21
公開日2013-03-27
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural Analysis of the DAP5 MIF4G Domain and Its Interaction with eIF4A.
Structure, 21, 2013
4OVK
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Crystal structure of periplasmic solute binding protein from Veillonella parvula DSM 2008
分子名称: Periplasmic binding protein, TRIETHYLENE GLYCOL
著者Chang, C, Chhor, G, Endres, M, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
登録日2013-11-15
公開日2013-12-18
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.71 Å)
主引用文献Crystal structure of periplasmic solute binding protein from Veillonella parvula DSM 2008
To be published
6SBC
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Structure of type II terpene cyclase MstE from Scytonema in complex with farnesyl dihydroxybenzoate
分子名称: CHLORIDE ION, MstE, SODIUM ION, ...
著者Moosmann, P, Ecker, F, Leopold-Messer, S, Cahn, J.K.B, Groll, M, Piel, J.
登録日2019-07-19
公開日2020-07-15
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献A monodomain class II terpene cyclase assembles complex isoprenoid scaffolds.
Nat.Chem., 12, 2020

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