Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 51689 件

7TL8
DownloadVisualize
BU of 7tl8 by Molmil
1.95A resolution structure of independent phosphoglycerate mutase from S. aureus in complex with a macrocyclic peptide inhibitor (Sa-D3)
分子名称: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, MANGANESE (II) ION, Peptide Sa-D3
著者Liu, L, Lovell, S, Battaile, K.P, Dranchak, P, Queme, B, Aitha, M, van Neer, R.H.P, Kimura, H, Katho, T, Suga, H, Inglese, J.
登録日2022-01-18
公開日2022-08-10
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Serum-Stable and Selective Backbone-N-Methylated Cyclic Peptides That Inhibit Prokaryotic Glycolytic Mutases.
Acs Chem.Biol., 17, 2022
7P03
DownloadVisualize
BU of 7p03 by Molmil
Cryo-EM structure of Pdr5 from Saccharomyces cerevisiae in inward-facing conformation without nucleotides
分子名称: Pleiotropic ABC efflux transporter of multiple drugs
著者Szewczak-Harris, A, Wagner, M, Du, D, Schmitt, L, Luisi, B.F.
登録日2021-06-29
公開日2021-11-10
実験手法ELECTRON MICROSCOPY (3.45 Å)
主引用文献Structure and efflux mechanism of the yeast pleiotropic drug resistance transporter Pdr5.
Nat Commun, 12, 2021
1X6E
DownloadVisualize
BU of 1x6e by Molmil
Solution structures of the C2H2 type zinc finger domain of human Zinc finger protein 24
分子名称: ZINC ION, Zinc finger protein 24
著者Sato, M, Tomizawa, T, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-05-17
公開日2005-11-17
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structures of the C2H2 type zinc finger domain of human Zinc finger protein 24
To be Published
7ZI9
DownloadVisualize
BU of 7zi9 by Molmil
Crystal structure of dCK C4S-S74E mutant in complex with UDP and the OR0624 inhibitor
分子名称: 2-[2-[[2-methyl-5-[4-(4-methylpiperazin-1-yl)sulfonylphenyl]phenyl]-propyl-amino]-1,3-thiazol-4-yl]pyrimidine-4,6-diamine, Deoxycytidine kinase, SODIUM ION, ...
著者Saez-Ayala, M, Ben-Yaala, K, Betzi, S, Rebuffet, E, Morelli, X.
登録日2022-04-07
公開日2023-06-07
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献From a drug repositioning to a structure-based drug design approach to tackle acute lymphoblastic leukemia.
Nat Commun, 14, 2023
6HTB
DownloadVisualize
BU of 6htb by Molmil
Yeast 20S proteasome with human beta2c (S171G)
分子名称: CHLORIDE ION, MAGNESIUM ION, Probable proteasome subunit alpha type-7, ...
著者Huber, E.M, Groll, M.
登録日2018-10-03
公開日2019-01-30
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structure-Based Design of Inhibitors Selective for Human Proteasome beta 2c or beta 2i Subunits.
J.Med.Chem., 62, 2019
7P04
DownloadVisualize
BU of 7p04 by Molmil
Cryo-EM structure of Pdr5 from Saccharomyces cerevisiae in inward-facing conformation with ADP/ATP
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Pleiotropic ABC efflux transporter of multiple drugs
著者Szewczak-Harris, A, Wagner, M, Du, D, Schmitt, L, Luisi, B.F.
登録日2021-06-29
公開日2021-11-10
実験手法ELECTRON MICROSCOPY (2.85 Å)
主引用文献Structure and efflux mechanism of the yeast pleiotropic drug resistance transporter Pdr5.
Nat Commun, 12, 2021
7ZI2
DownloadVisualize
BU of 7zi2 by Molmil
Crystal structure of dCK C4S-S74E mutant in complex with UDP and the dCKi2 inhibitor
分子名称: Deoxycytidine kinase, N-[3-[[4-[4,6-bis(azanyl)pyrimidin-2-yl]-1,3-thiazol-2-yl]amino]-4-methyl-phenyl]-4-[(4-methylpiperazin-1-yl)methyl]benzamide, SODIUM ION, ...
著者Saez-Ayala, M, Ben-Yaala, K, Betzi, S, Rebuffet, E, Morelli, X.
登録日2022-04-07
公開日2023-06-07
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.18 Å)
主引用文献From a drug repositioning to a structure-based drug design approach to tackle acute lymphoblastic leukemia.
Nat Commun, 14, 2023
6NAV
DownloadVisualize
BU of 6nav by Molmil
Cryo-EM reconstruction of Sulfolobus islandicus LAL14/1 Pilus
分子名称: M9UD72
著者Wang, F, Cvirkaite-Krupovic, V, Prangishvili, D, Krupovic, M, Egelman, E.H.
登録日2018-12-06
公開日2019-05-08
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (4.1 Å)
主引用文献An extensively glycosylated archaeal pilus survives extreme conditions.
Nat Microbiol, 4, 2019
6HUQ
DownloadVisualize
BU of 6huq by Molmil
Yeast 20S proteasome with human beta2c (S171G) in complex with 20
分子名称: CHLORIDE ION, MAGNESIUM ION, Probable proteasome subunit alpha type-7, ...
著者Huber, E.M, Groll, M.
登録日2018-10-09
公開日2019-01-30
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structure-Based Design of Inhibitors Selective for Human Proteasome beta 2c or beta 2i Subunits.
J.Med.Chem., 62, 2019
6PTW
DownloadVisualize
BU of 6ptw by Molmil
NMR data-driven model of KRas-GMPPNP:RBD-CRD complex tethered to a nanodisc (state B)
分子名称: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, Apolipoprotein A-I, GTPase KRas, ...
著者Fang, Z, Lee, K, Gasmi-Seabrook, G, Ikura, M, Marshall, C.B.
登録日2019-07-16
公開日2020-05-13
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Multivalent assembly of KRAS with the RAS-binding and cysteine-rich domains of CRAF on the membrane.
Proc.Natl.Acad.Sci.USA, 117, 2020
6HVX
DownloadVisualize
BU of 6hvx by Molmil
Yeast 20S proteasome in complex with 4
分子名称: (2~{S})-~{N}-[(2~{S})-1-[[(2~{S})-1-[4-(aminomethyl)phenyl]-4-methylsulfonyl-butan-2-yl]amino]-1-oxidanylidene-propan-2-yl]-2-[[(2~{S})-2-azido-3-phenyl-propanoyl]amino]-4-methyl-pentanamide, CHLORIDE ION, MAGNESIUM ION, ...
著者Huber, E.M, Groll, M.
登録日2018-10-11
公開日2019-01-30
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structure-Based Design of Inhibitors Selective for Human Proteasome beta 2c or beta 2i Subunits.
J.Med.Chem., 62, 2019
6NUB
DownloadVisualize
BU of 6nub by Molmil
Pyruvate Kinase M2 Mutant - S437Y in Complex with L-serine
分子名称: 1,2-ETHANEDIOL, 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, DI(HYDROXYETHYL)ETHER, ...
著者Srivastava, D, Nandi, S, Dey, M.
登録日2019-01-31
公開日2019-08-21
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Mechanistic and Structural Insights into Cysteine-Mediated Inhibition of Pyruvate Kinase Muscle Isoform 2.
Biochemistry, 58, 2019
6NBC
DownloadVisualize
BU of 6nbc by Molmil
human methemoglobin state 1 determined using single-particle cryo-EM at 200 keV
分子名称: Hemoglobin subunit alpha, Hemoglobin subunit beta, PROTOPORPHYRIN IX CONTAINING FE
著者Herzik Jr, M.A, Wu, M, Lander, G.C.
登録日2018-12-06
公開日2019-03-13
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献High-resolution structure determination of sub-100 kDa complexes using conventional cryo-EM.
Nat Commun, 10, 2019
3MML
DownloadVisualize
BU of 3mml by Molmil
Allophanate Hydrolase Complex from Mycobacterium smegmatis, Msmeg0435-Msmeg0436
分子名称: Allophanate hydrolase subunit 1, Allophanate hydrolase subunit 2, CHLORIDE ION
著者Kaufmann, M, Chernishof, I, Shin, A, Germano, D, Sawaya, M.R, Waldo, G.S, Arbing, M.A, Perry, J, Eisenberg, D, Integrated Center for Structure and Function Innovation (ISFI), TB Structural Genomics Consortium (TBSGC)
登録日2010-04-20
公開日2010-04-28
最終更新日2017-11-08
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal Structure of Allphanate Hydrolase Complex from M. smegmatis, Msmeg0435-Msmeg0436
To be Published
4N0S
DownloadVisualize
BU of 4n0s by Molmil
Complex of ERK2 with caffeic acid
分子名称: CAFFEIC ACID, DI(HYDROXYETHYL)ETHER, DIMETHYL SULFOXIDE, ...
著者Kurinov, I, Malakhova, M.
登録日2013-10-02
公開日2014-08-27
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.7992 Å)
主引用文献Caffeic Acid Directly Targets ERK1/2 to Attenuate Solar UV-Induced Skin Carcinogenesis.
Cancer Prev Res (Phila), 7, 2014
6VXW
DownloadVisualize
BU of 6vxw by Molmil
NMR solution structure of natural scorpion toxin Cl13
分子名称: Beta-toxin Cl13
著者del Rio Portilla, F, Delepierre, M, Lopez Giraldo, A.E.
登録日2020-02-24
公開日2020-07-08
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献The three-dimensional structure of the toxic peptide Cl13 from the scorpion Centruroides limpidus.
Toxicon, 184, 2020
1AK1
DownloadVisualize
BU of 1ak1 by Molmil
FERROCHELATASE FROM BACILLUS SUBTILIS
分子名称: FERROCHELATASE
著者Al-Karadaghi, S, Hansson, M, Nikonov, S, Jonsson, B, Hederstedt, L.
登録日1997-05-28
公開日1997-12-03
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of ferrochelatase: the terminal enzyme in heme biosynthesis.
Structure, 5, 1997
6G75
DownloadVisualize
BU of 6g75 by Molmil
Crystal structure of the common ancestor of haloalkane dehalogenases and Renilla luciferase (AncHLD-RLuc)
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Common ancestor of haloalkane dehalogenase and Renilla luciferase (AncHLD-RLuc), ...
著者Chaloupkova, R, Waterman, J, Marek, M, Damborsky, J.
登録日2018-04-04
公開日2019-04-24
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.391 Å)
主引用文献Light-Emitting Dehalogenases: Reconstruction of Multifunctional Biocatalysts
Acs Catalysis, 2019
7TV4
DownloadVisualize
BU of 7tv4 by Molmil
Crystal structure of NEMO CoZi in complex with HOIP NZF1 and linear diubiquitin
分子名称: E3 ubiquitin-protein ligase RNF31, NF-kappa-B essential modulator, Polyubiquitin-C, ...
著者Rahighi, S, Iyer, M, Oveisi, H.
登録日2022-02-03
公開日2022-08-17
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (4.2 Å)
主引用文献Structural basis for the simultaneous recognition of NEMO and acceptor ubiquitin by the HOIP NZF1 domain.
Sci Rep, 12, 2022
6G82
DownloadVisualize
BU of 6g82 by Molmil
Serum paraoxonase-1 by directed evolution with the L69S/H115W/F222S mutations
分子名称: CALCIUM ION, Serum paraoxonase-1 by directed evolution with the L69S/H115W/F222S mutations
著者Ben-David, M, Sussman, J.L, Tawfik, D.S.
登録日2018-04-07
公開日2019-03-20
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.401 Å)
主引用文献Enzyme Evolution: An Epistatic Ratchet versus a Smooth Reversible Transition.
Mol.Biol.Evol., 37, 2020
7ZIB
DownloadVisualize
BU of 7zib by Molmil
Crystal structure of dCK C4S-S74E mutant in complex with UDP and the OR0635 inhibitor
分子名称: 2-[2-[[5-[3-methoxy-4-(4-methylpiperazin-1-yl)sulfonyl-phenyl]-2-methyl-phenyl]-propyl-amino]-1,3-thiazol-4-yl]pyrimidine-4,6-diamine, Deoxycytidine kinase, SODIUM ION, ...
著者Ben-Yaala, K, Saez-Ayala, M, Betzi, S, Rebuffet, E, Morelli, X.
登録日2022-04-07
公開日2023-06-07
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献From a drug repositioning to a structure-based drug design approach to tackle acute lymphoblastic leukemia.
Nat Commun, 14, 2023
6W9N
DownloadVisualize
BU of 6w9n by Molmil
Solution structure of the FYVE domain of ALFY
分子名称: WD repeat and FYVE domain-containing protein 3, ZINC ION
著者Reinhart, E.F, Pellegrini, M, Ragusa, M.J.
登録日2020-03-23
公開日2020-12-23
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献A highly conserved glutamic acid in ALFY inhibits membrane binding to aid in aggregate clearance.
Traffic, 22, 2021
6NWR
DownloadVisualize
BU of 6nwr by Molmil
Thioester acyl-intermediate of Apolipoprotein N-acyltransferase (Lnt)
分子名称: Apolipoprotein N-acyltransferase, DODECANE, DODECYL-BETA-D-MALTOSIDE
著者Wiseman, B, Hogbom, M.
登録日2019-02-07
公開日2020-01-29
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Conformational changes in Apolipoprotein N-acyltransferase (Lnt).
Sci Rep, 10, 2020
7ZI8
DownloadVisualize
BU of 7zi8 by Molmil
Crystal structure of dCK C4S-S74E mutant in complex with UDP and the OR0602 inhibitor
分子名称: 2-[2-[[2-methyl-5-[6-[2-(4-methylpiperazin-1-yl)ethyl]pyridin-3-yl]phenyl]-propyl-amino]-1,3-thiazol-4-yl]pyrimidine-4,6-diamine, Deoxycytidine kinase, SODIUM ION, ...
著者Saez-Ayala, M, Ben-Yaala, K, Betzi, S, Rebuffet, E, Morelli, X.
登録日2022-04-07
公開日2023-06-07
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献From a drug repositioning to a structure-based drug design approach to tackle acute lymphoblastic leukemia.
Nat Commun, 14, 2023
4RG2
DownloadVisualize
BU of 4rg2 by Molmil
Tudor Domain of Tumor suppressor p53BP1 with small molecule ligand
分子名称: 1,2-ETHANEDIOL, 3-bromo-N-[3-(tert-butylamino)propyl]benzamide, Tumor suppressor p53-binding protein 1, ...
著者Dong, A, Mader, P, James, L, Perfetti, M, Tempel, W, Frye, S, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Brown, P.J, Structural Genomics Consortium (SGC)
登録日2014-09-29
公開日2014-10-15
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Identification of a fragment-like small molecule ligand for the methyl-lysine binding protein, 53BP1.
ACS Chem. Biol., 10, 2015

224572

件を2024-09-04に公開中

PDB statisticsPDBj update infoContact PDBjnumon