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PDB: 199 results

7LLQ
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Substrate-dependent divergence of leukotriene A4 hydrolase aminopeptidase activity
Descriptor: 1-benzyl-4-methoxybenzene, 1-{4-oxo-4-[(2S)-pyrrolidin-2-yl]butanoyl}-L-proline, Leukotriene A-4 hydrolase, ...
Authors:Lee, K.H, Lee, S.H, Shim, Y.M, Paige, M, Noble, S.M.
Deposit date:2021-02-04
Release date:2022-06-22
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Substrate-dependent modulation of the leukotriene A 4 hydrolase aminopeptidase activity and effect in a murine model of acute lung inflammation.
Sci Rep, 12, 2022
1CQ0
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SOLUTION STRUCTURE OF A HUMAN HYPOCRETIN-2/OREXIN-B'SOLUTION STRUCTURE OF A HUMAN HYPOCRETIN-2/OREXIN-B '
Descriptor: PROTEIN (NEW HYPOTHALAMIC NEUROPEPTIDE/OREXIN-B28)
Authors:Lee, K.-H, Bang, E.J, Chae, K.-J, Lee, D.W, Lee, W.
Deposit date:1999-08-04
Release date:2000-01-10
Last modified:2024-04-10
Method:SOLUTION NMR
Cite:Solution structure of a new hypothalamic neuropeptide, human hypocretin-2/orexin-B.
Eur.J.Biochem., 266, 1999
7C12
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beta1 domain-swapped structure of monothiol cGrx1(C16S)
Descriptor: Glutaredoxin
Authors:Lee, K, Hwang, K.Y.
Deposit date:2020-05-02
Release date:2020-11-18
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.803 Å)
Cite:Monothiol and dithiol glutaredoxin-1 from clostridium oremlandii: identification of domain-swapped structures by NMR, X-ray crystallography and HDX mass spectrometry.
Iucrj, 7, 2020
7C13
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beta1 domain-swapped structure of monothiol cGrx1(C16S)
Descriptor: Glutaredoxin, Peptide methionine sulfoxide reductase MsrA
Authors:Lee, K, Hwang, K.Y.
Deposit date:2020-05-02
Release date:2020-11-18
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.799 Å)
Cite:Monothiol and dithiol glutaredoxin-1 from clostridium oremlandii: identification of domain-swapped structures by NMR, X-ray crystallography and HDX mass spectrometry.
Iucrj, 7, 2020
7C10
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Dithiol cGrx1
Descriptor: Glutaredoxin
Authors:Lee, K, Hwang, K.Y.
Deposit date:2020-05-02
Release date:2020-11-18
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.806 Å)
Cite:Monothiol and dithiol glutaredoxin-1 from clostridium oremlandii: identification of domain-swapped structures by NMR, X-ray crystallography and HDX mass spectrometry.
Iucrj, 7, 2020
7RSE
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NMR-driven structure of the KRAS4B-G12D "alpha-beta" dimer on a lipid bilayer nanodisc
Descriptor: 5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE, Apolipoprotein A-I, GTPase KRas, ...
Authors:Lee, K, Enomoto, M, Gebregiworgis, T, Gasmi-Seabrook, G.M, Ikura, M, Marshall, C.B.
Deposit date:2021-08-11
Release date:2021-09-22
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Oncogenic KRAS G12D mutation promotes dimerization through a second, phosphatidylserine-dependent interface: a model for KRAS oligomerization.
Chem Sci, 12, 2021
7RSC
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BU of 7rsc by Molmil
NMR-driven structure of the KRAS4B-G12D "alpha-alpha" dimer on a lipid bilayer nanodisc
Descriptor: 5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE, Apolipoprotein A-I, GTPase KRas, ...
Authors:Lee, K, Enomoto, M, Gebregiworgis, T, Gasmi-Seabrook, G.M, Ikura, M, Marshall, C.B.
Deposit date:2021-08-11
Release date:2021-09-22
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Oncogenic KRAS G12D mutation promotes dimerization through a second, phosphatidylserine-dependent interface: a model for KRAS oligomerization.
Chem Sci, 12, 2021
7M5Y
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human ATP13A2 in the outward-facing E2 state bound to spermine and magnesium fluoride
Descriptor: (2R)-3-{[(S)-hydroxy{[(1S,2R,3R,4S,5S,6R)-2,4,6-trihydroxy-3,5-bis(phosphonooxy)cyclohexyl]oxy}phosphoryl]oxy}propane-1,2-diyl dioctanoate, 2-acetamido-2-deoxy-beta-D-glucopyranose, CHOLESTEROL, ...
Authors:Lee, K.P.K.
Deposit date:2021-03-25
Release date:2022-03-30
Last modified:2022-04-27
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structural mechanisms for gating and ion selectivity of the human polyamine transporter ATP13A2.
Mol.Cell, 81, 2021
7M5X
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Human ATP13A2 in the outward-facing E2 state bound to spermine and beryllium fluoride
Descriptor: (2R)-3-{[(S)-hydroxy{[(1S,2R,3R,4S,5S,6R)-2,4,6-trihydroxy-3,5-bis(phosphonooxy)cyclohexyl]oxy}phosphoryl]oxy}propane-1,2-diyl dioctanoate, 2-acetamido-2-deoxy-beta-D-glucopyranose, BERYLLIUM TRIFLUORIDE ION, ...
Authors:Lee, K.P.K.
Deposit date:2021-03-25
Release date:2022-03-30
Last modified:2022-04-27
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Structural mechanisms for gating and ion selectivity of the human polyamine transporter ATP13A2.
Mol.Cell, 81, 2021
7M5V
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human ATP13A2 in the AMPPNP-bound occluded state
Descriptor: (2R)-3-{[(S)-hydroxy{[(1S,2R,3R,4S,5S,6R)-2,4,6-trihydroxy-3,5-bis(phosphonooxy)cyclohexyl]oxy}phosphoryl]oxy}propane-1,2-diyl dioctanoate, 1-DODECANOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Lee, K.P.K.
Deposit date:2021-03-24
Release date:2022-03-30
Last modified:2022-04-27
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Structural mechanisms for gating and ion selectivity of the human polyamine transporter ATP13A2.
Mol.Cell, 81, 2021
8VRS
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Mucin 16 peptide fused to MBP in complex with 4H11-scFv antibody
Descriptor: 4H11 scFv chain, Maltose/maltodextrin-binding periplasmic protein,Mucin-16
Authors:Lee, K, Perry, K, Yeku, O.O, Spriggs, D.R.
Deposit date:2024-01-22
Release date:2024-04-03
Method:X-RAY DIFFRACTION (2.47 Å)
Cite:Structural basis for antibody recognition of the proximal MUC16 ectodomain.
J Ovarian Res, 17, 2024
8VRR
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BU of 8vrr by Molmil
4H11-scFv antibody
Descriptor: 4H11 scFv chain
Authors:Lee, K, Perry, K, Yeku, O.O, Spriggs, D.R.
Deposit date:2024-01-22
Release date:2024-04-03
Method:X-RAY DIFFRACTION (2.36 Å)
Cite:Structural basis for antibody recognition of the proximal MUC16 ectodomain.
J Ovarian Res, 17, 2024
7E3W
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BU of 7e3w by Molmil
Metallo beta-lactamase fold protein (cAMP bound)
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, CHLORIDE ION, ...
Authors:Lee, K.-Y, Kim, D.-G, Lee, B.-J.
Deposit date:2021-02-09
Release date:2022-02-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structural and functional studies of SAV1707 from Staphylococcus aureus elucidate its distinct metal-dependent activity and a crucial residue for catalysis.
Acta Crystallogr D Struct Biol, 77, 2021
7E3V
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Metallo beta-lactamase fold protein (cAMP free)
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, NICKEL (II) ION, ...
Authors:Lee, K.-Y, Kim, D.-G, Lee, B.-J.
Deposit date:2021-02-09
Release date:2022-02-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structural and functional studies of SAV1707 from Staphylococcus aureus elucidate its distinct metal-dependent activity and a crucial residue for catalysis.
Acta Crystallogr D Struct Biol, 77, 2021
3ZTH
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BU of 3zth by Molmil
Crystal structure of Stu0660 of Streptococcus thermophilus
Descriptor: MAGNESIUM ION, STU0660
Authors:Lee, K.-H, Robinson, H, Oh, B.-H.
Deposit date:2011-07-08
Release date:2012-07-11
Last modified:2012-10-31
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Identification, Structural, and Biochemical Characterization of a Group of Large Csn2 Proteins Involved in Crispr-Mediated Bacterial Immunity.
Proteins, 80, 2012
4QD2
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BU of 4qd2 by Molmil
Molecular basis for disruption of E-cadherin adhesion by botulinum neurotoxin A complex
Descriptor: CALCIUM ION, Cadherin-1, Hemagglutinin component HA17, ...
Authors:Lee, K, Zhong, X, Gu, S, Kruel, A, Dorner, M.B, Perry, K, Rummel, A, Dong, M, Jin, R.
Deposit date:2014-05-13
Release date:2014-06-25
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Molecular basis for disruption of E-cadherin adhesion by botulinum neurotoxin A complex.
Science, 344, 2014
2WCV
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BU of 2wcv by Molmil
Crystal structure of bacterial FucU
Descriptor: L-FUCOSE MUTAROTASE, alpha-L-fucopyranose
Authors:Lee, K.-H, Kim, M.-S, Suh, H.-Y, Ku, B, Song, Y.-L, Oh, B.-H.
Deposit date:2009-03-17
Release date:2009-11-10
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal Structures and Enzyme Mechanism of a Dual Fucose Mutarotase/Ribose Pyranase
J.Mol.Biol., 391, 2009
1P0O
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HP (2-20) substitution of Trp for Gln and Asp at position 17 and 19 MODIFICATION IN SDS-D25 MICELLES
Descriptor: 19-mer peptide from 50S ribosomal protein L1
Authors:Lee, K.H, Lee, D.G, Park, Y.K, Harm, K.S, Kim, Y.M.
Deposit date:2003-04-10
Release date:2003-05-20
Last modified:2021-11-10
Method:SOLUTION NMR
Cite:Interactions between antimicrobial peptide, HP(2-20) derived from helicobacter pylori, and membrain studied by nmr spectroscopy
To be published
1P0L
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BU of 1p0l by Molmil
HP (2-20) Substitution GLN To TRP Modification In SDS-D25 MICELLES
Descriptor: 19-mer peptide from 50S ribosomal protein L1
Authors:Lee, K.H, Lee, D.G, Park, Y.K, Harm, K.S, Kim, Y.M.
Deposit date:2003-04-10
Release date:2003-05-20
Last modified:2021-11-10
Method:SOLUTION NMR
Cite:Interactions between antimicrobial peptide, HP(2-20) derived from helicobacter pylori, and membrain studied by nmr spectroscopy
To be published
1P5L
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HP (2-20) Substitution PHE5 to SER modification in sds-d25 micelles
Descriptor: 19-mer peptide from 50S ribosomal protein L1
Authors:Lee, K.H, Lee, D.G, Park, Y.K, Harm, K.S, Kim, Y.M.
Deposit date:2003-04-27
Release date:2003-06-03
Last modified:2021-11-10
Method:SOLUTION NMR
Cite:Interactions between antimicrobial peptide, HP(2-20) derived from helicobacter pylori, and membrain studied by nmr spectroscopy
To be published
1P5K
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BU of 1p5k by Molmil
HP (2-20) Substitution SER to LEU11 modification in sds-d25 micelles
Descriptor: 19-mer peptide from 50S ribosomal protein L1
Authors:Lee, K.H, Lee, D.G, Park, Y.K, Harm, K.S, Kim, Y.M.
Deposit date:2003-04-27
Release date:2003-06-03
Last modified:2021-11-10
Method:SOLUTION NMR
Cite:Interactions between antimicrobial peptide, HP(2-20) derived from helicobacter pylori, and membrain studied by nmr spectroscopy
To be published
1P0J
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BU of 1p0j by Molmil
HP (2-20) Substitution ASP To TRP Modification In SDS-D25 Micelles
Descriptor: 19-mer peptide from 50S ribosomal protein L1
Authors:Lee, K.H, Lee, D.G, Park, Y.K, Harm, K.S, Kim, Y.M.
Deposit date:2003-04-10
Release date:2003-05-20
Last modified:2021-11-10
Method:SOLUTION NMR
Cite:Interactions between antimicrobial peptide, HP(2-20) derived from helicobacter pylori, and membrain studied by nmr spectroscopy
To be published
1P0G
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BU of 1p0g by Molmil
Structure of Antimicrobial Peptide, HP (2-20) and its Analogues Derived from Helicobacter pylori, as Determined by 1H NMR Spectroscopy
Descriptor: 19-mer peptide from 50S ribosomal protein L1
Authors:Lee, K.H, Lee, D.G, Park, Y.K, Harm, K.S, Kim, Y.M.
Deposit date:2003-04-10
Release date:2003-05-20
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Interactions between antimicrobial peptide, HP(2-20) derived from helicobacter pylori, and membrain studied by nmr spectroscopy
To be published
2WCU
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BU of 2wcu by Molmil
Crystal structure of mammalian FucU
Descriptor: PROTEIN FUCU HOMOLOG, alpha-L-fucopyranose
Authors:Lee, K.-H, Kim, M.-S, Suh, H.-Y, Ku, B, Song, Y.-L, Oh, B.-H.
Deposit date:2009-03-17
Release date:2009-11-10
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal Structures and Enzyme Mechanism of a Dual Fucose Mutarotase/Ribose Pyranase
J.Mol.Biol., 391, 2009
6W4E
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BU of 6w4e by Molmil
NMR-driven structure of KRAS4B-GTP homodimer on a lipid bilayer nanodisc
Descriptor: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE, Apolipoprotein A-I, ...
Authors:Lee, K, Fang, Z, Enomoto, M, Gasmi-Seabrook, G.M, Zheng, L, Marshall, C.B, Ikura, M.
Deposit date:2020-03-10
Release date:2020-04-15
Last modified:2020-07-08
Method:SOLUTION NMR
Cite:Two Distinct Structures of Membrane-Associated Homodimers of GTP- and GDP-Bound KRAS4B Revealed by Paramagnetic Relaxation Enhancement.
Angew.Chem.Int.Ed.Engl., 59, 2020

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