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PDB: 962 results

5MJ1
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BU of 5mj1 by Molmil
Extracellular domain of human CD83 - rhombohedral crystal form
Descriptor: CD83 antigen, DI(HYDROXYETHYL)ETHER
Authors:Klingl, S, Egerer-Sieber, C, Schmid, B, Weiler, S, Muller, Y.A.
Deposit date:2016-11-29
Release date:2017-03-29
Last modified:2018-03-07
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure of the Extracellular Domain of the Human Dendritic Cell Surface Marker CD83.
J. Mol. Biol., 429, 2017
3KM0
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BU of 3km0 by Molmil
17betaHSD1 in complex with 3beta-diol
Descriptor: 5-ALPHA-ANDROSTANE-3-BETA,17BETA-DIOL, Estradiol 17-beta-dehydrogenase 1, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Mazumdar, M, Lin, S.-X.
Deposit date:2009-11-09
Release date:2010-11-10
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Molecular basis of sex-steroid translation
To be Published
1QYX
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BU of 1qyx by Molmil
Crystal structure of human estrogenic 17beta-hydroxysteroid dehydrogenase complex with androstenedione and NADP
Descriptor: 4-ANDROSTENE-3-17-DIONE, Estradiol 17 beta-dehydrogenase 1, GLYCEROL, ...
Authors:Shi, R, Lin, S.X.
Deposit date:2003-09-12
Release date:2004-08-03
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Cofactor hydrogen bonding onto the protein main chain is conserved in the short chain dehydrogenase/reductase family and contributes to nicotinamide orientation.
J.Biol.Chem., 279, 2004
1QYV
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BU of 1qyv by Molmil
Crystal structure of human estrogenic 17beta-hydroxysteroid dehydrogenase complex with NADP
Descriptor: Estradiol 17 beta-dehydrogenase 1, GLYCEROL, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Shi, R, Lin, S.X.
Deposit date:2003-09-12
Release date:2004-08-03
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Cofactor hydrogen bonding onto the protein main chain is conserved in the short chain dehydrogenase/reductase family and contributes to nicotinamide orientation.
J.Biol.Chem., 279, 2004
1QYW
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BU of 1qyw by Molmil
Crystal structure of human estrogenic 17beta-hydroxysteroid dehydrogenase complex with androstanedione and NADP
Descriptor: 5ALPHA-ANDROSTAN-3,17-DIONE, Estradiol 17 beta-dehydrogenase 1, GLYCEROL, ...
Authors:Shi, R, Lin, S.X.
Deposit date:2003-09-12
Release date:2004-08-03
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Cofactor hydrogen bonding onto the protein main chain is conserved in the short chain dehydrogenase/reductase family and contributes to nicotinamide orientation.
J.Biol.Chem., 279, 2004
6LSA
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BU of 6lsa by Molmil
Complex structure of bovine herpesvirus 1 glycoprotein D and bovine nectin-1 IgV
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein D, ...
Authors:Yue, D, Chen, Z.J, Yang, F.L, Ye, F, Lin, S, Cheng, Y.W, Wang, J.C, Chen, Z.M, Lin, X, Yang, J, Chen, H, Zhang, Z.L, You, Y, Sun, H.L, Wen, A, Wang, L.L, Zheng, Y, Cao, Y, Li, Y.H, Lu, G.W.
Deposit date:2020-01-17
Release date:2020-06-17
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.204 Å)
Cite:Crystal structure of bovine herpesvirus 1 glycoprotein D bound to nectin-1 reveals the basis for its low-affinity binding to the receptor.
Sci Adv, 6, 2020
6LS9
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BU of 6ls9 by Molmil
Crystal structure of bovine herpesvirus 1 glycoprotein D
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein D
Authors:Yue, D, Chen, Z.J, Yang, F.L, Ye, F, Lin, S, Cheng, Y.W, Wang, J.C, Chen, Z.M, Lin, X, Yang, J, Chen, H, Zhang, Z.L, You, Y, Sun, H.L, Wen, A, Wang, L.L, Zheng, Y, Cao, Y, Li, Y.H, Lu, G.W.
Deposit date:2020-01-17
Release date:2020-06-17
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.503 Å)
Cite:Crystal structure of bovine herpesvirus 1 glycoprotein D bound to nectin-1 reveals the basis for its low-affinity binding to the receptor.
Sci Adv, 6, 2020
8Y2I
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BU of 8y2i by Molmil
Ternary structure of dLesCas12e-sgRNA-dsDNA
Descriptor: DNA (35-MER), dLesCas12e, sgRNA
Authors:Zhang, S, Lin, S, Liu, J.J.G.
Deposit date:2024-01-26
Release date:2024-10-23
Method:ELECTRON MICROSCOPY (2.92 Å)
Cite:Ternary structure of dVemCas12e-sgRNA-dsDNA
To Be Published
8XYC
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BU of 8xyc by Molmil
Ternary structure of dVemCas12e-sgRNA-dsDNA
Descriptor: DNA (35-MER), RNA (147-MER), dVemCas12e
Authors:Zhang, S, Lin, S, Liu, J.J.G.
Deposit date:2024-01-19
Release date:2024-10-23
Method:ELECTRON MICROSCOPY (2.51 Å)
Cite:Ternary structure of dVemCas12e-sgRNA-dsDNA
To Be Published
7X3Z
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BU of 7x3z by Molmil
Crystal structure of human 17beta-hydroxysteroid dehydrogenase type 1 complexed with estrone and NAD
Descriptor: (9beta,13alpha)-3-hydroxyestra-1,3,5(10)-trien-17-one, 17-beta-hydroxysteroid dehydrogenase type 1, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Li, T, Lin, S.X, Yin, H.
Deposit date:2022-03-01
Release date:2023-01-25
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:New insights into the substrate inhibition of human 17 beta-hydroxysteroid dehydrogenase type 1.
J.Steroid Biochem.Mol.Biol., 228, 2023
8JRU
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BU of 8jru by Molmil
Cryo-EM structure of the glucagon receptor bound to beta-arrestin 1 in ligand-free state
Descriptor: Beta-arrestin 1 and single-chain fragment variable 30 (scFv30), HA signal peptide,HPC4 purification tag,Glucagon receptor,C-terminal tail of Vasopressin V2 receptor, Nanobody 32, ...
Authors:Chen, K, Zhang, C, Lin, S, Zhao, Q, Wu, B.
Deposit date:2023-06-17
Release date:2023-08-16
Last modified:2024-10-30
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Tail engagement of arrestin at the glucagon receptor.
Nature, 620, 2023
8JRV
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BU of 8jrv by Molmil
Cryo-EM structure of the glucagon receptor bound to glucagon and beta-arrestin 1
Descriptor: Beta-arrestin 1 and single-chain fragment variable 30 (scFv30), Glucagon, HA signal peptide,HPC4 purification tag,Glucagon receptor,C-terminal tail of Vasopressin V2 receptor, ...
Authors:Chen, K, Zhang, C, Lin, S, Zhao, Q, Wu, B.
Deposit date:2023-06-17
Release date:2023-08-16
Last modified:2023-09-13
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Tail engagement of arrestin at the glucagon receptor.
Nature, 620, 2023
7XGL
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BU of 7xgl by Molmil
Quinolinate Phosphoribosyl Transferase (QAPRTase) from Streptomyces pyridomyceticus NRRL B-2517 in Apo form
Descriptor: CHLORIDE ION, GLYCEROL, Quinolinate Phosphoribosyl Transferase, ...
Authors:Zhou, Z, Yang, X, Huang, T, Wang, X, Liang, R, Zheng, J, Dai, S, Lin, S, Deng, Z.
Deposit date:2022-04-05
Release date:2023-03-22
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:Bifunctional NadC Homologue PyrZ Catalyzes Nicotinic Acid Formation in Pyridomycin Biosynthesis.
Acs Chem.Biol., 18, 2023
7XGM
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BU of 7xgm by Molmil
Quinolinate Phosphoribosyl Transferase (QAPRTase) from Streptomyces pyridomyceticus NRRL B-2517 in complex with Quinolinic Acid (QA)
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, QUINOLINIC ACID, ...
Authors:Zhou, Z, Yang, X, Huang, T, Wang, X, Liang, R, Zheng, J, Dai, S, Lin, S, Deng, Z.
Deposit date:2022-04-05
Release date:2023-03-22
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Bifunctional NadC Homologue PyrZ Catalyzes Nicotinic Acid Formation in Pyridomycin Biosynthesis.
Acs Chem.Biol., 18, 2023
7XGN
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BU of 7xgn by Molmil
Quinolinate Phosphoribosyl Transferase (QAPRTase) from Streptomyces pyridomyceticus NRRL B-2517 in complex with Nicotinic Acid (NA)
Descriptor: CHLORIDE ION, NICOTINIC ACID, Quinolinate Phosphoribosyl Transferase, ...
Authors:Zhou, Z, Yang, X, Huang, T, Wang, X, Liang, R, Zheng, J, Dai, S, Lin, S, Deng, Z.
Deposit date:2022-04-05
Release date:2023-03-22
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Bifunctional NadC Homologue PyrZ Catalyzes Nicotinic Acid Formation in Pyridomycin Biosynthesis.
Acs Chem.Biol., 18, 2023
6UMX
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BU of 6umx by Molmil
Structural basis for specific inhibition of extracellular activation of pro/latent myostatin by SRK-015
Descriptor: GL29H4-16 Fab Heavy Chain,GL29H4-16 Fab Heavy Chain, GL29H4-16 Fab Light Chain,GL29H4-16 Fab Light Chain, GLYCEROL, ...
Authors:Dagbay, K.B, Treece, E, Streich Jr, F.C, Jackson, J.W, Faucette, R.R, Nikiforov, A, Lin, S.C, Bostion, C.J, Nicholls, S.B, Capili, A.D, Carven, G.J.
Deposit date:2019-10-10
Release date:2020-02-26
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.79 Å)
Cite:Structural basis of specific inhibition of extracellular activation of pro- or latent myostatin by the monoclonal antibody SRK-015.
J.Biol.Chem., 295, 2020
6LS4
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BU of 6ls4 by Molmil
A novel anti-tumor agent S-40 in complex with tubulin
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 3-[(4-cyclopropylphenyl)sulfonylamino]-4-methyl-N-(pyridin-3-ylmethyl)benzamide, GLYCEROL, ...
Authors:Du, T, Lin, S, Ji, M, Xue, N, Liu, Y, Zhang, K, Lu, D, Chen, X, Xu, H.
Deposit date:2020-01-17
Release date:2021-01-20
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:A novel orally active microtubule destabilizing agent S-40 targets the colchicine-binding site and shows potent antitumor activity.
Cancer Lett., 495, 2020
8IYQ
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BU of 8iyq by Molmil
Structure of CbCas9 bound to 20-nucleotide complementary DNA substrate
Descriptor: NTS, TS, deadCbCas9, ...
Authors:Zhang, S, Lin, S, Liu, J.J.G.
Deposit date:2023-04-05
Release date:2024-06-05
Last modified:2024-06-26
Method:ELECTRON MICROSCOPY (2.46 Å)
Cite:Pro-CRISPR PcrIIC1-associated Cas9 system for enhanced bacterial immunity.
Nature, 630, 2024
6LNN
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BU of 6lnn by Molmil
Crystal structure of MERS-CoV N-NTD complexed with ligand P4-1
Descriptor: 5-propoxy-1H-indole, Nucleoprotein
Authors:Hou, M.H, Lin, S.M, Hsu, J.N.
Deposit date:2019-12-31
Release date:2021-01-13
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.634 Å)
Cite:Targeting the N-Terminus Domain of the Coronavirus Nucleocapsid Protein Induces Abnormal Oligomerization via Allosteric Modulation.
Front Mol Biosci, 9, 2022
8Z1E
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BU of 8z1e by Molmil
A homotrimeric GPCR architecture of the human cytomegalovirus (UL78) revealed by cryo-EM
Descriptor: Uncharacterized protein UL78
Authors:Chen, Y, Li, Y, Zhou, Q, Cong, Z, Lin, S, Yan, J, Chen, X, Yang, D, Ying, T, Wang, M.-W.
Deposit date:2024-04-11
Release date:2024-05-15
Last modified:2024-10-30
Method:ELECTRON MICROSCOPY (3.12 Å)
Cite:A homotrimeric GPCR architecture of the human cytomegalovirus revealed by cryo-EM.
Cell Discov, 10, 2024
2HTQ
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BU of 2htq by Molmil
N8 neuraminidase in complex with zanamivir
Descriptor: Neuraminidase, ZANAMIVIR
Authors:Russell, R.J, Haire, L.F, Stevens, D.J, Collins, P.J, Lin, Y.P, Blackburn, G.M, Hay, A.J, Gamblin, S.J, Skehel, J.J.
Deposit date:2006-07-26
Release date:2006-09-05
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The structure of H5N1 avian influenza neuraminidase suggests new opportunities for drug design.
Nature, 443, 2006
2HTU
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BU of 2htu by Molmil
N8 neuraminidase in complex with peramivir
Descriptor: 3-(1-ACETYLAMINO-2-ETHYL-BUTYL)-4-GUANIDINO-2-HYDROXY-CYCLOPENTANECARBOXYLIC ACID, Neuraminidase
Authors:Russell, R.J, Haire, L.F, Stevens, D.J, Collins, P.J, Lin, Y.P, Blackburn, G.M, Hay, A.J, Gamblin, S.J, Skehel, J.J.
Deposit date:2006-07-26
Release date:2006-09-05
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The structure of H5N1 avian influenza neuraminidase suggests new opportunities for drug design.
Nature, 443, 2006
2HT5
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BU of 2ht5 by Molmil
N8 Neuraminidase
Descriptor: 2-acetamido-2-deoxy-alpha-D-glucopyranose, CALCIUM ION, Neuraminidase
Authors:Russell, R.J, Haire, L.F, Stevens, D.J, Collins, P.J, Lin, Y.P, Blackburn, G.M, Hay, A.J, Gamblin, S.J, Skehel, J.J.
Deposit date:2006-07-25
Release date:2006-09-05
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The structure of H5N1 avian influenza neuraminidase suggests new opportunities for drug design.
Nature, 443, 2006
2HTR
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BU of 2htr by Molmil
N8 neuraminidase in complex with DANA
Descriptor: 2-DEOXY-2,3-DEHYDRO-N-ACETYL-NEURAMINIC ACID, Neuraminidase
Authors:Russell, R.J, Haire, L.F, Stevens, D.J, Collins, P.J, Lin, Y.P, Blackburn, G.M, Hay, A.J, Gamblin, S.J, Skehel, J.J.
Deposit date:2006-07-26
Release date:2006-09-05
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The structure of H5N1 avian influenza neuraminidase suggests new opportunities for drug design.
Nature, 443, 2006
2HT7
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BU of 2ht7 by Molmil
N8 neuraminidase in open complex with oseltamivir
Descriptor: (3R,4R,5S)-4-(acetylamino)-5-amino-3-(pentan-3-yloxy)cyclohex-1-ene-1-carboxylic acid, Neuraminidase
Authors:Russell, R.J, Haire, L.F, Stevens, D.J, Collins, P.J, Lin, Y.P, Blackburn, G.M, Hay, A.J, Gamblin, S.J, Skehel, J.J.
Deposit date:2006-07-25
Release date:2006-09-05
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The structure of H5N1 avian influenza neuraminidase suggests new opportunities for drug design.
Nature, 443, 2006

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