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PDB: 227 results

6WBU
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Putative Peptidyl Prolyl cis-trans Isomerase FKBP12 from Mycobacterium tuberculosis
Descriptor: FKBP12 from Mycobacterium tuberculosis
Authors:Andrade, G.C, Silva, L.F.C, Almeida, F.C.L, AnoBom, C.D.
Deposit date:2020-03-27
Release date:2021-03-31
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structure and Biochemical Characterization of a Putative Peptidyl Prolyl cis-trans Isomerase FKBP12 from Mycobacterium tuberculosis
To Be Published
4M4O
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Crystal structure of the aptamer minE-lysozyme complex
Descriptor: Lysozyme C, MAGNESIUM ION, RNA (59-MER), ...
Authors:Malashkevich, V.N, Padlan, F.C, Toro, R, Girvin, M, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2013-08-07
Release date:2013-12-18
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of the aptamer minE-lysozyme complex
to be published
7T1E
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Structure of monomeric and dimeric human CCL20
Descriptor: C-C motif chemokine 20, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Peterson, F.C, Riutta, S.J, Volkman, B.F.
Deposit date:2021-12-01
Release date:2022-12-14
Last modified:2024-06-26
Method:X-RAY DIFFRACTION (1.459 Å)
Cite:The Chemokine, CCL20, and Its Receptor, CCR6, in the Pathogenesis and Treatment of Psoriasis and Psoriatic Arthritis
J Psoriasis Psoriatic Arthritis, 8, 2023
2IFS
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BU of 2ifs by Molmil
Structure of the N-WASP EVH1 domain in complex with an extended WIP peptide
Descriptor: Wiskott-Aldrich Syndrome Protein interacting protein and Neural Wiskott-Aldrich syndrome protein chimera
Authors:Volkman, B.F, Peterson, F.C, Deng, Q.
Deposit date:2006-09-21
Release date:2007-01-16
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Multiple WASP-interacting protein recognition motifs are required for a functional interaction with N-WASP.
J.Biol.Chem., 282, 2007
1JMJ
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Crystal Structure of Native Heparin Cofactor II
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, HEPARIN COFACTOR II, ...
Authors:Baglin, T.P, Carrell, R.W, Church, F.C, Huntington, J.A.
Deposit date:2001-07-18
Release date:2002-08-30
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Crystal structures of native and thrombin-complexed heparin cofactor II reveal a multistep allosteric mechanism.
Proc.Natl.Acad.Sci.USA, 99, 2002
6C44
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Zika virus capsid protein
Descriptor: Capsid protein
Authors:Morando, M.A, Barbosa, G.M, Cruz-Oliveira, C, Da Poian, A.T, Almeida, F.C.L.
Deposit date:2018-01-11
Release date:2019-01-16
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Dynamics of Zika Virus Capsid Protein in Solution: The Properties and Exposure of the Hydrophobic Cleft Are Controlled by the alpha-Helix 1 Sequence.
Biochemistry, 58, 2019
8B8V
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Crystal structure of the Rabies virus RNA free nucleoprotein- phosphoprotein complex
Descriptor: DI(HYDROXYETHYL)ETHER, Nucleoprotein, Phosphoprotein
Authors:Gerard, F.C.A, Jamin, M, Bourhis, J.M.
Deposit date:2022-10-05
Release date:2023-03-15
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure and Dynamics of the Unassembled Nucleoprotein of Rabies Virus in Complex with Its Phosphoprotein Chaperone Module.
Viruses, 14, 2022
6JFI
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The symmetric-reconstructed cryo-EM structure of Zika virus-FabZK2B10 complex
Descriptor: FabZK2B10 heavy chain, FabZK2B10 light chain, ZIKV structural protein E, ...
Authors:Wang, L, Wang, R.K, Wang, L, Ben, H.J, Yu, L, Gao, F, Shi, X.L, Yin, C.B, Zhang, F.C, Xiang, Y, Zhang, L.Q.
Deposit date:2019-02-08
Release date:2019-04-10
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (11 Å)
Cite:Structural Basis for Neutralization and Protection by a Zika Virus-Specific Human Antibody.
Cell Rep, 26, 2019
7PA5
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Complex between the beta-lactamase CMY-2 with an inhibitory nanobody
Descriptor: Beta-lactamase, GLYCEROL, PHOSPHATE ION, ...
Authors:Frederic Cawez, F.C, Frederic Kerff, F.K, Moreno Galleni, M.G, Raphael Herman, R.H.
Deposit date:2021-07-29
Release date:2022-11-16
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (3.184 Å)
Cite:Development of Nanobodies as Theranostic Agents against CMY-2-Like Class C beta-Lactamases.
Antimicrob.Agents Chemother., 67, 2023
3HI8
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BU of 3hi8 by Molmil
Crystal structure of proliferating cell nuclear antigen (PCNA) from Haloferax volcanii
Descriptor: Proliferating cell nuclear antigen PcnA
Authors:Morgunova, E, Gray, F.C, MacNeill, S.A, Ladenstein, R.
Deposit date:2009-05-19
Release date:2009-09-29
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3.202 Å)
Cite:Structural insights into the adaptation of proliferating cell nuclear antigen (PCNA) from Haloferax volcanii to a high-salt environment.
Acta Crystallogr.,Sect.D, 65, 2009
7RU7
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Crystal structure of BtrK, a decarboxylase involved in butirosin biosynthesis
Descriptor: DI(HYDROXYETHYL)ETHER, L-glutamyl-[BtrI acyl-carrier protein] decarboxylase, PYRIDOXAL-5'-PHOSPHATE
Authors:Arenas, L.A.R, Paiva, F.C.R, Huang, F, Leadlay, P, Dias, M.V.B.
Deposit date:2021-08-16
Release date:2022-08-17
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystal structure of BtrK, a decarboxylase involved in the (S)-4-amino-2-hydroxybutyrate (AHBA) formation during butirosin biosynthesis
J.Mol.Struct., 1267, 2022
7JH1
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Solution structure of a reconstructed XCL1 ancestor
Descriptor: XCL1 ancestor
Authors:Tyler, R.C, Peterson, F.C, Volkman, B.F.
Deposit date:2020-07-20
Release date:2020-12-30
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Evolution of fold switching in a metamorphic protein.
Science, 371, 2021
6S2P
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BU of 6s2p by Molmil
Structure of the NB-ARC domain from the Tomato immune receptor NRC1
Descriptor: ADENOSINE-5'-DIPHOSPHATE, NRC1
Authors:Steele, J.F.C, Banfield, M.J.
Deposit date:2019-06-21
Release date:2019-07-03
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural and biochemical studies of an NB-ARC domain from a plant NLR immune receptor.
Plos One, 14, 2019
5SZW
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BU of 5szw by Molmil
NMR solution structure of the RRM1 domain of the post-transcriptional regulator HuR
Descriptor: ELAV-like protein 1
Authors:Lixa, C, Mujo, A, Jendiroba, K.A, Almeida, F.C.L, Lima, L.M.T.R, Pinheiro, A.S.
Deposit date:2016-08-15
Release date:2017-09-06
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Oligomeric transition and dynamics of RNA binding by the HuR RRM1 domain in solution.
J. Biomol. NMR, 72, 2018
5I7Z
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BU of 5i7z by Molmil
Crystal structure of a Par-6 PDZ-Crumbs 3 C-terminal peptide complex
Descriptor: Crb-3, DI(HYDROXYETHYL)ETHER, LD29223p
Authors:Whitney, D.S, Peterson, F.C, Prehoda, K.E, Volkman, B.F.
Deposit date:2016-02-18
Release date:2016-03-16
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.801 Å)
Cite:Binding of Crumbs to the Par-6 CRIB-PDZ Module Is Regulated by Cdc42.
Biochemistry, 55, 2016
3QPZ
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BU of 3qpz by Molmil
Crystal structure of the N59A mutant of the 3-deoxy-d-manno-octulosonate 8-phosphate synthase (KDO8PS) from Neisseria meningitidis
Descriptor: 2-dehydro-3-deoxyphosphooctonate aldolase, CHLORIDE ION, GLYCEROL, ...
Authors:Allison, T.M, Jameson, G.B, Parker, E.J, Cochrane, F.C.
Deposit date:2011-02-14
Release date:2011-04-13
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Targeting the role of a key conserved motif for substrate selection and catalysis by 3-deoxy-D-manno-octulosonate 8-phosphate synthase
Biochemistry, 50, 2011
6SY4
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TetR in complex with the TetR-binding RNA-aptamer K1
Descriptor: TetR-binding aptamer K1 (43-MER), Tetracycline repressor protein class B from transposon Tn10
Authors:Grau, F.C, Muller, Y.A, Suess, B, Groher, F, Jaeger, J.
Deposit date:2019-09-27
Release date:2020-02-05
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.695 Å)
Cite:The complex formed between a synthetic RNA aptamer and the transcription repressor TetR is a structural and functional twin of the operator DNA-TetR regulator complex.
Nucleic Acids Res., 48, 2020
6YC6
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Structure of C. glutamicum GlnK
Descriptor: 1,2-ETHANEDIOL, PHOSPHATE ION, PII protein
Authors:Grau, F.C, Muller, Y.A.
Deposit date:2020-03-18
Release date:2021-03-24
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structures of adenylylated and unadenylylated P II protein GlnK from Corynebacterium glutamicum.
Acta Crystallogr D Struct Biol, 77, 2021
6YC7
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BU of 6yc7 by Molmil
Structure of adenylylated C. glutamicum GlnK
Descriptor: ADENINE ARABINOSE-5'-PHOSPHATE, ADENOSINE MONOPHOSPHATE, ADENOSINE-5'-DIPHOSPHATE, ...
Authors:Grau, F.C, Muller, Y.A.
Deposit date:2020-03-18
Release date:2021-03-24
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structures of adenylylated and unadenylylated P II protein GlnK from Corynebacterium glutamicum.
Acta Crystallogr D Struct Biol, 77, 2021
6SY6
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TetR in complex with the TetR-binding RNA-aptamer K2
Descriptor: RNA (36-MER), Tetracycline repressor protein class B from transposon Tn10
Authors:Grau, F.C, Muller, Y.A, Suess, B, Groher, F, Jaeger, J.
Deposit date:2019-09-27
Release date:2020-02-05
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:The complex formed between a synthetic RNA aptamer and the transcription repressor TetR is a structural and functional twin of the operator DNA-TetR regulator complex.
Nucleic Acids Res., 48, 2020
1DV5
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BU of 1dv5 by Molmil
TERTIARY STRUCTURE OF APO-D-ALANYL CARRIER PROTEIN
Descriptor: APO-D-ALANYL CARRIER PROTEIN
Authors:Volkman, B.F, Zhang, Q, Debabov, D.V, Rivera, E, Kresheck, G.C, Neuhaus, F.C.
Deposit date:2000-01-19
Release date:2001-08-01
Last modified:2024-04-10
Method:SOLUTION NMR
Cite:Biosynthesis of D-alanyl-lipoteichoic acid: the tertiary structure of apo-D-alanyl carrier protein.
Biochemistry, 40, 2001
1BVO
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BU of 1bvo by Molmil
DORSAL HOMOLOGUE GAMBIF1 BOUND TO DNA
Descriptor: DNA DUPLEX, TRANSCRIPTION FACTOR GAMBIF1
Authors:Cramer, P, Varrot, A, Barillas-Mury, C, Kafatos, F.C, Mueller, C.W.
Deposit date:1998-09-16
Release date:1999-07-12
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure of the specificity domain of the Dorsal homologue Gambif1 bound to DNA.
Structure Fold.Des., 7, 1999
4WWC
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Crystal structure of full length YvoA in complex with palindromic operator DNA
Descriptor: 1,2-ETHANEDIOL, DNA (5'-D(P*CP*AP*GP*TP*GP*GP*TP*CP*TP*AP*GP*AP*CP*CP*AP*CP*TP*GP*G)-3'), HTH-type transcriptional repressor YvoA
Authors:Grau, F.C, Fillenberg, S.B, Muller, Y.A.
Deposit date:2014-11-10
Release date:2015-01-14
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.903 Å)
Cite:Structural insight into operator dre-sites recognition and effector binding in the GntR/HutC transcription regulator NagR.
Nucleic Acids Res., 43, 2015
3CB7
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The crystallographic structure of the digestive lysozyme 2 from Musca domestica at 1.9 Ang.
Descriptor: ACETIC ACID, GLYCEROL, ISOPROPYL ALCOHOL, ...
Authors:Cancado, F.C, Valerio, A.A, Marana, S.R, Barbosa, J.A.R.G.
Deposit date:2008-02-21
Release date:2009-02-24
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The crystallographic structure of the digestive lysozyme 2 from Musca domestica at 1.9 Ang.
To be Published
4WVO
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An engineered PYR1 mandipropamid receptor in complex with mandipropamid and HAB1
Descriptor: (2S)-2-(4-chlorophenyl)-N-{2-[3-methoxy-4-(prop-2-yn-1-yloxy)phenyl]ethyl}-2-(prop-2-yn-1-yloxy)ethanamide, Abscisic acid receptor PYR1, MAGNESIUM ION, ...
Authors:Peterson, F.C, Volkman, B.F, Cutler, S.R.
Deposit date:2014-11-06
Release date:2015-02-11
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.251 Å)
Cite:Agrochemical control of plant water use using engineered abscisic acid receptors.
Nature, 520, 2015

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