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PDB: 228 results

6WBU
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BU of 6wbu by Molmil
Putative Peptidyl Prolyl cis-trans Isomerase FKBP12 from Mycobacterium tuberculosis
Descriptor: FKBP12 from Mycobacterium tuberculosis
Authors:Andrade, G.C, Silva, L.F.C, Almeida, F.C.L, AnoBom, C.D.
Deposit date:2020-03-27
Release date:2021-03-31
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structure and Biochemical Characterization of a Putative Peptidyl Prolyl cis-trans Isomerase FKBP12 from Mycobacterium tuberculosis
To Be Published
1T0Y
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BU of 1t0y by Molmil
Solution Structure of a Ubiquitin-Like Domain from Tubulin-binding Cofactor B
Descriptor: tubulin folding cofactor B
Authors:Lytle, B.L, Peterson, F.C, Qui, S.H, Luo, M, Volkman, B.F, Markley, J.L, Center for Eukaryotic Structural Genomics (CESG)
Deposit date:2004-04-13
Release date:2004-04-27
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution Structure of a Ubiquitin-like Domain from Tubulin-binding Cofactor B.
J.Biol.Chem., 279, 2004
6WUQ
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BU of 6wuq by Molmil
Crystal structure of AjiA1 in apo form
Descriptor: AjiA1, MAGNESIUM ION, ZINC ION
Authors:Paiva, F.C.R, Chan, K, Leadlay, P, Dias, M.V.B.
Deposit date:2020-05-05
Release date:2020-12-09
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.003 Å)
Cite:The crystal structure of AjiA1 reveals a novel structural motion mechanism in the adenylate-forming enzyme family
Acta Crystallogr.,Sect.D, 76, 2020
7XIV
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BU of 7xiv by Molmil
Structural insight into the interactions between Lloviu virus VP30 and nucleoprotein
Descriptor: Nucleocapsid protein,Minor nucleoprotein VP30
Authors:Dong, S.S, Qin, X.C, Sun, W.Y, Luan, F.C, Wang, J.J, Ma, L, Li, X.X, Yang, G.X, Hao, C.Y.
Deposit date:2022-04-14
Release date:2022-06-29
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.498 Å)
Cite:Structural insights into the interactions between lloviu virus VP30 and nucleoprotein.
Biochem.Biophys.Res.Commun., 616, 2022
1JMJ
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BU of 1jmj by Molmil
Crystal Structure of Native Heparin Cofactor II
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, HEPARIN COFACTOR II, ...
Authors:Baglin, T.P, Carrell, R.W, Church, F.C, Huntington, J.A.
Deposit date:2001-07-18
Release date:2002-08-30
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Crystal structures of native and thrombin-complexed heparin cofactor II reveal a multistep allosteric mechanism.
Proc.Natl.Acad.Sci.USA, 99, 2002
5KTF
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BU of 5ktf by Molmil
Structure of the C-terminal transmembrane domain of scavenger receptor BI (SR-BI)
Descriptor: Scavenger receptor class B member 1
Authors:Chadwick, A.C, Peterson, F.C, Volkman, B.F, Sahoo, D.
Deposit date:2016-07-11
Release date:2017-03-08
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:NMR Structure of the C-Terminal Transmembrane Domain of the HDL Receptor, SR-BI, and a Functionally Relevant Leucine Zipper Motif.
Structure, 25, 2017
8B8V
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BU of 8b8v by Molmil
Crystal structure of the Rabies virus RNA free nucleoprotein- phosphoprotein complex
Descriptor: DI(HYDROXYETHYL)ETHER, Nucleoprotein, Phosphoprotein
Authors:Gerard, F.C.A, Jamin, M, Bourhis, J.M.
Deposit date:2022-10-05
Release date:2023-03-15
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure and Dynamics of the Unassembled Nucleoprotein of Rabies Virus in Complex with Its Phosphoprotein Chaperone Module.
Viruses, 14, 2022
7PA5
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BU of 7pa5 by Molmil
Complex between the beta-lactamase CMY-2 with an inhibitory nanobody
Descriptor: Beta-lactamase, GLYCEROL, PHOSPHATE ION, ...
Authors:Frederic Cawez, F.C, Frederic Kerff, F.K, Moreno Galleni, M.G, Raphael Herman, R.H.
Deposit date:2021-07-29
Release date:2022-11-16
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (3.184 Å)
Cite:Development of Nanobodies as Theranostic Agents against CMY-2-Like Class C beta-Lactamases.
Antimicrob.Agents Chemother., 67, 2023
7JH1
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BU of 7jh1 by Molmil
Solution structure of a reconstructed XCL1 ancestor
Descriptor: XCL1 ancestor
Authors:Tyler, R.C, Peterson, F.C, Volkman, B.F.
Deposit date:2020-07-20
Release date:2020-12-30
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Evolution of fold switching in a metamorphic protein.
Science, 371, 2021
5WKA
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BU of 5wka by Molmil
Crystal structure of a GH1 beta-glucosidase retrieved from microbial metagenome of Poraque Amazon lake
Descriptor: Beta-glucosidase, DI(HYDROXYETHYL)ETHER, GLYCEROL
Authors:Morais, M.A.B, Toyama, D, Ramos, F.C, Zanphorlin, L.M, Tonoli, C.C.C, Miranda, F.P, Ruller, R, Henrique-Silva, F, Murakami, M.T.
Deposit date:2017-07-24
Release date:2018-03-07
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:A novel beta-glucosidase isolated from the microbial metagenome of Lake Poraque (Amazon, Brazil).
Biochim. Biophys. Acta, 1866, 2018
7RU7
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BU of 7ru7 by Molmil
Crystal structure of BtrK, a decarboxylase involved in butirosin biosynthesis
Descriptor: DI(HYDROXYETHYL)ETHER, L-glutamyl-[BtrI acyl-carrier protein] decarboxylase, PYRIDOXAL-5'-PHOSPHATE
Authors:Arenas, L.A.R, Paiva, F.C.R, Huang, F, Leadlay, P, Dias, M.V.B.
Deposit date:2021-08-16
Release date:2022-08-17
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystal structure of BtrK, a decarboxylase involved in the (S)-4-amino-2-hydroxybutyrate (AHBA) formation during butirosin biosynthesis
J.Mol.Struct., 1267, 2022
3HI8
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BU of 3hi8 by Molmil
Crystal structure of proliferating cell nuclear antigen (PCNA) from Haloferax volcanii
Descriptor: Proliferating cell nuclear antigen PcnA
Authors:Morgunova, E, Gray, F.C, MacNeill, S.A, Ladenstein, R.
Deposit date:2009-05-19
Release date:2009-09-29
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3.202 Å)
Cite:Structural insights into the adaptation of proliferating cell nuclear antigen (PCNA) from Haloferax volcanii to a high-salt environment.
Acta Crystallogr.,Sect.D, 65, 2009
2I9H
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BU of 2i9h by Molmil
NMR solution structure of the reduced form of thioredoxin 1 from yeast (Trx1)
Descriptor: Thioredoxin I
Authors:Pinheiro, A.S, Amorim, G.C, Almeida, F.C.L, Valente, A.P.
Deposit date:2006-09-05
Release date:2007-07-17
Last modified:2024-05-08
Method:SOLUTION NMR
Cite:NMR solution structure of the reduced form of thioredoxin 1 from Sacharomyces cerevisiae
Proteins, 70, 2008
4WWC
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BU of 4wwc by Molmil
Crystal structure of full length YvoA in complex with palindromic operator DNA
Descriptor: 1,2-ETHANEDIOL, DNA (5'-D(P*CP*AP*GP*TP*GP*GP*TP*CP*TP*AP*GP*AP*CP*CP*AP*CP*TP*GP*G)-3'), HTH-type transcriptional repressor YvoA
Authors:Grau, F.C, Fillenberg, S.B, Muller, Y.A.
Deposit date:2014-11-10
Release date:2015-01-14
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.903 Å)
Cite:Structural insight into operator dre-sites recognition and effector binding in the GntR/HutC transcription regulator NagR.
Nucleic Acids Res., 43, 2015
2IFS
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BU of 2ifs by Molmil
Structure of the N-WASP EVH1 domain in complex with an extended WIP peptide
Descriptor: Wiskott-Aldrich Syndrome Protein interacting protein and Neural Wiskott-Aldrich syndrome protein chimera
Authors:Volkman, B.F, Peterson, F.C, Deng, Q.
Deposit date:2006-09-21
Release date:2007-01-16
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Multiple WASP-interacting protein recognition motifs are required for a functional interaction with N-WASP.
J.Biol.Chem., 282, 2007
6VK2
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BU of 6vk2 by Molmil
NMR solution structure of Grb2-SH2 domain at pH 7
Descriptor: Growth factor receptor-bound protein 2
Authors:Sanches, K, Caruso, I.P, Melo, F.A, Almeida, F.C.L.
Deposit date:2020-01-18
Release date:2020-07-29
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:The dynamics of free and phosphopeptide-bound Grb2-SH2 reveals two dynamically independent subdomains and an encounter complex with fuzzy interactions.
Sci Rep, 10, 2020
4WVO
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BU of 4wvo by Molmil
An engineered PYR1 mandipropamid receptor in complex with mandipropamid and HAB1
Descriptor: (2S)-2-(4-chlorophenyl)-N-{2-[3-methoxy-4-(prop-2-yn-1-yloxy)phenyl]ethyl}-2-(prop-2-yn-1-yloxy)ethanamide, Abscisic acid receptor PYR1, MAGNESIUM ION, ...
Authors:Peterson, F.C, Volkman, B.F, Cutler, S.R.
Deposit date:2014-11-06
Release date:2015-02-11
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.251 Å)
Cite:Agrochemical control of plant water use using engineered abscisic acid receptors.
Nature, 520, 2015
3CB7
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BU of 3cb7 by Molmil
The crystallographic structure of the digestive lysozyme 2 from Musca domestica at 1.9 Ang.
Descriptor: ACETIC ACID, GLYCEROL, ISOPROPYL ALCOHOL, ...
Authors:Cancado, F.C, Valerio, A.A, Marana, S.R, Barbosa, J.A.R.G.
Deposit date:2008-02-21
Release date:2009-02-24
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The crystallographic structure of the digestive lysozyme 2 from Musca domestica at 1.9 Ang.
To be Published
5I7Z
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BU of 5i7z by Molmil
Crystal structure of a Par-6 PDZ-Crumbs 3 C-terminal peptide complex
Descriptor: Crb-3, DI(HYDROXYETHYL)ETHER, LD29223p
Authors:Whitney, D.S, Peterson, F.C, Prehoda, K.E, Volkman, B.F.
Deposit date:2016-02-18
Release date:2016-03-16
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.801 Å)
Cite:Binding of Crumbs to the Par-6 CRIB-PDZ Module Is Regulated by Cdc42.
Biochemistry, 55, 2016
5SZW
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BU of 5szw by Molmil
NMR solution structure of the RRM1 domain of the post-transcriptional regulator HuR
Descriptor: ELAV-like protein 1
Authors:Lixa, C, Mujo, A, Jendiroba, K.A, Almeida, F.C.L, Lima, L.M.T.R, Pinheiro, A.S.
Deposit date:2016-08-15
Release date:2017-09-06
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Oligomeric transition and dynamics of RNA binding by the HuR RRM1 domain in solution.
J. Biomol. NMR, 72, 2018
6S2P
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BU of 6s2p by Molmil
Structure of the NB-ARC domain from the Tomato immune receptor NRC1
Descriptor: ADENOSINE-5'-DIPHOSPHATE, NRC1
Authors:Steele, J.F.C, Banfield, M.J.
Deposit date:2019-06-21
Release date:2019-07-03
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural and biochemical studies of an NB-ARC domain from a plant NLR immune receptor.
Plos One, 14, 2019
5JNE
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BU of 5jne by Molmil
E2-SUMO-Siz1 E3-SUMO-PCNA complex
Descriptor: E3 SUMO-protein ligase SIZ1,Ubiquitin-like protein SMT3, GLYCEROL, Proliferating cell nuclear antigen, ...
Authors:Lima, C.D, Streich Jr, F.C.
Deposit date:2016-04-29
Release date:2016-08-10
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Capturing a substrate in an activated RING E3/E2-SUMO complex.
Nature, 536, 2016
8EOD
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BU of 8eod by Molmil
EEVD:Sis1-81 (J domain) bound conformation
Descriptor: Protein SIS1
Authors:Matos, C.O, Pinheiro, G.M.S, Ramos, C.H.I, Almeida, F.C.L.
Deposit date:2022-10-03
Release date:2023-10-18
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural and dynamical basis for the interaction of HSP70-EEVD with JDP Sis1
To Be Published
8EY0
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BU of 8ey0 by Molmil
Structure of an orthogonal PYR1*:HAB1* chemical-induced dimerization module in complex with mandipropamid
Descriptor: (2S)-2-(4-chlorophenyl)-N-{2-[3-methoxy-4-(prop-2-yn-1-yloxy)phenyl]ethyl}-2-(prop-2-yn-1-yloxy)ethanamide, Abscisic acid receptor PYR1, GLYCEROL, ...
Authors:Park, S.-Y, Volkman, B.F, Cutler, S.R, Peterson, F.C.
Deposit date:2022-10-26
Release date:2023-11-08
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:An orthogonalized PYR1-based CID module with reprogrammable ligand-binding specificity.
Nat.Chem.Biol., 20, 2024
6SY4
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BU of 6sy4 by Molmil
TetR in complex with the TetR-binding RNA-aptamer K1
Descriptor: TetR-binding aptamer K1 (43-MER), Tetracycline repressor protein class B from transposon Tn10
Authors:Grau, F.C, Muller, Y.A, Suess, B, Groher, F, Jaeger, J.
Deposit date:2019-09-27
Release date:2020-02-05
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.695 Å)
Cite:The complex formed between a synthetic RNA aptamer and the transcription repressor TetR is a structural and functional twin of the operator DNA-TetR regulator complex.
Nucleic Acids Res., 48, 2020

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