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PDB: 22271 results

2KAP
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BU of 2kap by Molmil
Solution structure of DLC1-SAM
Descriptor: Rho GTPase-activating protein 7
Authors:Yang, S, Yang, D.
Deposit date:2008-11-12
Release date:2009-10-20
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Characterization of DLC1-SAM equilibrium unfolding at the amino acid residue level
Biochemistry, 48, 2009
2KKA
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BU of 2kka by Molmil
Human telomere DNA two-tetrad quadruplex structure in K+ solution
Descriptor: 5'-D(*AP*GP*GP*GP*TP*TP*AP*GP*GP*GP*TP*TP*AP*IP*GP*GP*TP*TP*AP*GP*GP*GP*T)-3'
Authors:Zhang, Z, Dai, J, Yang, D.
Deposit date:2009-06-16
Release date:2009-12-15
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structure of a two-G-tetrad intramolecular G-quadruplex formed by a variant human telomeric sequence in K+ solution: insights into the interconversion of human telomeric G-quadruplex structures.
Nucleic Acids Res., 38, 2010
4M5L
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BU of 4m5l by Molmil
The Identification, Analysis and Structure-Based Development of Novel Inhibitors of 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase
Descriptor: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase, 2-amino-8-{[2-(2-methylphenyl)-2-oxoethyl]sulfanyl}-1,7-dihydro-6H-purin-6-one, CALCIUM ION, ...
Authors:Yun, M, Hoagland, D, Kumar, G, Waddell, B, Rock, C.O, Lee, R.E, White, S.W.
Deposit date:2013-08-08
Release date:2014-04-02
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.094 Å)
Cite:The identification, analysis and structure-based development of novel inhibitors of 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase.
Bioorg.Med.Chem., 22, 2014
4M5V
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BU of 4m5v by Molmil
Influenza 2009 H1N1 endonuclease with 100 millimolar calcium
Descriptor: CALCIUM ION, Polymerase PA, SULFATE ION
Authors:Bauman, J.D, Patel, D, Das, K, Arnold, E.
Deposit date:2013-08-08
Release date:2013-09-18
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystallographic fragment screening and structure-based optimization yields a new class of influenza endonuclease inhibitors.
Acs Chem.Biol., 8, 2013
2KEL
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BU of 2kel by Molmil
Structure of the transcription regulator SvtR from the hyperthermophilic archaeal virus SIRV1
Descriptor: Uncharacterized protein 56B
Authors:Guilliere, F, Kessler, A, Peixeiro, N, Sezonov, G, Prangishvili, D, Delepierre, M, Guijarro, J.I.
Deposit date:2009-01-30
Release date:2009-06-16
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structure, function, and targets of the transcriptional regulator SvtR from the hyperthermophilic archaeal virus SIRV1.
J.Biol.Chem., 284, 2009
2KBF
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BU of 2kbf by Molmil
solution structure of carboxyl-terminal domain of Dbp5p
Descriptor: ATP-dependent RNA helicase DBP5
Authors:Fan, J.S, Zhang, J, Yang, D.
Deposit date:2008-11-28
Release date:2009-10-13
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution and crystal structures of mRNA exporter Dbp5p and its interaction with nucleotides.
J.Mol.Biol., 388, 2009
2KG4
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BU of 2kg4 by Molmil
Three-dimensional structure of human Gadd45alpha in solution by NMR
Descriptor: Growth arrest and DNA-damage-inducible protein GADD45 alpha
Authors:Sanchez, R, Pantoja-Uceda, D, Prieto, J, Diercks, T, Campos-Olivas, R, Blanco, F.J.
Deposit date:2009-03-04
Release date:2009-03-31
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution structure of human growth arrest and DNA damage 45alpha (Gadd45alpha) and its interactions with proliferating cell nuclear antigen (PCNA) and Aurora A kinase
J.Biol.Chem., 285, 2010
4LT7
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BU of 4lt7 by Molmil
Crystal structure of the c2a domain of rabphilin-3a in complex with a calcium
Descriptor: CALCIUM ION, Rabphilin-3A
Authors:Verdaguer, N, Ferrer-Orta, C, Buxaderas, M, Corbalan-Garcia, S, Perez-Sanchez, D, Guerrero-Valero, M, Luengo, G, Pous, J, Guerra, P, Gomez-Fernandez, J.C, Guillen, J.
Deposit date:2013-07-23
Release date:2013-12-11
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural insights into the Ca2+ and PI(4,5)P2 binding modes of the C2 domains of rabphilin 3A and synaptotagmin 1.
Proc.Natl.Acad.Sci.USA, 110, 2013
2K65
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BU of 2k65 by Molmil
NMR solution structure of the exon/intron binding site 1 (EBS1/IBS1) of the group II intron Sc.ai5(gamma)
Descriptor: 5'-R(*CP*AP*GP*UP*GP*UP*C)-3', 5'-R(*GP*GP*CP*AP*CP*UP*G)-3'
Authors:Kruschel, D, Sigel, R.K.O.
Deposit date:2008-07-04
Release date:2009-07-14
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the 5'-splice site of a group II intron ribozyme
To be Published
4LVA
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BU of 4lva by Molmil
Fragment-based Identification of Amides Derived From trans-2-(Pyridin-3-yl)cyclopropanecarboxylic Acid as Potent Inhibitors of Human Nicotinamide Phosphoribosyltransferase (NAMPT)
Descriptor: 1,2-ETHANEDIOL, N-(4-{[4-(pyrrolidin-1-yl)piperidin-1-yl]sulfonyl}benzyl)-2H-pyrido[4,3-e][1,2,4]thiadiazin-3-amine 1,1-dioxide, Nicotinamide phosphoribosyltransferase, ...
Authors:Giannetti, A.M, Zheng, X, Skelton, N, Wang, W, Bravo, B, Feng, Y, Gunzner-Toste, J, Ho, Y, Hua, R, Wang, C, Zhao, Q, Liederer, B.M, Liu, Y, O'Brien, T, Oeh, J, Sampath, D, Shen, Y, Wang, L, Wu, H, Xiao, Y, Yuen, P, Zak, M, Zhao, G, Dragovich, P.S.
Deposit date:2013-07-26
Release date:2013-09-25
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Identification of amides derived from 1H-pyrazolo[3,4-b]pyridine-5-carboxylic acid as potent inhibitors of human nicotinamide phosphoribosyltransferase (NAMPT).
Bioorg.Med.Chem.Lett., 23, 2013
2K71
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BU of 2k71 by Molmil
Structure and dynamics of a DNA GNRA hairpin solved vy high-sensitivity NMR with two independent converging methods, simulated annealing (DYANA) and mesoscopic molecular modelling (BCE/AMBER)
Descriptor: 5'-D(*DGP*DCP*DGP*DAP*DAP*DAP*DGP*DC)-3'
Authors:Santini, G.P.H, Cognet, J.A.H, Xu, D, Singarapu, K.K, Herve du Penhoat, C.L.M.
Deposit date:2008-07-29
Release date:2009-07-21
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Nucleic acid folding determined by mesoscale modeling and NMR spectroscopy: solution structure of d(GCGAAAGC).
J.Phys.Chem.B, 113, 2009
4LYI
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BU of 4lyi by Molmil
Crystal Structure of apo-BRD4(1)
Descriptor: 1,2-ETHANEDIOL, Bromodomain-containing protein 4, IODIDE ION, ...
Authors:Wohlwend, D.
Deposit date:2013-07-31
Release date:2014-01-15
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:4-Acyl pyrroles: mimicking acetylated lysines in histone code reading.
Angew.Chem.Int.Ed.Engl., 52, 2013
4LZP
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BU of 4lzp by Molmil
Structure of the TIR domain of the immunosuppressor BtpA from Brucella
Descriptor: Putative uncharacterized protein
Authors:Kaplan-turkoz, B, O'callaghan, D, Vergunst, A, Terradot, L.
Deposit date:2013-08-01
Release date:2013-11-06
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:Structure of the Toll/interleukin 1 receptor (TIR) domain of the immunosuppressive Brucella effector BtpA/Btp1/TcpB
Febs Lett., 587, 2013
2KL6
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BU of 2kl6 by Molmil
Solution NMR structure of the CARDB domain of PF1109 from Pyrococcus furiosus. Northeast Structural Genomics Consortium target PfR193A
Descriptor: Uncharacterized protein
Authors:Aramini, J.M, Lee, D, Ciccosanti, C, Hamilton, K, Nair, R, Rost, B, Acton, T.B, Xiao, R, Swapna, G.V.T, Everett, J.K, Montelione, G.T, Northeast Structural Genomics Consortium (NESG)
Deposit date:2009-06-30
Release date:2009-08-25
Last modified:2024-05-08
Method:SOLUTION NMR
Cite:Solution NMR structure of the CARDB domain of PF1109 from Pyrococcus furiosus. Northeast Structural Genomics Consortium target PfR193A
To be Published
4M1A
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BU of 4m1a by Molmil
Crystal structure of a Domain of unknown function (DUF1904) from Sebaldella termitidis ATCC 33386
Descriptor: Hypothetical protein
Authors:Kumaran, D, Chamala, S, Evans, B, Foti, R, Gizzi, A, Hillerich, B, Kar, A, Lafleur, J, Seidel, R, Villigas, G, Zencheck, W, Al Obaidi, N, Almo, S.C, Swaminathan, S, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2013-08-02
Release date:2013-08-14
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of a Domain of unknown function (DUF1904) from Sebaldellatermitidis ATCC 33386
To be Published
2KDF
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BU of 2kdf by Molmil
NMR structure of minor S5a (196-306):K48 linked diubiquitin species
Descriptor: 26S proteasome non-ATPase regulatory subunit 4, Ubiquitin
Authors:Zhang, N, Wang, Q, Ehlinger, A, Randles, L, Lary, J.W, Kang, Y, Haririnia, A, Cole, J.L, Fushman, D, Walters, K.J.
Deposit date:2009-01-06
Release date:2009-09-01
Last modified:2022-03-16
Method:SOLUTION NMR
Cite:Structure of the s5a:k48-linked diubiquitin complex and its interactions with rpn13.
Mol.Cell, 35, 2009
2K5N
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BU of 2k5n by Molmil
Solution NMR Structure of the N-Terminal Domain of Protein ECA1580 from Erwinia carotovora, Northeast Structural Genomics Consortium Target EwR156A
Descriptor: Putative cold-shock protein
Authors:Mills, J.L, Eletsky, A, Zhang, Q, Lee, D, Jiang, M, Ciccosanti, C, Xiao, R, Lui, J, Everett, J.K, Swapna, G.V.T, Acton, T.B, Rost, B, Montelione, G.T, Szyperski, T, Northeast Structural Genomics Consortium (NESG)
Deposit date:2008-06-30
Release date:2008-08-19
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:NMR Structure of the Putative Cold Shock Protein from Erwinia carotovora: Northeast Structural Genomics Consortium Target EwR156a
To be Published
2K7H
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BU of 2k7h by Molmil
NMR solution structure of soybean allergen Gly m 4
Descriptor: Stress-induced protein SAM22
Authors:Berkner, H, Neudecker, P, Mittag, D, Ballmer-Weber, B.K, Schweimer, K, Vieths, S, Roesch, P.
Deposit date:2008-08-11
Release date:2009-05-05
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Cross-reactivity of pollen and food allergens: soybean Gly m 4 is a member of the Bet v 1 superfamily and closely resembles yellow lupine proteins
Biosci.Rep., 29, 2009
4MCW
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BU of 4mcw by Molmil
Crystal structure of a HD-GYP domain (a cyclic-di-GMP phosphodiesterase) containing a tri-nuclear metal centre
Descriptor: 1,2-ETHANEDIOL, FE (III) ION, IMIDAZOLE, ...
Authors:Bellini, D, Walsh, M.A, Oxford Protein Production Facility (OPPF)
Deposit date:2013-08-21
Release date:2014-02-19
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Crystal structure of an HD-GYP domain cyclic-di-GMP phosphodiesterase reveals an enzyme with a novel trinuclear catalytic iron centre.
Mol.Microbiol., 91, 2014
2KJD
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BU of 2kjd by Molmil
Solution structure of extended PDZ2 domain from NHERF1 (150-270)
Descriptor: Sodium/hydrogen exchange regulatory cofactor NHE-RF1
Authors:Bhattacharya, S, Cowburn, D, Bu, Z.
Deposit date:2009-05-27
Release date:2009-12-29
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:A dynamic intramolecular conformational switch autoregulates the scaffolding protein NHERF1
To be Published
2KMO
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BU of 2kmo by Molmil
Solution structure of native Leech-derived tryptase inhibitor, LDTI
Descriptor: Leech-derived tryptase inhibitor C
Authors:Pantoja-Uceda, D, Santoro, J.
Deposit date:2009-08-03
Release date:2009-11-10
Last modified:2011-08-10
Method:SOLUTION NMR
Cite:Deciphering the structural basis that guides the oxidative folding of leech-derived tryptase inhibitor.
J.Biol.Chem., 284, 2009
4MM1
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BU of 4mm1 by Molmil
GGGPS from Methanothermobacter thermautotrophicus
Descriptor: Geranylgeranylglyceryl phosphate synthase, SN-GLYCEROL-1-PHOSPHATE, TRIETHYLENE GLYCOL
Authors:Rajendran, C, Peterhoff, D, Beer, B, Kumpula, E.P, Kapetaniou, E, Guldan, H, Wierenga, R.K, Sterner, R, Babinger, P.
Deposit date:2013-09-07
Release date:2014-06-25
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.8004 Å)
Cite:A comprehensive analysis of the geranylgeranylglyceryl phosphate synthase enzyme family identifies novel members and reveals mechanisms of substrate specificity and quaternary structure organization.
Mol.Microbiol., 92, 2014
4MN9
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BU of 4mn9 by Molmil
Fifteen minutes iron loaded frog M ferritin mutant H54Q
Descriptor: CHLORIDE ION, FE (III) ION, Ferritin, ...
Authors:Mangani, S, Di Pisa, F, Pozzi, C, Turano, P, Lalli, D.
Deposit date:2013-09-10
Release date:2014-10-08
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Time-lapse anomalous X-ray diffraction shows how Fe(2+) substrate ions move through ferritin protein nanocages to oxidoreductase sites.
Acta Crystallogr.,Sect.D, 71, 2015
4MOL
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BU of 4mol by Molmil
Pyranose 2-oxidase H167A mutant with 2-fluorinated galactose
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 2-deoxy-2-fluoro-beta-D-galactopyranose, DODECAETHYLENE GLYCOL, ...
Authors:Tan, T.C, Spadiut, O, Gandini, R, Haltrich, D, Divne, C.
Deposit date:2013-09-12
Release date:2014-02-05
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Basis for Binding of Fluorinated Glucose and Galactose to Trametes multicolor Pyranose 2-Oxidase Variants with Improved Galactose Conversion.
Plos One, 9, 2014
4MKU
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BU of 4mku by Molmil
Frog M ferritin mutant H54Q
Descriptor: CHLORIDE ION, Ferritin, middle subunit, ...
Authors:Mangani, S, Di Pisa, F, Pozzi, C, Turano, P, Lalli, D.
Deposit date:2013-09-05
Release date:2014-09-10
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Time-lapse anomalous X-ray diffraction shows how Fe(2+) substrate ions move through ferritin protein nanocages to oxidoreductase sites.
Acta Crystallogr.,Sect.D, 71, 2015

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