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PDB: 200 results

2AFA
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BU of 2afa by Molmil
Crystal Structure of putative NAG isomerase from Salmonella typhimurium
Descriptor: NAG isomerase
Authors:Kumaran, D, Swaminathan, S, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2005-07-25
Release date:2005-08-16
Last modified:2021-02-03
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystal Structure of putative NAG isomerase from Salmonella typhimurium
To be Published
4LKB
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BU of 4lkb by Molmil
Crystal structure of a putative 4-Oxalocrotonate Tautomerase from Nostoc sp. PCC 7120
Descriptor: GLYCEROL, SULFATE ION, hypothetical protein alr4568/putative 4-Oxalocrotonate Tautomerase
Authors:Kumaran, D, Chamala, S, Evans, B, Foti, R, Gizzi, A, Hillerich, B, Kar, A, Lafleur, J, Seidel, R, Villigas, G, Zencheck, W, Al Obaidi, N, Almo, S.C, Swaminathan, S, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2013-07-07
Release date:2013-07-24
Method:X-RAY DIFFRACTION (2.16 Å)
Cite:Crystal structure of a putative 4-Oxalocrotonate Tautomerase from Nostoc sp. PCC 7120
To be Published
4LK5
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BU of 4lk5 by Molmil
Crystal structure of a enoyl-CoA hydratase from Mycobacterium avium subsp. paratuberculosis K-10
Descriptor: enoyl-CoA hydratase
Authors:Kumaran, D, Chamala, S, Evans, B, Foti, R, Gizzi, A, Hillerich, B, Kar, A, Lafleur, J, Seidel, R, Villigas, G, Zencheck, W, Al Obaidi, N, Almo, S.C, Swaminathan, S, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2013-07-06
Release date:2013-07-24
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of a enoyl-CoA hydratase from Mycobacterium avium subsp. paratuberculosis K-10
To be Published
8GDW
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BU of 8gdw by Molmil
Crystal structure of Domain Related to Iron (DRI) from cyanobacteria
Descriptor: Ssr1698 protein, ZINC ION
Authors:Kumaran, D, Grosjean, N, Blaby, E.C.
Deposit date:2023-03-06
Release date:2024-03-13
Last modified:2024-04-24
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:A hemoprotein with a zinc-mirror heme site ties heme availability to carbon metabolism in cyanobacteria.
Nat Commun, 15, 2024
8GF4
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BU of 8gf4 by Molmil
Crystal structure of Domain Related to Iron (DRI) in complex with heme
Descriptor: PROTOPORPHYRIN IX CONTAINING FE, Ssr1698 protein, ZINC ION
Authors:Kumaran, D, Blaby, E.C.
Deposit date:2023-03-07
Release date:2024-03-13
Last modified:2024-04-24
Method:X-RAY DIFFRACTION (3 Å)
Cite:A hemoprotein with a zinc-mirror heme site ties heme availability to carbon metabolism in cyanobacteria.
Nat Commun, 15, 2024
3BGA
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BU of 3bga by Molmil
Crystal structure of beta-galactosidase from Bacteroides thetaiotaomicron VPI-5482
Descriptor: Beta-galactosidase, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Kumaran, D, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2007-11-26
Release date:2007-12-11
Last modified:2021-02-03
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure analysis of beta-galactosidase from Bacteroides thetaiotaomicron VPI-5482.
To be Published
3C8A
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BU of 3c8a by Molmil
Crystal structure of the catalytic domain of botulinum neurotoxin serotype A with inhibitory peptide RRGL
Descriptor: Botulinum neurotoxin A light chain, Inhibitor peptide RRGL, SULFATE ION, ...
Authors:Kumaran, D, Swaminathan, S.
Deposit date:2008-02-11
Release date:2008-04-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.52 Å)
Cite:Structure- and Substrate-based Inhibitor Design for Clostridium botulinum Neurotoxin Serotype A
J.Biol.Chem., 283, 2008
1NJR
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BU of 1njr by Molmil
Crystal structure of yeast ymx7, an ADP-ribose-1''-monophosphatase
Descriptor: 32.1 kDa protein in ADH3-RCA1 intergenic region, Xylitol
Authors:Kumaran, D, Eswaramoorthy, S, Studier, F.W, Swaminathan, S, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2003-01-02
Release date:2004-08-17
Last modified:2021-02-03
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure and mechanism of ADP-ribose-1''-monophosphatase (Appr-1''-pase), a ubiquitous cellular processing enzyme
Protein Sci., 14, 2005
2QS8
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BU of 2qs8 by Molmil
Crystal structure of a Xaa-Pro dipeptidase with bound methionine in the active site
Descriptor: MAGNESIUM ION, METHIONINE, Xaa-Pro Dipeptidase
Authors:Kumaran, D, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2007-07-30
Release date:2007-08-21
Last modified:2021-02-03
Method:X-RAY DIFFRACTION (2.33 Å)
Cite:Functional annotation of two new carboxypeptidases from the amidohydrolase superfamily of enzymes.
Biochemistry, 48, 2009
3BBL
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BU of 3bbl by Molmil
Crystal structure of a regulatory protein of LacI family from Chloroflexus aggregans
Descriptor: 1,2-ETHANEDIOL, Regulatory protein of LacI family
Authors:Kumaran, D, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2007-11-09
Release date:2007-11-27
Last modified:2021-02-03
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Crystal structure of a regulatory protein of LacI family from the Chloroflexus aggregans.
To be Published
7K40
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BU of 7k40 by Molmil
Crystal Structure of SARS-CoV-2 Main Protease (3CLpro/Mpro) in Complex with Covalent Inhibitor Boceprevir at 1.35 A Resolution
Descriptor: 3C-like proteinase, DIMETHYL SULFOXIDE, boceprevir (bound form)
Authors:Kumaran, D, Andi, B, Kreitler, D.F, Soares, A.S, Shi, W, Jakoncic, J, Fuchs, M.R, Keereetaweep, J, Shanklin, J, McSweeney, S.
Deposit date:2020-09-14
Release date:2020-09-23
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Hepatitis C virus NS3/4A inhibitors and other drug-like compounds as covalent binders of SARS-CoV-2 main protease.
Sci Rep, 12, 2022
1I4P
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BU of 1i4p by Molmil
CRYSTAL STRUCTURE OF STAPHYLOCOCCAL ENTEROTOXIN C2 AT 100K CRYSTALLIZED AT PH 5.5
Descriptor: ENTEROTOXIN TYPE C-2, ZINC ION
Authors:Kumaran, D, Swaminathan, S.
Deposit date:2001-02-22
Release date:2001-03-14
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of staphylococcal enterotoxin C2 at various pH levels.
Acta Crystallogr.,Sect.D, 57, 2001
1I4R
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BU of 1i4r by Molmil
CRYSTAL STRUCTURE OF STAPHYLOCOCCAL ENTEROTOXIN C2 AT 100K CRYSTALLIZED AT PH 6.5
Descriptor: ENTEROTOXIN TYPE C-2, ZINC ION
Authors:Kumaran, D, Swaminathan, S.
Deposit date:2001-02-22
Release date:2001-03-14
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure of staphylococcal enterotoxin C2 at various pH levels.
Acta Crystallogr.,Sect.D, 57, 2001
1I4Q
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BU of 1i4q by Molmil
CRYSTAL STRUCTURE OF STAPHYLOCOCCAL ENTEROTOXIN C2 AT 100K CRYSTALLIZED AT PH 6.0
Descriptor: ENTEROTOXIN TYPE C-2, ZINC ION
Authors:Kumaran, D, Swaminathan, S.
Deposit date:2001-02-22
Release date:2001-03-14
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of staphylococcal enterotoxin C2 at various pH levels.
Acta Crystallogr.,Sect.D, 57, 2001
4E3Z
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BU of 4e3z by Molmil
Crystal Structure of a oxidoreductase from Rhizobium etli CFN 42
Descriptor: Putative oxidoreductase protein
Authors:Kumaran, D, Chamala, S, Evans, B, Foti, R, Gizzi, A, Hillerich, B, Kar, A, Lafleur, J, Seidel, R, Villigas, G, Zencheck, W, Almo, S.C, Swaminathan, S, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2012-03-11
Release date:2012-03-21
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structure of a oxidoreductase from Rhizobium etli CFN 42
To be Published
4ZJX
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BU of 4zjx by Molmil
Crystal structure of the catalytic domain of botulinum neurotoxin serotype A with a Novel Cyclic Peptide Inhibitor
Descriptor: Botulinum neurotoxin type A, SULFATE ION, ZINC ION, ...
Authors:Kumaran, D, Swaminathan, S.
Deposit date:2015-04-29
Release date:2016-06-01
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Crystal structure of the catalytic domain of botulinum neurotoxin serotype A with a Novel Cyclic Peptide Inhibitor
To Be Published
4DUP
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BU of 4dup by Molmil
Crystal Structure of a quinone oxidoreductase from Rhizobium etli CFN 42
Descriptor: quinone oxidoreductase
Authors:Kumaran, D, Rice, S, Evans, B, Foti, R, Gizzi, A, Hillerich, B, Kar, A, Lafleur, J, Seidel, R, Villigas, G, Zencheck, W, Almo, S.C, Swaminathan, S, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2012-02-22
Release date:2012-03-07
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Crystal Structure of a quinone oxidoreductase from Rhizobium etli CFN 42
To be Published
1F1M
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BU of 1f1m by Molmil
CRYSTAL STRUCTURE OF OUTER SURFACE PROTEIN C (OSPC)
Descriptor: OUTER SURFACE PROTEIN C, ZINC ION
Authors:Kumaran, D, Eswaramoorthy, S, Dunn, J.J, Swaminathan, S.
Deposit date:2000-05-19
Release date:2001-04-04
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of outer surface protein C (OspC) from the Lyme disease spirochete, Borrelia burgdorferi.
EMBO J., 20, 2001
1CQV
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BU of 1cqv by Molmil
CRYSTAL STRUCTURE OF STAPHYLOCOCCAL ENTEROTOXIN C2 AT 100K CRYSTALLIZED AT PH 5.0
Descriptor: PROTEIN (STAPHYLOCOCCAL ENTEROTOXIN C2), ZINC ION
Authors:Kumaran, D, Swaminathan, S.
Deposit date:1999-08-11
Release date:1999-08-22
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.06 Å)
Cite:Structure of staphylococcal enterotoxin C2 at various pH levels.
Acta Crystallogr.,Sect.D, 57, 2001
3OC4
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BU of 3oc4 by Molmil
Crystal Structure of a pyridine nucleotide-disulfide family oxidoreductase from the Enterococcus faecalis V583
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Oxidoreductase, pyridine nucleotide-disulfide family, ...
Authors:Kumaran, D, Baumann, K, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2010-08-09
Release date:2010-10-06
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal Structure of a pyridine nucleotide-disulfide family oxidoreductase from the Enterococcus faecalis V583
To be Published
3QW7
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BU of 3qw7 by Molmil
Crystal structure of the protease domain of Botulinum Neurotoxin Serotype A with a peptide inhibitor RRFC
Descriptor: Botulinum neurotoxin type A, SODIUM ION, SULFATE ION, ...
Authors:Kumaran, D, Swaminathan, S.
Deposit date:2011-02-27
Release date:2012-02-08
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Peptide inhibitors of botulinum neurotoxin serotype A: design, inhibition, cocrystal structures, structure-activity relationship and pharmacophore modeling.
Acta Crystallogr.,Sect.D, 68, 2012
3QW6
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BU of 3qw6 by Molmil
Crystal structure of the protease domain of Botulinum Neurotoxin Serotype A with a peptide inhibitor RYGC
Descriptor: Botulinum neurotoxin type A, SODIUM ION, SULFATE ION, ...
Authors:Kumaran, D, Swaminathan, S.
Deposit date:2011-02-26
Release date:2012-02-08
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Peptide inhibitors of botulinum neurotoxin serotype A: design, inhibition, cocrystal structures, structure-activity relationship and pharmacophore modeling.
Acta Crystallogr.,Sect.D, 68, 2012
3QW5
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BU of 3qw5 by Molmil
Crystal structure of the protease domain of Botulinum Neurotoxin Serotype A with a peptide inhibitor RRGF
Descriptor: Botulinum neurotoxin type A, SULFATE ION, ZINC ION, ...
Authors:Kumaran, D, Swaminathan, S.
Deposit date:2011-02-26
Release date:2012-02-08
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Peptide inhibitors of botulinum neurotoxin serotype A: design, inhibition, cocrystal structures, structure-activity relationship and pharmacophore modeling.
Acta Crystallogr.,Sect.D, 68, 2012
3QW8
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Crystal structure of the protease domain of Botulinum Neurotoxin Serotype A with a peptide inhibitor CRGC
Descriptor: 1,2-ETHANEDIOL, Botulinum neurotoxin type A, SODIUM ION, ...
Authors:Kumaran, D, Swaminathan, S.
Deposit date:2011-02-27
Release date:2012-02-08
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Peptide inhibitors of botulinum neurotoxin serotype A: design, inhibition, cocrystal structures, structure-activity relationship and pharmacophore modeling.
Acta Crystallogr.,Sect.D, 68, 2012
3SQS
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BU of 3sqs by Molmil
Crystal Structure of a putative mandelate racemase/muconate lactonizing protein from Dinoroseobacter shibae DFL 12
Descriptor: ACETATE ION, GLYCEROL, MAGNESIUM ION, ...
Authors:Kumaran, D, Almo, S.C, Swaminathan, S, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2011-07-06
Release date:2011-07-27
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal Structure of a putative mandelate racemase/muconate lactonizing protein from Dinoroseobacter shibae DFL 12
To be Published

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