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PDB: 53878 results

9B33
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Structure of concanavalin A (ConA) dimer from the open-state structure of kainate receptor GluK2 in complex with agonist glutamate and positive allosteric modulator BPAM344 bound to one ConA dimer. Type II interface between GluK2 ligand-binding domain and ConA
Descriptor: CALCIUM ION, Concanavalin V, ZINC ION
Authors:Nadezhdin, K.D, Gangwar, S.P, Sobolevsky, A.I.
Deposit date:2024-03-18
Release date:2024-05-22
Last modified:2024-06-26
Method:ELECTRON MICROSCOPY (4.07 Å)
Cite:Kainate receptor channel opening and gating mechanism.
Nature, 630, 2024
8QDU
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BU of 8qdu by Molmil
Formation of left-handed helices by C2'-fluorinated nucleic acids under physiological salt conditions
Descriptor: DNA (5'-D(*(FC)P*GP*(FC)P*GP*(FC)P*G)-3')
Authors:El-Khoury, R, Cabrero, C, Movilla, S, Thorpe, J.D, Roman, M, Orozco, M, Gonzalez, C, Damha, M.J.
Deposit date:2023-08-30
Release date:2024-06-26
Last modified:2024-07-31
Method:SOLUTION NMR
Cite:Formation of left-handed helices by C2'-fluorinated nucleic acids under physiological salt conditions.
Nucleic Acids Res., 52, 2024
4WLH
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BU of 4wlh by Molmil
High resolution crystal structure of human kynurenine aminotransferase-I bound to PLP cofactor
Descriptor: Kynurenine--oxoglutarate transaminase 1
Authors:Nadvi, N.A, Salam, N.K, Park, J, Akladios, F.N, Kapoor, V, Collyer, C.A, Gorrell, M.D, Church, W.B.
Deposit date:2014-10-07
Release date:2014-12-03
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.28 Å)
Cite:High resolution crystal structures of human kynurenine aminotransferase-I bound to PLP cofactor, and in complex with aminooxyacetate.
Protein Sci., 26, 2017
6U4S
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BU of 6u4s by Molmil
wild type cysteine dioxygenase
Descriptor: Cysteine dioxygenase type 1, FE (III) ION
Authors:Meneely, K.M, Chilton, A.S, Forbes, D.L, Ellis, H.R, Lamb, A.L.
Deposit date:2019-08-26
Release date:2020-07-08
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:The 3-His Metal Coordination Site Promotes the Coupling of Oxygen Activation to Cysteine Oxidation in Cysteine Dioxygenase.
Biochemistry, 59, 2020
1DS4
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BU of 1ds4 by Molmil
CYTOCHROME C PEROXIDASE H175G MUTANT, IMIDAZOLE COMPLEX, PH 6, 100K
Descriptor: CYTOCHROME C PEROXIDASE, IMIDAZOLE, PROTOPORPHYRIN IX CONTAINING FE
Authors:Hirst, J, Wilcox, S.K, Williams, P.A, McRee, D.E, Goodin, D.B.
Deposit date:2000-01-07
Release date:2001-03-07
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Replacement of the axial histidine ligand with imidazole in cytochrome c peroxidase. 1. Effects on structure.
Biochemistry, 40, 2001
4WP9
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BU of 4wp9 by Molmil
Crystal structure of Adenylyl cyclase MA1120 from Mycobacterium Avium bound to 2'5'-DD-3'-ATP, Calcium and Magnesium ion
Descriptor: 2',5'-dideoxyadenosine 3'-(tetrahydrogen triphosphate), CALCIUM ION, MAGNESIUM ION, ...
Authors:Bharambe, N.G, Barathy, D.V, Suguna, K.
Deposit date:2014-10-17
Release date:2015-09-02
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.382 Å)
Cite:Autoinhibitory mechanism and activity-related structural changes in a mycobacterial adenylyl cyclase
J.Struct.Biol., 190, 2015
6U5B
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BU of 6u5b by Molmil
CryoEM Structure of Pyocin R2 - precontracted - baseplate
Descriptor: Glue PA0627, Ripcord PA0626, Sheath Initiator PA0617, ...
Authors:Ge, P, Avaylon, J, Scholl, D, Shneider, M.M, Browning, C, Buth, S.A, Plattner, M, Ding, K, Leiman, P.G, Miller, J.F, Zhou, Z.H.
Deposit date:2019-08-27
Release date:2020-04-15
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Action of a minimal contractile bactericidal nanomachine.
Nature, 580, 2020
6XLV
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BU of 6xlv by Molmil
Crystal structure of leukemia-associated N196K mutant of U2AF65 bound to AdML splice site
Descriptor: DNA/RNA (5'-R(P*UP*UP*(UD)P*UP*U)-D(P*(BRU))-R(P*CP*C)-3'), Splicing factor U2AF 65 kDa subunit
Authors:Maji, D, Jenkins, J.L, Kielkopf, C.L.
Deposit date:2020-06-29
Release date:2020-10-07
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Representative cancer-associated U2AF2 mutations alter RNA interactions and splicing.
J.Biol.Chem., 295, 2020
7WN0
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BU of 7wn0 by Molmil
Structure of PfENT1(Y190A) in complex with nanobody 19
Descriptor: Equilibrative nucleoside/nucleobase transporter, nanobody19
Authors:Wang, C, Deng, D, Ren, R.B, Yu, L.Y.
Deposit date:2022-01-17
Release date:2023-02-01
Last modified:2024-11-06
Method:ELECTRON MICROSCOPY (3.64 Å)
Cite:Structural basis of the substrate recognition and inhibition mechanism of Plasmodium falciparum nucleoside transporter PfENT1.
Nat Commun, 14, 2023
5JL7
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BU of 5jl7 by Molmil
HUMAN PLACENTAL AROMATASE CYTOCHROME P450 (CYP19A1): ANDROSTENEDIONE COMPLEX #3
Descriptor: 4-ANDROSTENE-3-17-DIONE, Aromatase, PROTOPORPHYRIN IX CONTAINING FE
Authors:Ghosh, D, Lo, J, Egbuta, C.
Deposit date:2016-04-26
Release date:2017-04-26
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Testosterone complex and non-steroidal ligands of human aromatase.
J. Steroid Biochem. Mol. Biol., 2018
4WQL
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BU of 4wql by Molmil
Crystal structure of aminoglycoside nucleotidylyltransferase ANT(2")-Ia, kanamycin-bound
Descriptor: 2''-aminoglycoside nucleotidyltransferase, GLYCEROL, ISOPROPYL ALCOHOL, ...
Authors:Cox, G, Stogios, P.J, Savchenko, A, Wright, G.D, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2014-10-22
Release date:2014-11-12
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:Structural and Molecular Basis for Resistance to Aminoglycoside Antibiotics by the Adenylyltransferase ANT(2)-Ia.
Mbio, 6, 2015
6U8K
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BU of 6u8k by Molmil
Crystal structure of hepatitis C virus IRES junction IIIabc in complex with Fab HCV3
Descriptor: Heavy chain of Fab HCV3, JIIIabc RNA (68-MER), Light chain of Fab HCV3
Authors:Koirala, D, Lewicka, A, Koldobskaya, Y, Huang, H, Piccirilli, J.A.
Deposit date:2019-09-05
Release date:2019-12-04
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Synthetic Antibody Binding to a Preorganized RNA Domain of Hepatitis C Virus Internal Ribosome Entry Site Inhibits Translation.
Acs Chem.Biol., 15, 2020
1JF3
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BU of 1jf3 by Molmil
Crystal Structure Of Component III Glycera Dibranchiata Monomeric Hemoglobin
Descriptor: PROTOPORPHYRIN IX CONTAINING FE, monomer hemoglobin component III
Authors:Park, H.J, Yang, C, Treff, N, Satterlee, J.D, Kang, C.H.
Deposit date:2001-06-20
Release date:2002-06-20
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystal Structures of Unligated and CN-Ligated Glycera dibranchiata Monomer Ferric Hemoglobin Components III and IV
Proteins, 49, 2002
8Q5M
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BU of 8q5m by Molmil
N-terminal domain of restriction endonuclease Eco15I in the absence of DNA.
Descriptor: Restriction endonuclease (Eco15I)
Authors:Rafalski, D, Krakowska, K, Bochtler, M.
Deposit date:2023-08-09
Release date:2024-07-17
Last modified:2024-09-04
Method:X-RAY DIFFRACTION (2.66 Å)
Cite:Structural analysis of the BisI family of modification dependent restriction endonucleases.
Nucleic Acids Res., 52, 2024
8FZQ
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BU of 8fzq by Molmil
Dehosphorylated, ATP-bound human cystic fibrosis transmembrane conductance regulator (CFTR)
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Cystic fibrosis transmembrane conductance regulator, MAGNESIUM ION
Authors:Levring, J, Terry, D.S, Kilic, Z, Fitzgerald, G.A, Blanchard, S.C, Chen, J.
Deposit date:2023-01-29
Release date:2023-03-29
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:CFTR function, pathology and pharmacology at single-molecule resolution.
Nature, 616, 2023
2WCY
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BU of 2wcy by Molmil
NMR solution structure of factor I-like modules of complement C7.
Descriptor: COMPLEMENT COMPONENT C7
Authors:Phelan, M.M, Thai, C.T, Soares, D.C, Ogata, R.T, Barlow, P.N, Bramham, J.
Deposit date:2009-03-17
Release date:2009-05-19
Last modified:2024-11-13
Method:SOLUTION NMR
Cite:Solution Structure of Factor I-Like Modules from Complement C7 Reveals a Pair of Follistatin Domains in Compact Pseudosymmetric Arrangement.
J.Biol.Chem., 284, 2009
8JXM
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BU of 8jxm by Molmil
Human 3-methylcrotonyl-CoA carboxylase in BCCP-H2 state with MCoA
Descriptor: 5-(HEXAHYDRO-2-OXO-1H-THIENO[3,4-D]IMIDAZOL-6-YL)PENTANAL, Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial, ...
Authors:Liu, D.S, Su, J.Y, Tian, X.Y.
Deposit date:2023-06-30
Release date:2024-07-03
Method:ELECTRON MICROSCOPY (3.49 Å)
Cite:Human 3-methylcrotonyl-CoA carboxylase in
To Be Published
6GW7
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BU of 6gw7 by Molmil
The CTD of HpDprA, a DNA binding Winged Helix domain which do not bind dsDNA
Descriptor: DNA protecting protein DprA
Authors:Lisboa, J, Celma, L, Sanchez, D, Marquis, M, Andreani, J, Guerois, R, Ochsenbein, F, Durand, D, Marsin, S, Cuniasse, P, Radicella, J.P, Quevillon-Cheruel, S.
Deposit date:2018-06-22
Release date:2019-04-24
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:The C-terminal domain of HpDprA is a DNA-binding winged helix domain that does not bind double-stranded DNA.
Febs J., 286, 2019
8JWV
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BU of 8jwv by Molmil
Untethered R0RBR
Descriptor: BARIUM ION, E3 ubiquitin-protein ligase parkin, GLYCEROL, ...
Authors:Lenka, D.R, Kumar, A.
Deposit date:2023-06-29
Release date:2024-07-03
Last modified:2024-09-18
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Additional feedforward mechanism of Parkin activation via binding of phospho-UBL and RING0 in trans.
Elife, 13, 2024
8BOO
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BU of 8boo by Molmil
Spatials structure of amyloidogenic SEM1(45-67) peptide
Descriptor: Semenogelin-1
Authors:Blokhin, D.S, Osetrina, D.A.
Deposit date:2022-11-15
Release date:2023-01-18
Last modified:2024-01-31
Method:SOLUTION NMR
Cite:Spatials structure of amyloidogenic SEM1(45-67) peptide
To Be Published
3ZXY
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BU of 3zxy by Molmil
Structure of S218A mutant of the protease domain of PatA
Descriptor: SUBTILISIN-LIKE PROTEIN
Authors:Koehnke, J, Zollman, D, Vendome, J, Raab, A, Houssen, W.E, Smith, M.C, Jaspars, M, Naismith, J.H.
Deposit date:2011-08-16
Release date:2012-08-29
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:The Discovery of New Cyanobactins from Cyanothece Pcc 7425 Defines a New Signature for Processing of Patellamides.
Chembiochem, 13, 2012
6XYE
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BU of 6xye by Molmil
Cryo-EM structure of the prefusion state of canine distemper virus fusion protein ectodomain
Descriptor: Fusion glycoprotein F1, Fusion glycoprotein F2
Authors:Kalbermatter, D, Fotiadis, D.
Deposit date:2020-01-30
Release date:2020-07-22
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:Cryo-EM structure of the prefusion state of canine distemper virus fusion protein ectodomain.
J Struct Biol X, 4, 2020
3ZZP
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BU of 3zzp by Molmil
Circular permutant of ribosomal protein S6, lacking edge strand beta- 2 of wild-type S6.
Descriptor: RIBOSOMAL PROTEIN S6
Authors:Saraboji, K, Haglund, E, Lindberg, M.O, Oliveberg, M, Logan, D.T.
Deposit date:2011-09-02
Release date:2011-11-23
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (0.96 Å)
Cite:Trimming Down a Protein Structure to its Bare Foldons: Spatial Organization of the Cooperative Unit.
J.Biol.Chem., 287, 2012
7A49
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BU of 7a49 by Molmil
Crystal structure of human protein kinase CK2alpha (CSNK2A1 gene product) in complex with the ATP-competitive inhibitor 6-bromo-5-chloro-1H-triazolo[4,5-b]pyridine
Descriptor: 6-bromanyl-5-chloranyl-1~{H}-[1,2,3]triazolo[4,5-b]pyridine, Casein kinase II subunit alpha, SULFATE ION
Authors:Niefind, K, Lindenblatt, D, Toelzer, C, Bretner, M, Chojnacki, K, Wielechowska, M, Winska, P.
Deposit date:2020-08-19
Release date:2020-12-09
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Synthesis, biological properties and structural study of new halogenated azolo[4,5-b]pyridines as inhibitors of CK2 kinase.
Bioorg.Chem., 106, 2021
2WBX
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BU of 2wbx by Molmil
Crystal structure of mouse cadherin-23 EC1
Descriptor: CADHERIN-23, CALCIUM ION
Authors:Sotomayor, M, Weihofen, W, Gaudet, R, Corey, D.P.
Deposit date:2009-03-05
Release date:2010-04-21
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural Determinants of Cadherin-23 Function in Hearing and Deafness.
Neuron, 66, 2010

227344

数据于2024-11-13公开中

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