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PDB: 42 results

1LOU
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RIBOSOMAL PROTEIN S6
Descriptor: RIBOSOMAL PROTEIN S6
Authors:Otzen, D.E, Kristensen, O, Proctor, M, Oliveberg, M.
Deposit date:1998-11-25
Release date:1998-11-30
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural changes in the transition state of protein folding: alternative interpretations of curved chevron plots.
Biochemistry, 38, 1999
1QJH
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Protein Aggregation and Alzheimer's Disease: Crystallographic Analysis of the Phenomenon. Engineered version of the ribosomal protein S6 used as a stable scaffold to study oligomerization.
Descriptor: 30S ribosomal protein S6, MAGNESIUM ION
Authors:Kristensen, O, Otzen, D.E, Oliveberg, M.
Deposit date:1999-06-24
Release date:2000-06-29
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Designed protein tetramer zipped together with a hydrophobic Alzheimer homology: a structural clue to amyloid assembly.
Proc. Natl. Acad. Sci. U.S.A., 97, 2000
6FLH
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Monomeric Human Cu,Zn Superoxide dismutase, SOD1 7+7, apo form
Descriptor: GLYCEROL, SULFATE ION, Superoxide dismutase [Cu-Zn]
Authors:Wang, H, Yang, F, Logan, D, Oliveberg, M.
Deposit date:2018-01-25
Release date:2018-11-07
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:The Cost of Long Catalytic Loops in Folding and Stability of the ALS-Associated Protein SOD1.
J.Am.Chem.Soc., 140, 2018
3HFF
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Monomeric human Cu,Zn Superoxide dismutase without Zn ligands
Descriptor: Superoxide dismutase [Cu-Zn], ZINC ION
Authors:Saraboji, K, Nordlund, A, Leinartait, L, Oliveberg, M, Logan, D.T.
Deposit date:2009-05-11
Release date:2009-06-16
Last modified:2021-11-10
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Functional features cause misfolding of the ALS-provoking enzyme SOD1.
Proc.Natl.Acad.Sci.USA, 106, 2009
2XJL
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Monomeric Human Cu,Zn Superoxide dismutase without Cu ligands
Descriptor: ACETATE ION, DI(HYDROXYETHYL)ETHER, SODIUM ION, ...
Authors:Saraboji, K, Leinartaite, L, Nordlund, A, Oliveberg, M, Logan, D.T.
Deposit date:2010-07-07
Release date:2010-09-01
Last modified:2018-01-17
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Folding Catalysis by Transient Coordination of Zn2+ to the Cu Ligands of the Als-Associated Enzyme Cu/Zn Superoxide Dismutase 1.
J.Am.Chem.Soc., 132, 2010
2XJK
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Monomeric Human Cu,Zn Superoxide dismutase
Descriptor: COPPER (II) ION, SUPEROXIDE DISMUTASE [CU-ZN], ZINC ION
Authors:Saraboji, K, Leinartaite, L, Nordlund, A, Oliveberg, M, Logan, D.T.
Deposit date:2010-07-07
Release date:2010-09-01
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Folding Catalysis by Transient Coordination of Zn2+ to the Cu Ligands of the Als-Associated Enzyme Cu/Zn Superoxide Dismutase 1.
J.Am.Chem.Soc., 132, 2010
1CQN
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PROTEIN AGGREGATION AND ALZHEIMER'S DISEASE: CRYSTALLOGRAPHIC ANALYSIS OF THE PHENOMENON. ENGINEERED VERSION OF THE RIBOSOMAL PROTEIN S6 USED AS A STABLE SCAFFOLD TO STUDY OLIGOMERIZATION.
Descriptor: RIBOSOMAL PROTEIN S6
Authors:Kristensen, O, Otzen, D.E, Oliveberg, M.
Deposit date:1999-08-08
Release date:2000-09-08
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Designed protein tetramer zipped together with a hydrophobic Alzheimer homology: a structural clue to amyloid assembly.
Proc.Natl.Acad.Sci.USA, 97, 2000
1CQM
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PROTEIN AGGREGATION AND ALZHEIMER'S DISEASE: CRYSTALLOGRAPHIC ANALYSIS OF THE PHENOMENON. ENGINEERED VERSION OF THE RIBOSOMAL PROTEIN S6 USED AS A STABLE SCAFFOLD TO STUDY OLIGOMERIZATION.
Descriptor: RIBOSOMAL PROTEIN S6
Authors:Kristensen, O, Otzen, D.E, Oliveberg, M.
Deposit date:1999-08-08
Release date:2000-09-08
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Designed protein tetramer zipped together with a hydrophobic Alzheimer homology: a structural clue to amyloid assembly.
Proc.Natl.Acad.Sci.USA, 97, 2000
7OS7
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Circular permutant of ribosomal protein S6, swap helix 2, L75A, A92K mutant
Descriptor: 30S ribosomal protein S6,30S ribosomal protein S6
Authors:Wang, H, Logan, D.T, Oliveberg, M.
Deposit date:2021-06-08
Release date:2022-06-22
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Circular permutant of ribosomal protein S6, swap helix 2, L75A, A92K mutant
To Be Published
4XCR
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Monomeric Human Cu,Zn Superoxide dismutase, loops IV and VII deleted, apo form, mutant I35A
Descriptor: Superoxide dismutase [Cu-Zn]
Authors:Wang, H, Logan, D.T, Danielsson, J, Mu, X, Binolfi, A, Theillet, F, Bekei, B, Lang, L, Wennerstrom, H, Selenko, P, Oliveberg, M.
Deposit date:2014-12-18
Release date:2016-01-20
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.602 Å)
Cite:Thermodynamics of protein destabilization in live cells.
Proc. Natl. Acad. Sci. U.S.A., 112, 2015
4BD4
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Monomeric Human Cu,Zn Superoxide dismutase, loops IV and VII deleted, apo form, mutant H43F
Descriptor: GLYCEROL, SUPEROXIDE DISMUTASE [CU-ZN]
Authors:Awad, W, Saraboji, K, Danielsson, J, Lang, L, Kurnik, M, Marklund, S.L, Oliveberg, M, Logan, D.T.
Deposit date:2012-10-04
Release date:2013-02-27
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.78 Å)
Cite:Global Structural Motions from the Strain of a Single Hydrogen Bond.
Proc.Natl.Acad.Sci.USA, 110, 2013
4BCY
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BU of 4bcy by Molmil
Monomeric Human Cu,Zn Superoxide dismutase, mutation H43F
Descriptor: CADMIUM ION, CHLORIDE ION, COPPER (II) ION, ...
Authors:Awad, W, Saraboji, K, Danielsson, J, Lang, L, Kurnik, M, Marklund, S.L, Oliveberg, M, Logan, D.T.
Deposit date:2012-10-03
Release date:2013-02-27
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.272 Å)
Cite:Global Structural Motions from the Strain of a Single Hydrogen Bond.
Proc.Natl.Acad.Sci.USA, 110, 2013
5J0F
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Monomeric Human Cu,Zn Superoxide dismutase, loops IV and VII deleted, apo form, circular permutant P4/5
Descriptor: GLYCEROL, Superoxide dismutase [Cu-Zn],OXIDOREDUCTASE,Superoxide dismutase [Cu-Zn]
Authors:Wang, H, Lang, L, Logan, D, Danielsson, J, Oliveberg, M.
Deposit date:2016-03-28
Release date:2017-02-01
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Tricking a Protein To Swap Strands.
J. Am. Chem. Soc., 138, 2016
5J0G
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Monomeric Human Cu,Zn Superoxide dismutase, loops IV and VII deleted, apo form, circular permutant P7/8
Descriptor: OXIDOREDUCTASE,Superoxide dismutase [Cu-Zn]
Authors:Wang, H, Lang, L, Logan, D, Danielsson, J, Oliveberg, M.
Deposit date:2016-03-28
Release date:2017-02-01
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Tricking a Protein To Swap Strands.
J. Am. Chem. Soc., 138, 2016
5J07
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BU of 5j07 by Molmil
Monomeric Human Cu,Zn Superoxide dismutase, loops IV and VII deleted, apo form, circular permutant P1/2
Descriptor: Superoxide dismutase [Cu-Zn],Superoxide dismutase [Cu-Zn],Superoxide dismutase [Cu-Zn],Superoxide dismutase [Cu-Zn]
Authors:Wang, H, Lang, L, Logan, D, Danielsson, J, Oliveberg, M.
Deposit date:2016-03-27
Release date:2017-02-01
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2 Å)
Cite:Tricking a Protein To Swap Strands.
J. Am. Chem. Soc., 138, 2016
5J0C
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BU of 5j0c by Molmil
Monomeric Human Cu,Zn Superoxide dismutase, loops IV and VII deleted, apo form, circular permutant P2/3
Descriptor: Superoxide dismutase [Cu-Zn],Superoxide dismutase [Cu-Zn],OXIDOREDUCTASE,Superoxide dismutase [Cu-Zn]
Authors:Wang, H, Lang, L, Logan, D, Danielsson, J, Oliveberg, M.
Deposit date:2016-03-28
Release date:2017-02-01
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Tricking a Protein To Swap Strands.
J. Am. Chem. Soc., 138, 2016
3ZZP
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BU of 3zzp by Molmil
Circular permutant of ribosomal protein S6, lacking edge strand beta- 2 of wild-type S6.
Descriptor: RIBOSOMAL PROTEIN S6
Authors:Saraboji, K, Haglund, E, Lindberg, M.O, Oliveberg, M, Logan, D.T.
Deposit date:2011-09-02
Release date:2011-11-23
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (0.96 Å)
Cite:Trimming Down a Protein Structure to its Bare Foldons: Spatial Organization of the Cooperative Unit.
J.Biol.Chem., 287, 2012
4BCZ
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BU of 4bcz by Molmil
Monomeric Human Cu,Zn Superoxide dismutase, loops IV and VII deleted, apo form.
Descriptor: SUPEROXIDE DISMUTASE [CU-ZN]
Authors:Saraboji, K, Awad, W, Danielsson, J, Lang, L, Kurnik, M, Marklund, S.L, Oliveberg, M, Logan, D.T.
Deposit date:2012-10-03
Release date:2013-02-27
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Global Structural Motions from the Strain of a Single Hydrogen Bond.
Proc.Natl.Acad.Sci.USA, 110, 2013
7B8V
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BU of 7b8v by Molmil
Circular permutant of ribosomal protein S6, P54-55
Descriptor: 30S ribosomal protein S6
Authors:Wang, H, Logan, D.T, Oliveberg, M.
Deposit date:2020-12-13
Release date:2022-01-12
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.863 Å)
Cite:Circular permutant of ribosomal protein S6, P54-55
To Be Published
1B21
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BU of 1b21 by Molmil
DELETION OF A BURIED SALT BRIDGE IN BARNASE
Descriptor: PROTEIN (BARNASE), ZINC ION
Authors:Vaughan, C.K, Harryson, P, Buckle, A.M, Oliveberg, M, Fersht, A.R.
Deposit date:1998-12-03
Release date:1998-12-09
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:A structural double-mutant cycle: estimating the strength of a buried salt bridge in barnase.
Acta Crystallogr.,Sect.D, 58, 2002
1B20
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BU of 1b20 by Molmil
DELETION OF A BURIED SALT-BRIDGE IN BARNASE
Descriptor: PROTEIN (BARNASE), ZINC ION
Authors:Vaughan, C.K, Harryson, P, Buckle, A.M, Oliveberg, M, Fersht, A.R.
Deposit date:1998-12-03
Release date:1998-12-09
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:A structural double-mutant cycle: estimating the strength of a buried salt bridge in barnase.
Acta Crystallogr.,Sect.D, 58, 2002
1B2Z
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BU of 1b2z by Molmil
DELETION OF A BURIED SALT BRIDGE IN BARNASE
Descriptor: PROTEIN (BARNASE), ZINC ION
Authors:Vaughan, C.K, Harryson, P, Buckle, A.M, Oliveberg, M, Fersht, A.R.
Deposit date:1998-12-03
Release date:1998-12-09
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:A structural double-mutant cycle: estimating the strength of a buried salt bridge in barnase.
Acta Crystallogr.,Sect.D, 58, 2002
7BFE
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BU of 7bfe by Molmil
Circular permutant of ribosomal protein S6, P54-55 truncated, L21A mutant.
Descriptor: 30S ribosomal protein S6,30S ribosomal protein S6, IODIDE ION
Authors:Wang, H, Logan, D.T, Oliveberg, M.
Deposit date:2021-01-02
Release date:2022-07-13
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Circular permutant of ribosomal protein S6
To Be Published
7BFC
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Circular permutant of ribosomal protein S6, P54-55 truncated,
Descriptor: 30S ribosomal protein S6,30S ribosomal protein S6
Authors:Wang, H, Logan, D.T, Oliveberg, M.
Deposit date:2021-01-02
Release date:2022-07-13
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.13 Å)
Cite:Circular permutant of ribosomal protein S6
To Be Published
2KJW
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BU of 2kjw by Molmil
Solution structure and backbone dynamics of the permutant P54-55
Descriptor: 30S ribosomal protein S6
Authors:Ohman, A, Oliveberg, M, Oman, T.
Deposit date:2009-06-10
Release date:2009-12-22
Last modified:2017-11-22
Method:SOLUTION NMR
Cite:Solution structures and backbone dynamics of the ribosomal protein S6 and its permutant P(54-55)
Protein Sci., 19, 2010

 

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