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PDB: 732 件

8H3F
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Cryo-EM Structure of the KBTBD2-CRL3-CSN complex
分子名称: COP9 signalosome complex subunit 1, COP9 signalosome complex subunit 2, COP9 signalosome complex subunit 3, ...
著者Hu, Y, Mao, Q, Chen, Z, Sun, L.
登録日2022-10-08
公開日2023-10-11
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (6.73 Å)
主引用文献Dynamic molecular architecture and substrate recruitment of cullin3-RING E3 ligase CRL3 KBTBD2.
Nat.Struct.Mol.Biol., 31, 2024
8XPY
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BU of 8xpy by Molmil
Structure of Nipah virus Malaysia string G protein ectodomain monomer bound to single-domain antibody n425 at 3.63 Angstroms overall resolution
分子名称: Glycoprotein G, alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, alpha-D-mannopyranose-(1-6)-alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Sun, L, Chen, Z, Sun, Y, Mao, Q.
登録日2024-01-04
公開日2024-09-18
実験手法ELECTRON MICROSCOPY (3.63 Å)
主引用文献Fully human single-domain antibody targeting a highly conserved cryptic epitope on the Nipah virus G protein.
Nat Commun, 15, 2024
8PNR
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BU of 8pnr by Molmil
Structure of human KCTD15 BTB domain mutant G88D crystal form 1
分子名称: BTB/POZ domain-containing protein KCTD15
著者Cruz Walma, D.A, Cros, J, Bradshaw, W, Richardson, W, Chen, Z, Chalk, R, Wilkie, A, Bullock, A.N.
登録日2023-06-30
公開日2024-03-20
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献BTB domain mutations perturbing KCTD15 oligomerisation cause a distinctive frontonasal dysplasia syndrome.
J Med Genet, 61, 2024
7THM
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BU of 7thm by Molmil
SARS-CoV-2 nsp12/7/8 complex with a native N-terminus nsp9
分子名称: MANGANESE (II) ION, Non-structural protein 7, Non-structural protein 8, ...
著者Osinski, A, Tagliabracci, V.S, Chen, Z, Li, Y.
登録日2022-01-11
公開日2022-03-16
最終更新日2024-01-17
実験手法ELECTRON MICROSCOPY (3.18 Å)
主引用文献The mechanism of RNA capping by SARS-CoV-2.
Nature, 609, 2022
4QP0
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Crystal Structure Analysis of the Endo-1,4-beta-mannanase from Rhizomucor miehei
分子名称: Endo-beta-mannanase, SULFATE ION
著者Zheng, Q.J, Peng, Z, Liu, Y, Yan, Q.J, Chen, Z.Z, Qin, Z.
登録日2014-06-22
公開日2014-11-05
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural insights into the substrate specificity and transglycosylation activity of a fungal glycoside hydrolase family 5 beta-mannosidase.
Acta Crystallogr.,Sect.D, 70, 2014
6V5T
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BU of 6v5t by Molmil
Crystal structure of human prethrombin-2 with tryptophans replaced by 5-F-tryptophan
分子名称: GLYCEROL, Prothrombin, SULFATE ION
著者Ruben, E.A, Chen, Z, Di Cera, E.
登録日2019-12-04
公開日2020-05-13
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献19F NMR reveals the conformational properties of free thrombin and its zymogen precursor prethrombin-2.
J.Biol.Chem., 295, 2020
6V64
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Crystal structure of human thrombin bound to ppack with tryptophans replaced by 5-F-tryptophan
分子名称: D-phenylalanyl-N-[(2S,3S)-6-{[amino(iminio)methyl]amino}-1-chloro-2-hydroxyhexan-3-yl]-L-prolinamide, SODIUM ION, Thrombin heavy chain, ...
著者Ruben, E.A, Chen, Z, Di Cera, E.
登録日2019-12-04
公開日2020-05-13
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.29 Å)
主引用文献19F NMR reveals the conformational properties of free thrombin and its zymogen precursor prethrombin-2.
J.Biol.Chem., 295, 2020
6PXJ
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BU of 6pxj by Molmil
Crystal structure of human thrombin mutant I16T
分子名称: GLYCEROL, MAGNESIUM ION, Thrombin heavy chain, ...
著者Stojanovski, B, Chen, Z, Koester, S.K, Pelc, L.A, Di Cera, E.
登録日2019-07-26
公開日2019-12-18
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Role of the I16-D194 ionic interaction in the trypsin fold.
Sci Rep, 9, 2019
8JMM
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BU of 8jmm by Molmil
Structure of XBB spike protein (S) dimer-trimer in complex with bispecific antibody G7-Fc at 3.75 Angstroms resolution.
分子名称: 7F3 Fv, GW01 Fv, Spike glycoprotein
著者Hao, A, Mao, Q, Chen, Z, Huang, J, Sun, L.
登録日2023-06-05
公開日2024-06-12
実験手法ELECTRON MICROSCOPY (3.75 Å)
主引用文献Structure of XBB spike protein (S) dimer-trimer in complex with bispecific antibody G7-Fc at 3.75 Angstroms resolution.
To Be Published
6PX5
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CRYSTAL STRUCTURE OF HUMAN MEIZOTHROMBIN DESF1 MUTANT S195A bound with PPACK
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, D-phenylalanyl-N-[(2S,3S)-6-{[amino(iminio)methyl]amino}-1-chloro-2-hydroxyhexan-3-yl]-L-prolinamide, Prothrombin, ...
著者Pelc, L.A, Koester, S.K, Chen, Z, Gistover, N, Di Cera, E.
登録日2019-07-24
公開日2019-09-04
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Residues W215, E217 and E192 control the allosteric E*-E equilibrium of thrombin.
Sci Rep, 9, 2019
6PXQ
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BU of 6pxq by Molmil
Crystal structure of human thrombin mutant D194A
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Thrombin heavy chain, Thrombin light chain
著者Stojanovski, B, Chen, Z, Koester, S.K, Pelc, L.A, Di Cera, E.
登録日2019-07-26
公開日2019-12-18
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Role of the I16-D194 ionic interaction in the trypsin fold.
Sci Rep, 9, 2019
7YL2
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BU of 7yl2 by Molmil
Crystal Structure of the first bromodomain of human BRD4 in complex with the inhibitor Y07004
分子名称: Bromodomain-containing protein 4, GLYCEROL, N-(1-ethyl-2-oxidanylidene-3H-indol-5-yl)cyclohexanesulfonamide, ...
著者Huang, Y, Wei, A, Dong, R, Xu, H, Zhang, C, Chen, Z, Li, J, Wu, X, Zhang, Y, Xu, Y.
登録日2022-07-25
公開日2023-07-26
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.62 Å)
主引用文献Crystal Structure of the first bromodomain of human BRD4 in complex with the inhibitor Y07004
To Be Published
7W8L
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BU of 7w8l by Molmil
Crystal Structure of Co-type nitrile hydratase mutant from Pseudonocardia thermophila - M46R
分子名称: COBALT (II) ION, Cobalt-containing nitrile hydratase subunit beta, Nitrile hydratase
著者Ma, D, Cheng, Z.Y, Hou, X.D, Peplowski, L, Lai, Q.P, Fu, K, Yin, D.J, Rao, Y.J, Zhou, Z.M.
登録日2021-12-08
公開日2022-08-24
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.301 Å)
主引用文献Insight into the broadened substrate scope of nitrile hydratase by static and dynamic structure analysis.
Chem Sci, 13, 2022
7W8M
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BU of 7w8m by Molmil
Crystal structure of Co-type nitrile hydratase mutant from Pseudomonas thermophila - A129R
分子名称: COBALT (II) ION, Cobalt-containing nitrile hydratase subunit beta, Nitrile hydratase
著者Ma, D, Cheng, Z.Y, Hou, X.D, Peplowski, L, Lai, Q.P, Fu, K, Yin, D.J, Rao, Y.J, Zhou, Z.M.
登録日2021-12-08
公開日2022-08-24
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Insight into the broadened substrate scope of nitrile hydratase by static and dynamic structure analysis.
Chem Sci, 13, 2022
8Y6V
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BU of 8y6v by Molmil
Near-atomic structure of icosahedrally averaged jumbo bacteriophage PhiKZ capsid
分子名称: gp119, gp120, gp162, ...
著者Yang, Y, Shao, Q, Guo, M, Han, L, Zhao, X, Wang, A, Li, X, Wang, B, Pan, J, Chen, Z, Fokine, A, Sun, L, Fang, Q.
登録日2024-02-03
公開日2024-08-14
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Capsid structure of bacteriophage Phi KZ provides insights into assembly and stabilization of jumbo phages.
Nat Commun, 15, 2024
8HZN
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BU of 8hzn by Molmil
Mouse Pendrin bound chloride in inward state
分子名称: CHLORIDE ION, Pendrin
著者Liu, Q.Y, Zhang, X, Sun, L, Chen, Z.G.
登録日2023-01-09
公開日2024-01-31
実験手法ELECTRON MICROSCOPY (3.25 Å)
主引用文献Mouse Pendrin bound chloride in inward state
To Be Published
7CI1
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BU of 7ci1 by Molmil
Crystal structure of AcrVA2
分子名称: 1,2-ETHANEDIOL, AcrVA2, SPERMIDINE
著者Chen, P, Cheng, Z, Wang, Y.
登録日2020-07-07
公開日2020-10-14
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural Study on Anti-CRISPR Protein AcrVA2
Prog.Biochem.Biophys., 2021
7CI2
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BU of 7ci2 by Molmil
Crystal structure of AcrVA2 in complex with partial MbCpf1
分子名称: AcrVA2, MbCpf1
著者Chen, P, Cheng, Z, Wang, Y.
登録日2020-07-07
公開日2020-10-14
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural Study on Anti-CRISPR Protein AcrVA2
Prog.Biochem.Biophys., 2021
6A59
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BU of 6a59 by Molmil
Structure of histone demethylase REF6 at 1.8A
分子名称: Lysine-specific demethylase REF6, ZINC ION
著者Tian, Z, Chen, Z.
登録日2018-06-22
公開日2019-06-26
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.82 Å)
主引用文献Crystal structures of REF6 and its complex with DNA reveal diverse recognition mechanisms.
Cell Discov, 6, 2020
1AAC
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BU of 1aac by Molmil
AMICYANIN OXIDIZED, 1.31 ANGSTROMS
分子名称: AMICYANIN, COPPER (II) ION
著者Cunane, L.M, Chen, Z.-W, Durley, R.C.E, Mathews, F.S.
登録日1995-09-07
公開日1996-03-08
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.31 Å)
主引用文献X-ray structure of the cupredoxin amicyanin, from Paracoccus denitrificans, refined at 1.31 A resolution.
Acta Crystallogr.,Sect.D, 52, 1996
4RAY
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BU of 4ray by Molmil
Crystal structure of Magnetospirillum gryphiswaldense MSR-1 Apo-Fur
分子名称: CITRATE ANION, DNA-binding transcriptional dual regulator of siderophore biosynthesis and transport(Fur family), SULFATE ION
著者Deng, Z, Liu, Z, Chen, Z.
登録日2014-09-12
公開日2015-07-15
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Mechanistic insights into metal ion activation and operator recognition by the ferric uptake regulator.
Nat Commun, 6
4RAZ
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BU of 4raz by Molmil
Crystal structure of Magnetospirillum gryphiswaldense MSR-1 holo-Fur
分子名称: 1,2-ETHANEDIOL, DNA-binding transcriptional dual regulator of siderophore biosynthesis and transport(Fur family), MANGANESE (II) ION
著者Deng, Z, Wang, Q, Chen, Z.
登録日2014-09-12
公開日2015-07-15
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Mechanistic insights into metal ion activation and operator recognition by the ferric uptake regulator.
Nat Commun, 6
4RB0
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BU of 4rb0 by Molmil
Crystal structure of Magnetospirillum gryphiswaldense MSR-1 SeMet-Apo-Fur
分子名称: CITRATE ANION, DNA-binding transcriptional dual regulator of siderophore biosynthesis and transport(Fur family), SULFATE ION
著者Deng, Z, Chen, Z.
登録日2014-09-12
公開日2015-07-15
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Mechanistic insights into metal ion activation and operator recognition by the ferric uptake regulator.
Nat Commun, 6
4RB1
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BU of 4rb1 by Molmil
Crystal structure of Magnetospirillum gryphiswaldense MSR-1 Fur-Mn2+-E. coli Fur box
分子名称: DNA (5'-D(*CP*GP*CP*GP*AP*TP*AP*AP*TP*GP*AP*TP*AP*AP*TP*CP*AP*TP*TP*AP*TP*CP*CP*GP*C)-3'), DNA-binding transcriptional dual regulator of siderophore biosynthesis and transport(Fur family), MANGANESE (II) ION
著者Deng, Z, Chen, Z.
登録日2014-09-12
公開日2015-07-15
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Mechanistic insights into metal ion activation and operator recognition by the ferric uptake regulator.
Nat Commun, 6
7SR9
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Human alpha-thrombin with 180- and 220- loops replaced with homologous loops from protein C
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, SULFATE ION, ...
著者Di Cera, E, Ruben, E.A, Chen, Z.
登録日2021-11-08
公開日2021-12-08
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献The active site region plays a critical role in Na + binding to thrombin.
J.Biol.Chem., 298, 2022

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件を2024-10-09に公開中

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