Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
1D6J
DownloadVisualize
BU of 1d6j by Molmil
CRYSTAL STRUCTURE OF ADENOSINE 5'-PHOSPHOSULFATE (APS) KINASE FROM PENICILLIUM CHRYSOGENUM
分子名称: ADENOSINE-5'PHOSPHOSULFATE KINASE, L(+)-TARTARIC ACID
著者MacRae, I.J, Segel, I.H, Fisher, A.J.
登録日1999-10-13
公開日2000-02-23
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of adenosine 5'-phosphosulfate kinase from Penicillium chrysogenum.
Biochemistry, 39, 2000
1I2D
DownloadVisualize
BU of 1i2d by Molmil
CRYSTAL STRUCTURE OF ATP SULFURYLASE FROM PENICILLIUM CHRYSOGENUM
分子名称: ADENOSINE-5'-PHOSPHOSULFATE, ATP SULFURYLASE
著者MacRae, I.J, Segel, I.H, Fisher, A.J.
登録日2001-02-07
公開日2001-07-11
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.81 Å)
主引用文献Crystal structure of ATP sulfurylase from Penicillium chrysogenum: insights into the allosteric regulation of sulfate assimilation.
Biochemistry, 40, 2001
1M8P
DownloadVisualize
BU of 1m8p by Molmil
Crystal Structure of P. chrysogenum ATP Sulfurylase in the T-state
分子名称: 3'-PHOSPHATE-ADENOSINE-5'-PHOSPHATE SULFATE, sulfate adenylyltransferase
著者MacRae, I.J, Segel, I.H, Fisher, A.J.
登録日2002-07-25
公開日2002-11-27
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Allosteric Inhibition via R-State Destabilization in ATP Sulfurylase from Penicillium chrysogenum
Nat.Struct.Biol., 9, 2002
2QVW
DownloadVisualize
BU of 2qvw by Molmil
Structure of Giardia Dicer refined against twinned data
分子名称: GLP_546_48378_50642, MANGANESE (II) ION
著者Doudna, J.A, MacRae, I.J.
登録日2007-08-09
公開日2007-09-25
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献An unusual case of pseudo-merohedral twinning in orthorhombic crystals of Dicer
Acta Crystallogr.,Sect.D, 63, 2007
2FFL
DownloadVisualize
BU of 2ffl by Molmil
Crystal Structure of Dicer from Giardia intestinalis
分子名称: Dicer, MANGANESE (II) ION
著者Doudna, J.A, MacRae, I.J, Adams, P.D.
登録日2005-12-19
公開日2006-01-24
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (3.33 Å)
主引用文献Structural Basis of Double-Stranded RNA Processing by Dicer
Science, 311, 2006
7SWF
DownloadVisualize
BU of 7swf by Molmil
Cryo-EM structure of Arabidopsis Ago10-guide-target RNA complex in a central duplex conformation
分子名称: MAGNESIUM ION, Protein argonaute 10, RNA (5'-R(P*CP*CP*AP*UP*UP*GP*UP*CP*AP*CP*AP*CP*UP*CP*CP*AP*A)-3'), ...
著者Xiao, Y, MacRae, I.J.
登録日2021-11-19
公開日2022-08-03
最終更新日2022-10-05
実験手法ELECTRON MICROSCOPY (3.79 Å)
主引用文献The molecular mechanism of microRNA duplex selectivity of Arabidopsis ARGONAUTE10.
Nucleic Acids Res., 50, 2022
7SVA
DownloadVisualize
BU of 7sva by Molmil
Cryo-EM structure of Arabidopsis Ago10-guide RNA complex
分子名称: MAGNESIUM ION, Protein argonaute 10, RNA (5'-R(P*UP*GP*GP*AP*GP*UP*GP*UP*GP*AP*CP*AP*AP*UP*GP*GP*UP*GP*UP*UP*U)-3')
著者Xiao, Y, MacRae, I.J.
登録日2021-11-18
公開日2022-11-23
最終更新日2023-07-05
実験手法ELECTRON MICROSCOPY (3.26 Å)
主引用文献Structural basis for RNA slicing by a plant Argonaute.
Nat.Struct.Mol.Biol., 30, 2023
7SWQ
DownloadVisualize
BU of 7swq by Molmil
Cryo-EM structure of Arabidopsis Ago10-guide-target RNA complex in a bent duplex conformation
分子名称: MAGNESIUM ION, Protein argonaute 10, RNA (5'-R(P*CP*CP*AP*UP*UP*GP*UP*CP*AP*CP*AP*CP*UP*CP*CP*AP*AP*A)-3'), ...
著者Xiao, Y, MacRae, I.J.
登録日2021-11-21
公開日2022-11-23
最終更新日2023-07-05
実験手法ELECTRON MICROSCOPY (3.79 Å)
主引用文献Structural basis for RNA slicing by a plant Argonaute.
Nat.Struct.Mol.Biol., 30, 2023
5JS1
DownloadVisualize
BU of 5js1 by Molmil
Human Argonaute2 Bound to an siRNA
分子名称: MAGNESIUM ION, PHENOL, Protein argonaute-2, ...
著者Schirle, N.T, MacRae, I.J.
登録日2016-05-07
公開日2016-07-20
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.499 Å)
主引用文献Structural Analysis of Human Argonaute-2 Bound to a Modified siRNA Guide.
J.Am.Chem.Soc., 138, 2016
6NIT
DownloadVisualize
BU of 6nit by Molmil
Human Argonaute2-miR-122 bound to a target RNA with four central mismatches (bu4)
分子名称: Protein argonaute-2, RNA (5'-R(P*AP*AP*CP*AP*CP*CP*AP*UP*CP*CP*AP*AP*CP*AP*CP*UP*CP*CP*AP*AP*A)-3'), RNA (5'-R(P*UP*GP*GP*AP*GP*UP*GP*UP*GP*AP*CP*AP*AP*UP*GP*GP*UP*GP*UP*UP*U)-3')
著者Sheu-Gruttadauria, J, MacRae, I.J.
登録日2018-12-31
公開日2019-08-07
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (3.8 Å)
主引用文献Structural Basis for Target-Directed MicroRNA Degradation.
Mol.Cell, 75, 2019
3KS4
DownloadVisualize
BU of 3ks4 by Molmil
Crystal structure of Reston ebolavirus VP35 RNA binding domain
分子名称: Polymerase cofactor VP35
著者Kimberlin, C.R, Bornholdt, Z.A, Li, S, Woods, V.L, Macrae, I.J, Saphire, E.O.
登録日2009-11-20
公開日2010-01-12
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Ebolavirus VP35 uses a bimodal strategy to bind dsRNA for innate immune suppression.
Proc.Natl.Acad.Sci.USA, 107, 2009
3KS8
DownloadVisualize
BU of 3ks8 by Molmil
Crystal structure of Reston ebolavirus VP35 RNA binding domain in complex with 18bp dsRNA
分子名称: 5'-R(*AP*GP*AP*AP*GP*GP*AP*GP*GP*GP*AP*GP*GP*GP*AP*GP*GP*A)-3', 5'-R(*UP*CP*CP*UP*CP*CP*CP*UP*CP*CP*CP*UP*CP*CP*UP*UP*CP*U)-3', Polymerase cofactor VP35
著者Kimberlin, C.R, Bornholdt, Z.A, Li, S, Woods, V.L, Macrae, I.J, Saphire, E.O.
登録日2009-11-20
公開日2010-01-12
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.401 Å)
主引用文献Ebolavirus VP35 uses a bimodal strategy to bind dsRNA for innate immune suppression.
Proc.Natl.Acad.Sci.USA, 107, 2009
5WEA
DownloadVisualize
BU of 5wea by Molmil
Human Argonaute2 Helix-7 Mutant
分子名称: PHENOL, Protein argonaute-2, RNA (5'-R(P*AP*AP*AP*AP*AP*AP*AP*U)-3')
著者Schirle, N.T, Klum, S.M, MacRae, I.J.
登録日2017-07-08
公開日2017-11-22
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (3.12 Å)
主引用文献Helix-7 in Argonaute2 shapes the microRNA seed region for rapid target recognition.
EMBO J., 37, 2018
3Q7C
DownloadVisualize
BU of 3q7c by Molmil
Exonuclease domain of Lassa virus nucleoprotein bound to manganese
分子名称: MANGANESE (II) ION, Nucleoprotein, PHOSPHATE ION, ...
著者Hastie, K.M, Kimberlin, C.R, Zandonatti, M.A, MacRae, I.J, Saphire, E.O.
登録日2011-01-04
公開日2011-02-09
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structure of the Lassa virus nucleoprotein reveals a dsRNA-specific 3' to 5' exonuclease activity essential for immune suppression.
Proc.Natl.Acad.Sci.USA, 108, 2011
3Q7B
DownloadVisualize
BU of 3q7b by Molmil
Exonuclease domain of Lassa virus nucleoprotein
分子名称: Nucleoprotein, PHOSPHATE ION, ZINC ION
著者Hastie, K.M, Kimberlin, C.R, Zandonatti, M.A, MacRae, I.J, Saphire, E.O.
登録日2011-01-04
公開日2011-02-09
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure of the Lassa virus nucleoprotein reveals a dsRNA-specific 3' to 5' exonuclease activity essential for immune suppression.
Proc.Natl.Acad.Sci.USA, 108, 2011
4GHA
DownloadVisualize
BU of 4gha by Molmil
Crystal structure of Marburg virus VP35 RNA binding domain bound to 12-bp dsRNA
分子名称: Polymerase cofactor VP35, RNA (5'-R(*CP*UP*AP*GP*AP*CP*GP*UP*CP*UP*AP*G)-3')
著者Bale, S, Jean-Philippe, J, Bornholdt, Z.A, Kimberlin, C.K, Halfmann, P, Zandonatti, M.A, Kunert, J, Kroon, G.J.A, Kawaoka, Y, MacRae, I.J, Wilson, I.A, Saphire, E.O.
登録日2012-08-07
公開日2012-08-22
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Marburg Virus VP35 Can Both Fully Coat the Backbone and Cap the Ends of dsRNA for Interferon Antagonism.
Plos Pathog., 8, 2012
4GH9
DownloadVisualize
BU of 4gh9 by Molmil
Crystal structure of Marburg virus VP35 RNA binding domain
分子名称: ACETATE ION, Polymerase cofactor VP35
著者Bale, S, Jean-Philippe, J, Bornholdt, Z.A, Kimberlin, C.K, Halfmann, P, Zandonatti, M.A, Kunert, J, Kroon, G.J.A, Kawaoka, Y, MacRae, I.J, Wilson, I.A, Saphire, E.O.
登録日2012-08-07
公開日2012-08-15
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Marburg Virus VP35 Can Both Fully Coat the Backbone and Cap the Ends of dsRNA for Interferon Antagonism.
Plos Pathog., 8, 2012
5JS2
DownloadVisualize
BU of 5js2 by Molmil
Human Argonaute-2 Bound to a Modified siRNA
分子名称: MAGNESIUM ION, PHENOL, PHOSPHATE ION, ...
著者Schirle, N.T, MacRae, I.J.
登録日2016-05-07
公開日2016-07-20
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.954 Å)
主引用文献Structural Analysis of Human Argonaute-2 Bound to a Modified siRNA Guide.
J.Am.Chem.Soc., 138, 2016
5KI6
DownloadVisualize
BU of 5ki6 by Molmil
Human Argonaute-2 bound to a guide RNA with a nucleobase modification at position 1
分子名称: PHENOL, Protein argonaute-2, miR-122
著者Schirle, N.T, MacRae, I.J.
登録日2016-06-16
公開日2016-07-20
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.153 Å)
主引用文献Structure-Guided Control of siRNA Off-Target Effects.
J.Am.Chem.Soc., 138, 2016
4W5Q
DownloadVisualize
BU of 4w5q by Molmil
The Crystal Structure of Human Argonaute2 Bound to a Guide and Target RNA Containing Seed Pairing from 2-8
分子名称: MAGNESIUM ION, PHENOL, Protein argonaute-2, ...
著者Schirle, N.T, MacRae, I.J.
登録日2014-08-18
公開日2014-11-12
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (3.101 Å)
主引用文献Gene regulation. Structural basis for microRNA targeting.
Science, 346, 2014
4W5R
DownloadVisualize
BU of 4w5r by Molmil
The Crystal Structure of Human Argonaute2 Bound to a Guide and Target RNA Containing Seed Pairing from 2-8 (Long Target)
分子名称: ISOPROPYL ALCOHOL, MAGNESIUM ION, PHENOL, ...
著者Schirle, N.T, MacRae, I.J.
登録日2014-08-18
公開日2014-11-12
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Gene regulation. Structural basis for microRNA targeting.
Science, 346, 2014
4W5T
DownloadVisualize
BU of 4w5t by Molmil
The Crystal Structure of Human Argonaute2 Bound to a Guide and Target RNA Containing Seed Pairing from 2-7
分子名称: MAGNESIUM ION, PHENOL, Protein argonaute-2, ...
著者Schirle, N.T, MacRae, I.J.
登録日2014-08-18
公開日2014-11-12
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Gene regulation. Structural basis for microRNA targeting.
Science, 346, 2014
4W5N
DownloadVisualize
BU of 4w5n by Molmil
The Crystal Structure of Human Argonaute2 Bound to a Defined Guide RNA
分子名称: MAGNESIUM ION, PHENOL, Protein argonaute-2, ...
著者Schirle, N.T, Sheu-Gruttadauria, J, MacRae, I.J.
登録日2014-08-18
公開日2014-11-12
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Gene regulation. Structural basis for microRNA targeting.
Science, 346, 2014
4W5O
DownloadVisualize
BU of 4w5o by Molmil
The Crystal Structure of Human Argonaute2 Bound to a Guide and Target RNA Containing Seed Pairing from 2-9
分子名称: ISOPROPYL ALCOHOL, MAGNESIUM ION, PHENOL, ...
著者Schirle, N.T, MacRae, I.J.
登録日2014-08-18
公開日2014-11-12
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.802 Å)
主引用文献Gene regulation. Structural basis for microRNA targeting.
Science, 346, 2014
4OLB
DownloadVisualize
BU of 4olb by Molmil
Crystal Structure of Human Argonaute2 Bound to Tryptophan
分子名称: 5'-R(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*U)-3', Protein argonaute-2, TRYPTOPHAN
著者Schirle, N.T, MacRae, I.J.
登録日2014-01-23
公開日2014-02-05
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.899 Å)
主引用文献The crystal structure of human Argonaute2.
Science, 336, 2012

 

12>

218853

件を2024-04-24に公開中

PDB statisticsPDBj update infoContact PDBjnumon