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7ULW
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BU of 7ulw by Molmil
CryoEM structure of human LACTB filament
分子名称: Serine beta-lactamase-like protein LACTB, mitochondrial
著者Bennett, J.A, Steward, L.R, Aydin, H.
登録日2022-04-05
公開日2022-12-07
最終更新日2023-01-11
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献The structure of the human LACTB filament reveals the mechanisms of assembly and membrane binding.
Plos Biol., 20, 2022
7UJA
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BU of 7uja by Molmil
Cryo-EM structure of Human respiratory syncytial virus F variant (construct pXCS847A)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, AM14 Fab heavy chain, AM14 Fab light chain, ...
著者Lees, J.A, Ammirati, M, Han, S.
登録日2022-03-30
公開日2023-04-19
最終更新日2023-05-10
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Rational design of a highly immunogenic prefusion-stabilized F glycoprotein antigen for a respiratory syncytial virus vaccine.
Sci Transl Med, 15, 2023
5KSE
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BU of 5kse by Molmil
Flap endonuclease 1 (FEN1) R100A with 5'-flap substrate DNA and Sm3+
分子名称: DNA (5'-D(*AP*CP*CP*GP*TP*CP*C)-3'), DNA (5'-D(*AP*CP*TP*CP*TP*GP*CP*CP*TP*CP*AP*AP*GP*AP*CP*GP*GP*T)-3'), DNA (5'-D(P*TP*AP*AP*TP*TP*GP*AP*GP*GP*CP*AP*GP*AP*GP*T)-3'), ...
著者Tsutakawa, S.E, Arvai, A.S, Tainer, J.A.
登録日2016-07-08
公開日2017-06-28
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.105 Å)
主引用文献Phosphate steering by Flap Endonuclease 1 promotes 5'-flap specificity and incision to prevent genome instability.
Nat Commun, 8, 2017
7XT3
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BU of 7xt3 by Molmil
Crystal Structure of Hepatitis virus A 2C protein 128-335 aa
分子名称: Genome polyprotein, PHOSPHATE ION
著者Chen, P, Wojdyla, J.A, Li, Z, Wang, M, Cui, S.
登録日2022-05-16
公開日2022-07-27
最終更新日2022-11-23
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Biochemical and structural characterization of hepatitis A virus 2C reveals an unusual ribonuclease activity on single-stranded RNA.
Nucleic Acids Res., 50, 2022
6VRK
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BU of 6vrk by Molmil
Cryo-EM structure of the wild-type human serotonin transporter complexed with Br-paroxetine and 8B6 Fab
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 8B6 antibody, heavy chain, ...
著者Coleman, J.A, Navratna, V, Yang, D.
登録日2020-02-07
公開日2020-03-11
最終更新日2020-09-23
実験手法ELECTRON MICROSCOPY (4.1 Å)
主引用文献Chemical and structural investigation of the paroxetine-human serotonin transporter complex.
Elife, 9, 2020
6W2B
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BU of 6w2b by Molmil
Anomalous bromine signal reveals the position of Br-paroxetine complexed with the serotonin transporter at the central site
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 8B6 heavy chain antibody fragment, 8B6 light chain antibody fragment, ...
著者Coleman, J.A, Navratna, V, Yang, D.
登録日2020-03-05
公開日2020-03-25
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (4.7 Å)
主引用文献Chemical and structural investigation of the paroxetine-human serotonin transporter complex.
Elife, 9, 2020
6VRL
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BU of 6vrl by Molmil
Cryo-EM structure of the wild-type human serotonin transporter complexed with I-paroxetine and 8B6 Fab
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 8B6 antibody, heavy chain, ...
著者Coleman, J.A, Navratna, V, Yang, D.
登録日2020-02-07
公開日2020-03-11
最終更新日2020-09-23
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Chemical and structural investigation of the paroxetine-human serotonin transporter complex.
Elife, 9, 2020
6VRH
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BU of 6vrh by Molmil
Cryo-EM structure of the wild-type human serotonin transporter complexed with paroxetine and 8B6 Fab
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 8B6 antibody, heavy chain, ...
著者Coleman, J.A, Navratna, V, Yang, D.
登録日2020-02-07
公開日2020-03-11
最終更新日2020-09-23
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Chemical and structural investigation of the paroxetine-human serotonin transporter complex.
Elife, 9, 2020
6W2C
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BU of 6w2c by Molmil
Anomalous iodine signal reveals the position of I-paroxetine complexed with the serotonin transporter at the central site
分子名称: 8B6 heavy chain antibody fragment, 8B6 light chain antibody fragment, I-paroxetine, ...
著者Coleman, J.A, Navratna, V, Yang, D.
登録日2020-03-05
公開日2020-03-25
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (6.3 Å)
主引用文献Chemical and structural investigation of the paroxetine-human serotonin transporter complex.
Elife, 9, 2020
2HI3
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BU of 2hi3 by Molmil
Solution structure of the homeodomain-only protein HOP
分子名称: Homeodomain-only protein
著者Mackay, J.P, Kook, H, Epstein, J.A, Simpson, R.J, Yung, W.W.
登録日2006-06-28
公開日2007-01-02
最終更新日2022-03-09
実験手法SOLUTION NMR
主引用文献Analysis of the structure and function of the transcriptional coregulator HOP
Biochemistry, 45, 2006
4LZM
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BU of 4lzm by Molmil
COMPARISON OF THE CRYSTAL STRUCTURE OF BACTERIOPHAGE T4 LYSOZYME AT LOW, MEDIUM, AND HIGH IONIC STRENGTHS
分子名称: BETA-MERCAPTOETHANOL, CHLORIDE ION, T4 LYSOZYME
著者Bell, J.A, Wilson, K, Zhang, X.-J, Faber, H.R, Nicholson, H, Matthews, B.W.
登録日1991-01-25
公開日1992-07-15
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Comparison of the crystal structure of bacteriophage T4 lysozyme at low, medium, and high ionic strengths.
Proteins, 10, 1991
6Z1M
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BU of 6z1m by Molmil
Structure of an Ancestral glycosidase (family 1) bound to heme
分子名称: 1,2-ETHANEDIOL, Ancestral reconstructed glycosidase, GLYCEROL, ...
著者Gavira, J.A, Risso, V.A, Sanchez-Ruiz, J.M, Gamiz-Arco, G, Gutierrez-Rus, L, Ibarra-Molero, B, Oshino, Y, Petrovic, D, Romero-Rivera, A, Seelig, B, Kamerlin, S.C.L, Gaucher, E.A.
登録日2020-05-14
公開日2020-07-22
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Heme-binding enables allosteric modulation in an ancient TIM-barrel glycosidase.
Nat Commun, 12, 2021
6Z1H
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BU of 6z1h by Molmil
Ancestral glycosidase (family 1)
分子名称: ANCESTRAL RECONSTRUCTED GLYCOSIDASE, GLYCEROL, ISOPROPYL ALCOHOL, ...
著者Gavira, J.A, Risso, V.A, Sanchez-Ruiz, J.M, Gamiz-Arco, G, Gutierrez-Rus, L, Ibarra-Molero, B, Hoshino, Y, Petrovic, D, Romero-Rivera, A, Seelig, B, Kamerlin, S.C.L, Gaucher, E.A.
登録日2020-05-13
公開日2020-07-22
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Heme-binding enables allosteric modulation in an ancient TIM-barrel glycosidase.
Nat Commun, 12, 2021
1Z4U
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BU of 1z4u by Molmil
hepatitis C virus NS5B RNA-dependent RNA polymerase complex with inhibitor PHA-00799585
分子名称: (2Z)-2-[(1-ADAMANTYLCARBONYL)AMINO]-3-[4-(2-BROMOPHENOXY)PHENYL]PROP-2-ENOIC ACID, CHLORIDE ION, GLYCEROL, ...
著者Pfefferkorn, J.A, Greene, M, Nugent, R, Gross, R.J, Mitchell, M.A, Finzel, B.C, Harris, M.S, Wells, P.A, Shelly, J.A, Anstadt, R.
登録日2005-03-16
公開日2005-06-07
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Inhibitors of HCV NS5B polymerase. Part 2: Evaluation of the northern region of (2Z)-2-benzoylamino-3-(4-phenoxy-phenyl)-acrylic acid
Bioorg.Med.Chem.Lett., 15, 2005
1YVF
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BU of 1yvf by Molmil
Hepatitis C virus NS5B RNA-dependent RNA polymerase complex with inhibitor PHA-00729145
分子名称: (2Z)-2-(BENZOYLAMINO)-3-[4-(2-BROMOPHENOXY)PHENYL]-2-PROPENOIC ACID, CHLORIDE ION, GLYCEROL, ...
著者Pfefferkorn, J.A, Greene, M.L, Nugent, R.A, Gross, R.J, Mitchell, M.A, Finzel, B.C, Harris, M.S, Wells, P.A, Shelly, J.A, Anstadt, R.A, Kilkuskie, R.E, Kopta, L.A, Schwende, F.J.
登録日2005-02-15
公開日2005-04-19
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Inhibitors of HCV NS5B polymerase. Part 1: Evaluation of the southern region of (2Z)-2-(benzoylamino)-3-(5-phenyl-2-furyl)acrylic acid.
Bioorg.Med.Chem.Lett., 15, 2005
2ACL
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BU of 2acl by Molmil
Liver X-Receptor alpha Ligand Binding Domain with SB313987
分子名称: 1-BENZYL-3-(4-METHOXYPHENYLAMINO)-4-PHENYLPYRROLE-2,5-DIONE, Oxysterols receptor LXR-alpha, RETINOIC ACID, ...
著者Jaye, M.C, Krawiec, J.A, Campobasso, N, Smallwood, A, Qiu, C, Lu, Q, Kerrigan, J.J.
登録日2005-07-19
公開日2005-09-20
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Discovery of substituted maleimides as liver x receptor agonists and determination of a ligand-bound crystal structure.
J.Med.Chem., 48, 2005
3KPC
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BU of 3kpc by Molmil
Crystal Structure of the CBS domain pair of protein MJ0100 in complex with 5 -methylthioadenosine and S-adenosyl-L-methionine
分子名称: 5'-DEOXY-5'-METHYLTHIOADENOSINE, S-ADENOSYLMETHIONINE, Uncharacterized protein MJ0100
著者Lucas, M, Oyenarte, I, Garcia, I.G, Arribas, E.A, Encinar, J.A, Kortazar, D, Fernandez, J.A, Mato, J.M, Martinez-Chantar, M.L, Martinez-Cruz, L.A.
登録日2009-11-16
公開日2010-01-12
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献Binding of S-Methyl-5'-Thioadenosine and S-Adenosyl-l-Methionine to Protein MJ0100 Triggers an Open-to-Closed Conformational Change in Its CBS Motif Pair.
J.Mol.Biol., 396, 2010
3KPD
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BU of 3kpd by Molmil
Crystal Structure of the CBS domain pair of protein MJ0100 in complex with 5 -methylthioadenosine and S-adenosyl-L-methionine.
分子名称: 5'-DEOXY-5'-METHYLTHIOADENOSINE, S-ADENOSYLMETHIONINE, Uncharacterized protein MJ0100
著者Lucas, M, Oyenarte, I, Garcia, I.G, Arribas, E.A, Encinar, J.A, Kortazar, D, Fernandez, J.A, Mato, J.M, Martinez-Chantar, M.L, Martinez-Cruz, L.A.
登録日2009-11-16
公開日2010-01-12
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.91 Å)
主引用文献Binding of S-Methyl-5'-Thioadenosine and S-Adenosyl-l-Methionine to Protein MJ0100 Triggers an Open-to-Closed Conformational Change in Its CBS Motif Pair.
J.Mol.Biol., 396, 2010
3KPB
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BU of 3kpb by Molmil
Crystal Structure of the CBS domain pair of protein MJ0100 in complex with 5 -methylthioadenosine and S-adenosyl-L-methionine.
分子名称: GLYCEROL, S-ADENOSYLMETHIONINE, Uncharacterized protein MJ0100
著者Lucas, M, Oyenarte, I, Garcia, I.G, Arribas, E.A, Encinar, J.A, Kortazar, D, Fernandez, J.A, Mato, J.M, Martinez-Cruz, L.A.
登録日2009-11-16
公開日2010-01-12
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Binding of S-Methyl-5'-Thioadenosine and S-Adenosyl-l-Methionine to Protein MJ0100 Triggers an Open-to-Closed Conformational Change in Its CBS Motif Pair.
J.Mol.Biol., 396, 2010
3NN8
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BU of 3nn8 by Molmil
Crystal structure of engineered antibody fragment based on 3D5
分子名称: Engineered scFv
著者Lieberman, R.L, Maynard, J.A, Drury, J.E, Pai, J, Culver, J.A.
登録日2010-06-23
公開日2011-06-29
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Peptide-binding single chain Antibody fragment (SCFV) chaperones for protein co-crystallization
To be Published
6C70
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BU of 6c70 by Molmil
Cryo-EM structure of Orco
分子名称: Odorant receptor
著者Butterwick, J.A, Kim, K.H, Walz, T, Ruta, V.
登録日2018-01-19
公開日2018-08-22
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Cryo-EM structure of the insect olfactory receptor Orco.
Nature, 560, 2018
3BVD
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BU of 3bvd by Molmil
Structure of Surface-engineered Cytochrome ba3 Oxidase from Thermus thermophilus under Xenon Pressure, 100psi 5min
分子名称: COPPER (II) ION, Cytochrome c oxidase polypeptide 2A, Cytochrome c oxidase subunit 1, ...
著者Luna, V.M, Chen, Y, Fee, J.A, Stout, C.D.
登録日2008-01-07
公開日2008-05-20
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (3.37 Å)
主引用文献Crystallographic Studies of Xe and Kr Binding within the Large Internal Cavity of Cytochrome ba3 from Thermus thermophilus: Structural Analysis and Role of Oxygen Transport Channels in the Heme-Cu Oxidases.
Biochemistry, 47, 2008
1DWW
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BU of 1dww by Molmil
MURINE INDUCIBLE NITRIC OXIDE SYNTHASE OXYGENASE DIMER N-hydroxyarginine and dihydrobiopterin
分子名称: 2-AMINO-6-(1,2-DIHYDROXY-PROPYL)-7,8-DIHYDRO-6H-PTERIDIN-4-ONE, N-OMEGA-HYDROXY-L-ARGININE, NITRIC OXIDE SYNTHASE, ...
著者Crane, B.R, Arvai, A.S, Getzoff, E.D, Stuehr, D.J, Tainer, J.A.
登録日1999-12-14
公開日2000-02-06
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Structures of the N(Omega)-Hydroxy-L-Arginine Complex of Inducible Nitric Oxide Synthase Oxygenase Dimer with Active Andinactive Pterins
Biochemistry, 39, 2000
1DWX
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MURINE INDUCIBLE NITRIC OXIDE SYNTHASE OXYGENASE DIMER N-hydroxyarginine and tetrahydrobiopterin
分子名称: 5,6,7,8-TETRAHYDROBIOPTERIN, N-OMEGA-HYDROXY-L-ARGININE, NITRIC OXIDE SYNTHASE, ...
著者Crane, B.R, Arvai, A.S, Getzoff, E.D, Stuehr, D.J, Tainer, J.A.
登録日1999-12-14
公開日2000-02-06
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structures of the N(Omega)-Hydroxy-L-Arginine Complex of Inducible Nitric Oxide Synthase Oxygenase Dimer with Active Andinactive Pterins
Biochemistry, 39, 2000
1DWV
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MURINE INDUCIBLE NITRIC OXIDE SYNTHASE OXYGENASE DIMER N-hydroxyarginine and 4-amino tetrahydrobiopterin
分子名称: 2,4-DIAMINO-6-[2,3-DIHYDROXY-PROP-3-YL]-5,6,7,8-TETRAHYDROPTERIDINE, N-OMEGA-HYDROXY-L-ARGININE, NITRIC OXIDE SYNTHASE, ...
著者Crane, B.R, Arvai, A.S, Getzoff, E.D, Stuehr, D.J, Tainer, J.A.
登録日1999-12-14
公開日2000-02-06
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Structures of the N(Omega)-Hydroxy-L-Arginine Complex of Inducible Nitric Oxide Synthase Oxygenase Dimer with Active Andinactive Pterins
Biochemistry, 39, 2000

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