Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
1CZB
DownloadVisualize
BU of 1czb by Molmil
ATOMIC RESOLUTION ASV INTEGRASE CORE DOMAIN FROM HEPES
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, AVIAN SARCOMA VIRUS INTEGRASE
Authors:Lubkowski, J, Dauter, Z, Yang, F, Alexandratos, J, Merkel, G, Skalka, A.M, Wlodawer, A.
Deposit date:1999-09-01
Release date:1999-09-08
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.06 Å)
Cite:Atomic resolution structures of the core domain of avian sarcoma virus integrase and its D64N mutant.
Biochemistry, 38, 1999
7XY9
DownloadVisualize
BU of 7xy9 by Molmil
Cryo-EM structure of secondary alcohol dehydrogenases TbSADH after carrier-free immobilization based on weak intermolecular interactions
Descriptor: MAGNESIUM ION, NADP-dependent isopropanol dehydrogenase, ZINC ION
Authors:Chen, Q, Li, X, Yang, F, Qu, G, Sun, Z.T, Wang, Y.J.
Deposit date:2022-06-01
Release date:2023-06-07
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (2.12 Å)
Cite:Active and stable alcohol dehydrogenase-assembled hydrogels via synergistic bridging of triazoles and metal ions.
Nat Commun, 14, 2023
7D77
DownloadVisualize
BU of 7d77 by Molmil
Cryo-EM structure of the cortisol-bound adhesion receptor GPR97-Go complex
Descriptor: (11alpha,14beta)-11,17,21-trihydroxypregn-4-ene-3,20-dione, Adhesion G protein-coupled receptor G3; GPR97, CHOLESTEROL, ...
Authors:Ping, Y, Mao, C, Xiao, P, Zhao, R, Jiang, Y, Yang, Z, An, W, Shen, D, Yang, F, Zhang, H, Qu, C, Shen, Q, Tian, C, Li, Z, Li, S, Wang, G, Tao, X, Wen, X, Zhong, Y, Yang, J, Yi, F, Yu, X, Xu, E, Zhang, Y, Sun, J.
Deposit date:2020-10-03
Release date:2021-02-03
Last modified:2021-02-10
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Structures of the glucocorticoid-bound adhesion receptor GPR97-G o complex.
Nature, 589, 2021
7D76
DownloadVisualize
BU of 7d76 by Molmil
Cryo-EM structure of the beclomethasone-bound adhesion receptor GPR97-Go complex
Descriptor: (8~{S},9~{R},10~{S},11~{S},13~{S},14~{S},16~{S},17~{R})-9-chloranyl-10,13,16-trimethyl-11,17-bis(oxidanyl)-17-(2-oxidanylethanoyl)-6,7,8,11,12,14,15,16-octahydrocyclopenta[a]phenanthren-3-one, Adhesion G protein-coupled receptor G3; GPR97, CHOLESTEROL, ...
Authors:Ping, Y, Mao, C, Xiao, P, Zhao, R, Jiang, Y, Yang, Z, An, W, Shen, D, Yang, F, Zhang, H, Qu, C, Shen, Q, Tian, C, Li, Z, Li, S, Wang, G, Tao, X, Wen, X, Zhong, Y, Yang, J, Yi, F, Yu, X, Xu, E, Zhang, Y, Sun, J.
Deposit date:2020-10-03
Release date:2021-02-03
Last modified:2024-10-30
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structures of the glucocorticoid-bound adhesion receptor GPR97-G o complex.
Nature, 589, 2021
7VQ1
DownloadVisualize
BU of 7vq1 by Molmil
Structure of Apo-hsTRPM2 channel
Descriptor: Transient receptor potential cation channel subfamily M member 2
Authors:Yu, X.F, Xie, Y, Zhang, X.K, Ma, C, Guo, J.T, Yang, F, Yang, W.
Deposit date:2021-10-18
Release date:2021-12-22
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3.76 Å)
Cite:Structural and functional basis of the selectivity filter as a gate in human TRPM2 channel.
Cell Rep, 37, 2021
7VQ2
DownloadVisualize
BU of 7vq2 by Molmil
Structure of Apo-hsTRPM2 channel TM domain
Descriptor: Transient receptor potential cation channel subfamily M member 2
Authors:Yu, X.F, Xie, Y, Zhang, X.K, Ma, C, Guo, J.T, Yang, F, Yang, W.
Deposit date:2021-10-18
Release date:2021-12-22
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (3.68 Å)
Cite:Structural and functional basis of the selectivity filter as a gate in human TRPM2 channel.
Cell Rep, 37, 2021
4LJY
DownloadVisualize
BU of 4ljy by Molmil
Crystal structure of RNA splicing effector Prp5 in complex with ADP
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
Authors:Zhang, Z.-M, Li, J, Yang, F, Xu, Y, Zhou, J.
Deposit date:2013-07-05
Release date:2013-12-11
Last modified:2019-12-25
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structure of Prp5p reveals interdomain interactions that impact spliceosome assembly.
Cell Rep, 5, 2013
4LK2
DownloadVisualize
BU of 4lk2 by Molmil
Crystal structure of RNA splicing effector Prp5
Descriptor: NICKEL (II) ION, Pre-mRNA-processing ATP-dependent RNA helicase PRP5
Authors:Zhang, Z.-M, Li, J, Yang, F, Xu, Y, Zhou, J.
Deposit date:2013-07-05
Release date:2013-12-11
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.12 Å)
Cite:Crystal structure of Prp5p reveals interdomain interactions that impact spliceosome assembly.
Cell Rep, 5, 2013
7XWO
DownloadVisualize
BU of 7xwo by Molmil
Neurokinin A bound to active human neurokinin 2 receptor in complex with G324
Descriptor: G324, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:Sun, W.J, Yuan, Q.N, Zhang, H.H, Yang, F, Ling, S.L, Lv, P, Eric, X, Tian, C.L, Yin, W.C, Shi, P.
Deposit date:2022-05-26
Release date:2023-05-31
Last modified:2023-12-13
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Structural insights into the activation of neurokinin 2 receptor by neurokinin A.
Cell Discov, 8, 2022
5Z3R
DownloadVisualize
BU of 5z3r by Molmil
Crystal Structure of Delta 5-3-Ketosteroid Isomerase from Mycobacterium sp.
Descriptor: Steroid delta-isomerase
Authors:Cheng, X.Y, Peng, F, Yang, F, Huang, Y.Q, Su, Z.D.
Deposit date:2018-01-08
Release date:2018-01-31
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.42 Å)
Cite:Structure-based reconstruction of a Mycobacterium hypothetical protein into an active Delta5-3-ketosteroid isomerase.
Biochim Biophys Acta Proteins Proteom, 1867, 2019
5Z38
DownloadVisualize
BU of 5z38 by Molmil
Crystal structure of CsrA bound to CesT
Descriptor: CesT protein, Truncated-CsrA, wild type CsrA
Authors:Ye, F, Yang, F, Yu, R, Lin, X, Qi, J, Chen, Z, Gao, G.F, Lu, G.
Deposit date:2018-01-05
Release date:2018-04-04
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.292 Å)
Cite:Molecular basis of binding between the global post-transcriptional regulator CsrA and the T3SS chaperone CesT
Nat Commun, 9, 2018
6A0P
DownloadVisualize
BU of 6a0p by Molmil
Crystal structure of Usutu virus envelope protein in the pre-fusion state
Descriptor: Envelope protein
Authors:Lu, G, Chen, Z, Ye, F, Lin, S, Yang, F, Cheng, Y.
Deposit date:2018-06-06
Release date:2018-12-26
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of Usutu virus envelope protein in the pre-fusion state
Virol. J., 15, 2018
2MCQ
DownloadVisualize
BU of 2mcq by Molmil
NMR structure of a BolA-like hypothetical protein RP812 from Rickettsia prowazekii, Seattle structural genomics center for infectious disease (SSGCID)
Descriptor: Uncharacterized protein RP812
Authors:Chen, Y, Barnwal, R, Yang, F, Varani, G, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2013-08-22
Release date:2013-10-09
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:NMR structure of a BolA-like hypothetical protein RP812 from Rickettsia prowazekii, Seattle structural genomics center for infectious disease (SSGCID)
To be Published
2N7A
DownloadVisualize
BU of 2n7a by Molmil
Solution structure of the human Siglec-8 lectin domain
Descriptor: Sialic acid-binding Ig-like lectin 8
Authors:Proepster, J.M, Yang, F, Rabbani, S, Ernst, B, Allain, F.H.-T, Schubert, M.
Deposit date:2015-09-07
Release date:2016-07-06
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structural basis for sulfation-dependent self-glycan recognition by the human immune-inhibitory receptor Siglec-8.
Proc.Natl.Acad.Sci.USA, 113, 2016
2MZY
DownloadVisualize
BU of 2mzy by Molmil
1H, 13C, and 15N Chemical Shift Assignments and structure of Probable Fe(2+)-trafficking protein from Burkholderia pseudomallei 1710b.
Descriptor: Probable Fe(2+)-trafficking protein
Authors:Tang, C, Yang, F, Barnwal, R, Varani, G, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2015-02-26
Release date:2015-03-25
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structure of Probable Fe(2+)-trafficking protein
To be Published
2L0I
DownloadVisualize
BU of 2l0i by Molmil
Solution structure of Rtt103 CTD-interacting domain bound to a Ser2 phosphorylated CTD peptide
Descriptor: DNA-directed RNA polymerase, Regulator of Ty1 transposition protein 103
Authors:Lunde, B.M, Reichow, S.L, Kim, M, Suh, H, Leeper, T.C, Yang, F, Mutschler, H, Buratowski, S, Meinhart, A, Varani, G.
Deposit date:2010-07-06
Release date:2010-09-08
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Cooperative interaction of transcription termination factors with the RNA polymerase II C-terminal domain.
Nat.Struct.Mol.Biol., 17, 2010
2N7B
DownloadVisualize
BU of 2n7b by Molmil
Solution structure of the human Siglec-8 lectin domain in complex with 6'sulfo sialyl Lewisx
Descriptor: 3-aminopropan-1-ol, N-acetyl-alpha-neuraminic acid-(2-3)-6-O-sulfo-beta-D-galactopyranose-(1-4)-[alpha-L-fucopyranose-(1-3)]2-acetamido-2-deoxy-beta-D-glucopyranose, Sialic acid-binding Ig-like lectin 8
Authors:Proepster, J.M, Yang, F, Rabbani, S, Ernst, B, Allain, F.H.-T, Schubert, M.
Deposit date:2015-09-07
Release date:2016-07-06
Last modified:2020-07-29
Method:SOLUTION NMR
Cite:Structural basis for sulfation-dependent self-glycan recognition by the human immune-inhibitory receptor Siglec-8.
Proc.Natl.Acad.Sci.USA, 113, 2016
8J1H
DownloadVisualize
BU of 8j1h by Molmil
Agonist1 and Ruthenium Red bound state of mTRPV4
Descriptor: 8-fluoranyl-3-[4-(4-fluoranylphenoxy)phenyl]-2-(4-methylpiperazin-1-yl)quinazolin-4-one, Transient receptor potential cation channel subfamily V member 4
Authors:Zhen, W.X, Yang, F.
Deposit date:2023-04-12
Release date:2023-08-09
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.88 Å)
Cite:Structural basis of ligand activation and inhibition in a mammalian TRPV4 ion channel.
Cell Discov, 9, 2023
8J1F
DownloadVisualize
BU of 8j1f by Molmil
GSK101 bound state of mTRPV4
Descriptor: N-[(2S)-1-{4-[N-(2,4-dichlorobenzene-1-sulfonyl)-L-seryl]piperazin-1-yl}-4-methyl-1-oxopentan-2-yl]-1-benzothiophene-2-carboxamide, Transient receptor potential cation channel subfamily V member 4
Authors:Zhen, W.X, Yang, F.
Deposit date:2023-04-12
Release date:2023-08-09
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.62 Å)
Cite:Structural basis of ligand activation and inhibition in a mammalian TRPV4 ion channel.
Cell Discov, 9, 2023
8J1D
DownloadVisualize
BU of 8j1d by Molmil
Cryo-EM structure of apo state mTRPV4
Descriptor: Transient receptor potential cation channel subfamily V member 4
Authors:Zhen, W.X, Yang, F.
Deposit date:2023-04-12
Release date:2023-08-09
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.59 Å)
Cite:Structural basis of ligand activation and inhibition in a mammalian TRPV4 ion channel.
Cell Discov, 9, 2023
8J1B
DownloadVisualize
BU of 8j1b by Molmil
GSK101 and Ruthenium Red bound state of mTRPV4
Descriptor: N-[(2S)-1-{4-[N-(2,4-dichlorobenzene-1-sulfonyl)-L-seryl]piperazin-1-yl}-4-methyl-1-oxopentan-2-yl]-1-benzothiophene-2-carboxamide, Transient receptor potential cation channel subfamily V member 4, ruthenium(6+) azanide pentaamino(oxido)ruthenium (1/4/2)
Authors:Zhen, W.X, Yang, F.
Deposit date:2023-04-12
Release date:2023-08-09
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.72 Å)
Cite:Structural basis of ligand activation and inhibition in a mammalian TRPV4 ion channel.
Cell Discov, 9, 2023
3H94
DownloadVisualize
BU of 3h94 by Molmil
Crystal structure of the membrane fusion protein CusB from Escherichia coli
Descriptor: Cation efflux system protein cusB, SILVER ION
Authors:Su, C.-C, Yang, F, Long, F, Reyon, D, Routh, M.D, Kuo, D.W, Mokhtari, A.K, Van Ornam, J.D, Rabe, K.L, Hoy, J.A, Lee, Y.J, Rajashankar, K.R, Yu, E.W.
Deposit date:2009-04-30
Release date:2009-08-18
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3.84 Å)
Cite:Crystal structure of the membrane fusion protein CusB from Escherichia coli
J.Mol.Biol., 393, 2009
3HGG
DownloadVisualize
BU of 3hgg by Molmil
Crystal Structure of CmeR Bound to Cholic Acid
Descriptor: CHOLIC ACID, CmeR
Authors:Routh, M.D, Yang, F.
Deposit date:2009-05-13
Release date:2010-06-30
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.57 Å)
Cite:Structural basis for anionic ligand recognition by multidrug binding proteins: Crystal structures of CmeR-bile acid complexes
To be Published
6J3Q
DownloadVisualize
BU of 6j3q by Molmil
Capsid structure of a freshwater cyanophage Siphoviridae Mic1
Descriptor: cement protein, major capsid protein
Authors:Jin, H, Jiang, Y.L, Yang, F, Zhang, J.T, Li, W.F, Zhou, K, Ju, J, Chen, Y, Zhou, C.Z.
Deposit date:2019-01-05
Release date:2019-10-02
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.53 Å)
Cite:Capsid Structure of a Freshwater Cyanophage Siphoviridae Mic1.
Structure, 27, 2019
5Z74
DownloadVisualize
BU of 5z74 by Molmil
Crystal structure of alkaline/neutral invertase InvB from Anabaena sp. PCC 7120 complexed with sucrose
Descriptor: Alr0819 protein, beta-D-fructofuranose-(2-1)-alpha-D-glucopyranose
Authors:Xie, J, Hu, H.X, Cai, K, Yang, F, Jiang, Y.L, Chen, Y, Zhou, C.Z.
Deposit date:2018-01-27
Release date:2018-05-30
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural and enzymatic analyses of Anabaena heterocyst-specific alkaline invertase InvB.
FEBS Lett., 592, 2018

226707

PDB entries from 2024-10-30

PDB statisticsPDBj update infoContact PDBjnumon