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7KOK
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BU of 7kok by Molmil
The crystal structure of Papain-Like Protease of SARS CoV-2, C111S mutant, in complex with PLP_Snyder496 inhibitor
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 5-[(E)-(hydroxyimino)methyl]-2-methyl-N-[(1R)-1-(naphthalen-1-yl)ethyl]benzamide, ACETATE ION, ...
著者Osipiuk, J, Tesar, C, Endres, M, Lisnyak, V, Maki, S, Taylor, C, Zhang, Y, Zhou, Z, Azizi, S.A, Jones, K, Kathayat, R, Snyder, S.A, Dickinson, B.C, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2020-11-09
公開日2020-11-18
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The crystal structure of Papain-Like Protease of SARS CoV-2, C111S mutant, in complex with PLP_Snyder496
to be published
1YZC
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BU of 1yzc by Molmil
The solution structure of a redesigned apocytochrome B562 (Rd-apocyt b562) with the N- and a part of the C-terminal helices unfolded
分子名称: edesigned apo-cytochrome b562
著者Feng, H, Zhou, Z, Bai, Y, Berkeley Structural Genomics Center (BSGC)
登録日2005-02-28
公開日2006-03-28
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献A protein folding pathway with multiple folding intermediates at atomic resolution
Proc.Natl.Acad.Sci.Usa, 102, 2005
6L9F
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BU of 6l9f by Molmil
Crystal structure of TEAD4 in complex with a novel FAM181A peptide
分子名称: ACETATE ION, Protein FAM181A, Transcriptional enhancer factor TEF-3
著者Chen, M, Zhou, Z.
登録日2019-11-09
公開日2019-12-11
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.555 Å)
主引用文献Crystal structure of TEAD4 in complex with a novel FAM181A peptide
To be published
5X07
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BU of 5x07 by Molmil
Crystal structure of FOXA2 DNA binding domain bound to a full consensus DNA site
分子名称: DNA (5'-D(*CP*AP*AP*AP*AP*TP*GP*TP*AP*AP*AP*CP*AP*AP*GP*A)-3'), DNA (5'-D(*TP*CP*TP*TP*GP*TP*TP*TP*AP*CP*AP*TP*TP*TP*TP*G)-3'), Hepatocyte nuclear factor 3-beta
著者Li, J, Guo, M, Zhou, Z, Jiang, L, Chen, X, Qu, L, Wu, D, Chen, Z, Chen, L, Chen, Y.
登録日2017-01-20
公開日2017-08-16
最終更新日2017-09-27
実験手法X-RAY DIFFRACTION (2.796 Å)
主引用文献Structure of the Forkhead Domain of FOXA2 Bound to a Complete DNA Consensus Site
Biochemistry, 56, 2017
5CHL
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BU of 5chl by Molmil
Structural basis of H2A.Z recognition by YL1 histone chaperone component of SRCAP/SWR1 chromatin remodeling complex
分子名称: Histone H2A.Z, Vacuolar protein sorting-associated protein 72 homolog
著者Shan, S, Liang, X, Pan, L, Wu, C, Zhou, Z.
登録日2015-07-10
公開日2016-03-09
最終更新日2017-09-27
実験手法X-RAY DIFFRACTION (1.892 Å)
主引用文献Structural basis of H2A.Z recognition by SRCAP chromatin-remodeling subunit YL1
Nat.Struct.Mol.Biol., 23, 2016
2LY8
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BU of 2ly8 by Molmil
The budding yeast chaperone Scm3 recognizes the partially unfolded dimer of the centromere-specific Cse4/H4 histone variant
分子名称: Budding yeast chaperone Scm3
著者Hong, J, Feng, H, Zhou, Z, Ghirlando, R, Bai, Y.
登録日2012-09-13
公開日2012-12-12
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Identification of Functionally Conserved Regions in the Structure of the Chaperone/CenH3/H4 Complex.
J.Mol.Biol., 425, 2013
4HU8
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BU of 4hu8 by Molmil
Crystal Structure of a Bacterial Ig-like Domain Containing GH10 Xylanase from Termite Gut
分子名称: GH10 Xylanase, GLYCEROL, SULFATE ION
著者Han, Q, Liu, N, Robinson, H, Cao, L, Qian, C, Wang, Q, Xie, L, Ding, H, Wang, Q, Huang, Y, Li, J, Zhou, Z.
登録日2012-11-02
公開日2013-09-18
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Biochemical characterization and crystal structure of a GH10 xylanase from termite gut bacteria reveal a novel structural feature and significance of its bacterial Ig-like domain.
Biotechnol.Bioeng., 110, 2013
6A7U
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BU of 6a7u by Molmil
Crystal structure of histone H2A.Bbd-H2B dimer
分子名称: Histone H2B type 2-E,Histone H2A-Bbd type 2/3
著者Dai, L, Zhou, Z.
登録日2018-07-04
公開日2019-02-27
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structure of the histone heterodimer containing histone variant H2A.Bbd.
Biochem. Biophys. Res. Commun., 503, 2018
6AE8
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BU of 6ae8 by Molmil
Structure insight into histone chaperone Chz1-mediated H2A.Z recognition and replacement
分子名称: BICINE, Histone H2A.Z-specific chaperone CHZ1, Histone H2B.1,Histone H2A.Z
著者Wang, Y.Y, Shan, S, Zhou, Z.
登録日2018-08-03
公開日2019-04-17
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Structural insights into histone chaperone Chz1-mediated H2A.Z recognition and histone replacement.
Plos Biol., 17, 2019
7F5F
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BU of 7f5f by Molmil
SARS-CoV-2 ORF8 S84
分子名称: CALCIUM ION, ORF8 protein
著者Chen, S, Zhou, Z, Chen, X.
登録日2021-06-22
公開日2022-01-19
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.62 Å)
主引用文献Crystal Structures of Bat and Human Coronavirus ORF8 Protein Ig-Like Domain Provide Insights Into the Diversity of Immune Responses.
Front Immunol, 12, 2021
7F8L
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BU of 7f8l by Molmil
Crystal structure of Bat coronavirus RaTG13 ORF8 accessory protein
分子名称: CALCIUM ION, Nonstructural protein NS8
著者Chen, X, Zhou, Z, Chen, S.
登録日2021-07-02
公開日2022-01-19
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.762 Å)
主引用文献Crystal Structures of Bat and Human Coronavirus ORF8 Protein Ig-Like Domain Provide Insights Into the Diversity of Immune Responses.
Front Immunol, 12, 2021
7DFH
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BU of 7dfh by Molmil
Structure of COVID-19 RNA-dependent RNA polymerase bound to ribavirin
分子名称: MAGNESIUM ION, Non-structural protein 7, Non-structural protein 8, ...
著者Li, Z, Zhou, Z, Yu, X.
登録日2020-11-08
公開日2021-11-17
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (2.97 Å)
主引用文献Structural basis for repurpose and design of nucleotide drugs for treating COVID-19
To Be Published
7DFG
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BU of 7dfg by Molmil
Structure of COVID-19 RNA-dependent RNA polymerase bound to favipiravir
分子名称: 6-fluoro-3-oxo-4-(5-O-phosphono-beta-D-ribofuranosyl)-3,4-dihydropyrazine-2-carboxamide, MAGNESIUM ION, Non-structural protein 7, ...
著者Li, Z, Zhou, Z, Yu, X.
登録日2020-11-08
公開日2021-11-17
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献Structural basis for repurpose and design of nucleotide drugs for treating COVID-19
To Be Published
7D4F
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BU of 7d4f by Molmil
Structure of COVID-19 RNA-dependent RNA polymerase bound to suramin
分子名称: 8-(3-(3-aminobenzamido)-4-methylbenzamido)naphthalene-1,3,5-trisulfonic acid, Non-structural protein 7, Non-structural protein 8, ...
著者Li, Z, Yin, W, Zhou, Z, Yu, X, Xu, H.
登録日2020-09-23
公開日2020-11-11
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (2.57 Å)
主引用文献Structural basis for inhibition of the SARS-CoV-2 RNA polymerase by suramin.
Nat.Struct.Mol.Biol., 28, 2021
6KBB
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BU of 6kbb by Molmil
Role of the DEF/Y motif of Swc5 in histone H2A.Z deposition
分子名称: Histone H2A type 1-D, Histone H2B type 2-E, SWR1-complex protein 5
著者Huang, Y, Zhou, Z.
登録日2019-06-24
公開日2020-01-29
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.365 Å)
主引用文献Role of a DEF/Y motif in histone H2A-H2B recognition and nucleosome editing.
Proc.Natl.Acad.Sci.USA, 117, 2020
7X5B
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BU of 7x5b by Molmil
Crystal structure of RuvB
分子名称: ADENOSINE-5'-DIPHOSPHATE, Holliday junction ATP-dependent DNA helicase RuvB
著者Lin, Z, Qu, Q, Zhang, X, Zhou, Z, Dai, L.
登録日2022-03-04
公開日2023-03-08
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.16 Å)
主引用文献Cryo-EM structure of the RuvAB-Holliday junction intermediate complex from Pseudomonas aeruginosa.
Front Plant Sci, 14, 2023
7X5A
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BU of 7x5a by Molmil
CryoEM structure of RuvA-Holliday junction complex
分子名称: DNA (26-MER), Holliday junction ATP-dependent DNA helicase RuvA
著者Lin, Z, Qu, Q, Zhang, X, Zhou, Z.
登録日2022-03-04
公開日2023-03-08
最終更新日2023-09-20
実験手法ELECTRON MICROSCOPY (3.01 Å)
主引用文献Cryo-EM structure of the RuvAB-Holliday junction intermediate complex from Pseudomonas aeruginosa.
Front Plant Sci, 14, 2023
7X7Q
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BU of 7x7q by Molmil
CryoEM structure of RuvA-RuvB-Holliday junction complex
分子名称: DNA (26-MER), DNA (40-MER), Holliday junction ATP-dependent DNA helicase RuvA, ...
著者Lin, Z, Qu, Q, Zhang, X, Zhou, Z.
登録日2022-03-10
公開日2023-03-15
最終更新日2023-09-20
実験手法ELECTRON MICROSCOPY (7.02 Å)
主引用文献Cryo-EM structure of the RuvAB-Holliday junction intermediate complex from Pseudomonas aeruginosa.
Front Plant Sci, 14, 2023
7X7P
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BU of 7x7p by Molmil
CryoEM structure of dsDNA-RuvB-RuvA domain3 complex
分子名称: DNA, Holliday junction ATP-dependent DNA helicase RuvA, Holliday junction ATP-dependent DNA helicase RuvB
著者Lin, Z, Qu, Q, Zhang, X, Zhou, Z.
登録日2022-03-10
公開日2023-03-15
最終更新日2023-09-20
実験手法ELECTRON MICROSCOPY (7.02 Å)
主引用文献Cryo-EM structure of the RuvAB-Holliday junction intermediate complex from Pseudomonas aeruginosa.
Front Plant Sci, 14, 2023
7WLP
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BU of 7wlp by Molmil
Epstein-Barr virus protein BKRF4 restricts nucleosome assembly to suppress host antiviral responses
分子名称: Histone H2B type 1-O,Histone H2A type 1-D, Tegument protein BKRF4
著者Chen, J, Shan, S, Zhou, Z.
登録日2022-01-13
公開日2022-11-16
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.29 Å)
主引用文献Epstein-Barr virus protein BKRF4 restricts nucleosome assembly to suppress host antiviral responses.
Proc.Natl.Acad.Sci.USA, 119, 2022
7DLX
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BU of 7dlx by Molmil
crystal structure of H2AM4>Z-H2B
分子名称: Histone H2B,Histone H2A
著者Dai, L.C, Zhou, Z.
登録日2020-11-30
公開日2021-06-16
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.395 Å)
主引用文献Recognition of the inherently unstable H2A nucleosome by Swc2 is a major determinant for unidirectional H2A.Z exchange.
Cell Rep, 35, 2021
7WLD
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BU of 7wld by Molmil
Cryo-EM structure of the human glycosylphosphatidylinositol transamidase complex at 2.53 Angstrom resolution
分子名称: (4S,7R)-7-[(hexadecanoyloxy)methyl]-4-hydroxy-N,N,N-trimethyl-4,9-dioxo-3,5,8-trioxa-4lambda~5~-phosphahexacosan-1-aminium, 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Xu, Y, Li, T, Luo, Y, Chao, Y, Jia, G, Zhou, Z, Su, Z, Qu, Q, Li, D.
登録日2022-01-13
公開日2022-04-27
最終更新日2022-06-01
実験手法ELECTRON MICROSCOPY (2.53 Å)
主引用文献Molecular insights into biogenesis of glycosylphosphatidylinositol anchor proteins.
Nat Commun, 13, 2022
7E8I
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BU of 7e8i by Molmil
Structural insight into BRCA1-BARD1 complex recruitment to damaged chromatin
分子名称: BRCA1-associated RING domain protein 1, DNA (145-MER), Histone H2A, ...
著者Dai, Y, Dai, L, Zhou, Z.
登録日2021-03-01
公開日2021-06-30
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Structural insight into BRCA1-BARD1 complex recruitment to damaged chromatin.
Mol.Cell, 81, 2021
7XPX
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BU of 7xpx by Molmil
Cryo-EM structure of the histone methyltransferase SET8 bound to H4K20Ecx-nucleosome
分子名称: DNA (145-MER), Histone H2A, Histone H2B 1.1, ...
著者Shi, L.X, Zhou, Z.
登録日2022-05-06
公開日2022-06-01
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Structural basis of nucleosomal H4K20 methylation by methyltransferase SET8.
Faseb J., 36, 2022
5GT5
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BU of 5gt5 by Molmil
Structural basis of the specific activity and thermostability of pectate lyase (pelN) from Paenibacillus sp. 0602
分子名称: Pectate lyase
著者Zhou, Z.P, Liu, Y, Song, J.N.
登録日2016-08-18
公開日2017-10-25
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.449 Å)
主引用文献Structure-based engineering of a pectate lyase with improved specific activity for ramie degumming.
Appl. Microbiol. Biotechnol., 101, 2017

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