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PDB: 87 results

8GVK
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BU of 8gvk by Molmil
Cryo-EM structure of streptavidin
Descriptor: Streptavidin
Authors:Liu, N, Zheng, L.M, Peng, H.L, Wang, H.W.
Deposit date:2022-09-15
Release date:2022-11-09
Last modified:2023-01-25
Method:ELECTRON MICROSCOPY (2.2 Å)
Cite:Uniform thin ice on ultraflat graphene for high-resolution cryo-EM.
Nat.Methods, 20, 2023
8WVB
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BU of 8wvb by Molmil
Crystal structure of Lsd18 mutant S195M
Descriptor: CHLORIDE ION, FLAVIN-ADENINE DINUCLEOTIDE, Putative epoxidase LasC
Authors:Liu, N, Xiao, H.L, Chen, X.
Deposit date:2023-10-23
Release date:2023-12-13
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Simultaneous Improvement in the Thermostability and Catalytic Activity of Epoxidase Lsd18 for the Synthesis of Lasalocid A.
Int J Mol Sci, 24, 2023
8WVF
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BU of 8wvf by Molmil
Crystal structure of Lsd18 mutant T189M and S195M
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Putative epoxidase LasC
Authors:Liu, N, Xiao, H.L, Chen, X.
Deposit date:2023-10-23
Release date:2023-12-13
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (3.757 Å)
Cite:Simultaneous Improvement in the Thermostability and Catalytic Activity of Epoxidase Lsd18 for the Synthesis of Lasalocid A.
Int J Mol Sci, 24, 2023
8H2H
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BU of 8h2h by Molmil
Cryo-EM structure of a Group II Intron Complexed with its Reverse Transcriptase
Descriptor: Group II intron-encoded protein LtrA, LtrB, RNA (5'-R(P*CP*AP*CP*AP*UP*CP*CP*AP*UP*AP*AP*C)-3')
Authors:Liu, N, Dong, X.L, Qu, G.S, Wang, J, Wang, H.W, Belfort, M.
Deposit date:2022-10-06
Release date:2022-11-23
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Functionalized graphene grids with various charges for single-particle cryo-EM.
Nat Commun, 13, 2022
7DL0
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BU of 7dl0 by Molmil
The mutant E310G/A314Y of 3,5-DAHDHcca complex with NADPH
Descriptor: 1,2-ETHANEDIOL, 3,5-diaminohexanoate dehydrogenase, CHLORIDE ION, ...
Authors:Liu, N, Wu, L, Zhu, D.M, Zhou, J.H.
Deposit date:2020-11-25
Release date:2021-09-29
Method:X-RAY DIFFRACTION (2.17 Å)
Cite:Crystal Structures and Catalytic Mechanism of l-erythro-3,5-Diaminohexanoate Dehydrogenase and Rational Engineering for Asymmetric Synthesis of beta-Amino Acids.
Angew.Chem.Int.Ed.Engl., 60, 2021
7DL7
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BU of 7dl7 by Molmil
The wild-type structure of 3,5-DAHDHcca
Descriptor: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 3,5-diaminohexanoate dehydrogenase, ...
Authors:Liu, N, Wu, L, Zhu, D.M, Zhou, J.H.
Deposit date:2020-11-26
Release date:2021-09-29
Method:X-RAY DIFFRACTION (2.30065823 Å)
Cite:Crystal Structures and Catalytic Mechanism of l-erythro-3,5-Diaminohexanoate Dehydrogenase and Rational Engineering for Asymmetric Synthesis of beta-Amino Acids.
Angew.Chem.Int.Ed.Engl., 60, 2021
7DL3
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BU of 7dl3 by Molmil
The structure of 3,5-DAHDHcca complex with NADPH
Descriptor: 3,5-diaminohexanoate dehydrogenase, CHLORIDE ION, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Liu, N, Wu, L, Zhu, D.M, Zhou, J.H.
Deposit date:2020-11-25
Release date:2021-09-29
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.84606934 Å)
Cite:Crystal Structures and Catalytic Mechanism of l-erythro-3,5-Diaminohexanoate Dehydrogenase and Rational Engineering for Asymmetric Synthesis of beta-Amino Acids.
Angew.Chem.Int.Ed.Engl., 60, 2021
7DL1
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BU of 7dl1 by Molmil
The mutant E310G/G323S structure of 3,5-DAHDHcca complex with NADPH
Descriptor: 3,5-diaminohexanoate dehydrogenase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Liu, N, Wu, L, Zhu, D.M, Zhou, J.H.
Deposit date:2020-11-25
Release date:2021-09-29
Method:X-RAY DIFFRACTION (2.72 Å)
Cite:Crystal Structures and Catalytic Mechanism of l-erythro-3,5-Diaminohexanoate Dehydrogenase and Rational Engineering for Asymmetric Synthesis of beta-Amino Acids.
Angew.Chem.Int.Ed.Engl., 60, 2021
7XGY
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BU of 7xgy by Molmil
cryo-EM structure of hemoglobin
Descriptor: Hemoglobin subunit alpha, Hemoglobin subunit beta, PROTOPORPHYRIN IX CONTAINING FE
Authors:Liu, N, Wang, H.W.
Deposit date:2022-04-07
Release date:2022-11-09
Last modified:2023-05-24
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Uniform thin ice on ultraflat graphene for high-resolution cryo-EM.
Nat.Methods, 20, 2023
7YIM
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BU of 7yim by Molmil
Cryo-EM structure of human Alpha-fetoprotein
Descriptor: Alpha-fetoprotein
Authors:Liu, N, Liu, K, Wu, C, Liu, Z, Li, M, Wang, J, Wang, H.W.
Deposit date:2022-07-17
Release date:2023-01-18
Last modified:2023-01-25
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:Uniform thin ice on ultraflat graphene for high-resolution cryo-EM.
Nat.Methods, 20, 2023
8IPG
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BU of 8ipg by Molmil
Structure of HP101/N44
Descriptor: Env polyprotein (Fragment), HP101
Authors:Liu, N, Qin, B.
Deposit date:2023-03-14
Release date:2024-03-20
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:Structure of HP101/N44
To Be Published
7D0F
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BU of 7d0f by Molmil
cryo-EM structure of a pre-catalytic group II intron RNP
Descriptor: Group II intron-encoded protein LtrA, RNA (738-MER)
Authors:Liu, N, Dong, X.L, Hu, C.X, Zeng, J.W, Wang, J.W, Wang, J, Wang, H.W, Belfort, M.
Deposit date:2020-09-10
Release date:2020-09-30
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (5 Å)
Cite:Exon and protein positioning in a pre-catalytic group II intron RNP primed for splicing.
Nucleic Acids Res., 48, 2020
7D0G
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BU of 7d0g by Molmil
Cryo-EM structure of a pre-catalytic group II intron
Descriptor: Group II intron-encoded protein LtrA, RNA (714-MER)
Authors:Liu, N, Dong, X.L, Hu, C.X, Zeng, J.W, Wang, J.W, Wang, J, Wang, H.W, Belfort, M.
Deposit date:2020-09-10
Release date:2020-09-30
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (5 Å)
Cite:Exon and protein positioning in a pre-catalytic group II intron RNP primed for splicing.
Nucleic Acids Res., 48, 2020
7D1A
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BU of 7d1a by Molmil
cryo-EM structure of a group II intron RNP complexed with its reverse transcriptase
Descriptor: Group II intron-encoded protein LtrA, RNA (5'-R(P*CP*AP*CP*AP*UP*CP*CP*AP*UP*AP*AP*C)-3'), RNA (692-MER)
Authors:Liu, N, Dong, X.L, Hu, C.X, Zeng, J.W, Wang, J.W, Wang, J, Wang, H.W, Belfort, M.
Deposit date:2020-09-14
Release date:2020-10-21
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Exon and protein positioning in a pre-catalytic group II intron RNP primed for splicing.
Nucleic Acids Res., 48, 2020
7EG4
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BU of 7eg4 by Molmil
Cryo-EM structure of nauclefine-induced PDE3A-SLFN12 complex
Descriptor: MAGNESIUM ION, Parvine, Schlafen family member 12, ...
Authors:Liu, N, Chen, J, Wang, X.D, Wang, H.W.
Deposit date:2021-03-24
Release date:2021-09-29
Last modified:2022-05-25
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structure of PDE3A-SLFN12 complex and structure-based design for a potent apoptosis inducer of tumor cells.
Nat Commun, 12, 2021
7EG0
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BU of 7eg0 by Molmil
Cryo-EM structure of anagrelide-induced PDE3A-SLFN12 complex
Descriptor: 6,7-bis(chloranyl)-3,5-dihydro-1H-imidazo[2,1-b]quinazolin-2-one, MAGNESIUM ION, Schlafen family member 12, ...
Authors:Liu, N, Chen, J, Wang, X.D, Wang, H.W.
Deposit date:2021-03-23
Release date:2021-09-29
Last modified:2022-05-25
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structure of PDE3A-SLFN12 complex and structure-based design for a potent apoptosis inducer of tumor cells.
Nat Commun, 12, 2021
7EG1
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BU of 7eg1 by Molmil
Cryo-EM structure of DNMDP-induced PDE3A-SLFN12 complex
Descriptor: (4~{R})-3-[4-(diethylamino)-3-[oxidanyl(oxidanylidene)-$l^{4}-azanyl]phenyl]-4-methyl-4,5-dihydro-1~{H}-pyridazin-6-one, MAGNESIUM ION, Schlafen family member 12, ...
Authors:Liu, N, Chen, J, Wang, X.D, Wang, H.W.
Deposit date:2021-03-23
Release date:2021-11-03
Last modified:2022-05-25
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structure of PDE3A-SLFN12 complex and structure-based design for a potent apoptosis inducer of tumor cells.
Nat Commun, 12, 2021
1C94
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BU of 1c94 by Molmil
REVERSING THE SEQUENCE OF THE GCN4 LEUCINE ZIPPER DOES NOT AFFECT ITS FOLD.
Descriptor: RETRO-GCN4 LEUCINE ZIPPER
Authors:Mittl, P.R.E, Deillon, C.A, Sargent, D, Liu, N, Klauser, S, Thomas, R.M, Gutte, B, Gruetter, M.G.
Deposit date:1999-07-30
Release date:2000-03-22
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:The retro-GCN4 leucine zipper sequence forms a stable three-dimensional structure.
Proc.Natl.Acad.Sci.USA, 97, 2000
5N98
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BU of 5n98 by Molmil
Crystal Structure of Drosophila DHX36 helicase in complex with TAGGGTTTT
Descriptor: CG9323, isoform A, DNA (5'-D(P*TP*AP*GP*GP*GP*TP*TP*TP*T)-3'), ...
Authors:Chen, W.-F, Rety, S, Guo, H.-L, Wu, W.-Q, Liu, N.-N, Liu, Q.-W, Dai, Y.-X, Xi, X.-G.
Deposit date:2017-02-24
Release date:2018-03-14
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.756 Å)
Cite:Molecular Mechanistic Insights into Drosophila DHX36-Mediated G-Quadruplex Unfolding: A Structure-Based Model.
Structure, 26, 2018
5N94
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BU of 5n94 by Molmil
Crystal Structure of Drosophila DHX36 helicase in complex with polyU
Descriptor: CG9323, isoform A, RNA (5'-R(P*UP*UP*UP*UP*UP*UP*UP*U)-3')
Authors:Chen, W.-F, Rety, S, Hai-Lei Guo, H.-L, Wu, W.-Q, Liu, N.-N, Liu, Q.-W, Dai, Y.-X, Xi, X.-G.
Deposit date:2017-02-24
Release date:2018-03-14
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.428 Å)
Cite:Molecular Mechanistic Insights into Drosophila DHX36-Mediated G-Quadruplex Unfolding: A Structure-Based Model.
Structure, 26, 2018
5N9D
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BU of 5n9d by Molmil
Crystal Structure of Drosophila DHX36 helicase in complex with GGGTTAGGGT
Descriptor: CG9323, isoform A, DNA (5'-D(P*GP*GP*GP*TP*TP*AP*GP*GP*GP*T)-3')
Authors:Chen, W.-F, Rety, S, Guo, H.-L, Wu, W.-Q, Liu, N.-N, Liu, Q.-W, Dai, Y.-X, Xi, X.-G.
Deposit date:2017-02-24
Release date:2018-03-14
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.71 Å)
Cite:Molecular Mechanistic Insights into Drosophila DHX36-Mediated G-Quadruplex Unfolding: A Structure-Based Model.
Structure, 26, 2018
5N90
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BU of 5n90 by Molmil
Crystal Structure of Drosophila DHX36 helicase in complex with TTGTGGTGT
Descriptor: CG9323, isoform A, DNA (5'-D(P*TP*TP*GP*TP*GP*GP*TP*GP*T)-3'), ...
Authors:Chen, W.-F, Rety, S, Guo, H.-L, Wu, W.-Q, Liu, N.-N, Liu, Q.-W, Dai, Y.-X, Xi, X.-G.
Deposit date:2017-02-24
Release date:2018-03-14
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.069 Å)
Cite:Molecular Mechanistic Insights into Drosophila DHX36-Mediated G-Quadruplex Unfolding: A Structure-Based Model.
Structure, 26, 2018
5N8S
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BU of 5n8s by Molmil
Crystal Structure of Drosophila DHX36 helicase in complex with polyT
Descriptor: CG9323, isoform A, DNA (5'-D(P*TP*TP*TP*TP*TP*TP*TP*TP*TP*T)-3'), ...
Authors:Chen, W.-F, Rety, S, Hai-Lei Guo, H.-L, Wu, W.-Q, Liu, N.-N, Liu, Q.-W, Dai, Y.-X, Xi, X.-G.
Deposit date:2017-02-24
Release date:2018-03-14
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.88 Å)
Cite:Molecular Mechanistic Insights into Drosophila DHX36-Mediated G-Quadruplex Unfolding: A Structure-Based Model.
Structure, 26, 2018
5N96
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BU of 5n96 by Molmil
Crystal Structure of Drosophila DHX36 helicase in complex with AGGGTTTTTT
Descriptor: CG9323, isoform A, DNA (5'-D(P*AP*GP*GP*GP*TP*TP*TP*TP*TP*T)-3'), ...
Authors:Chen, W.-F, Rety, S, Guo, H.-L, Wu, W.-Q, Liu, N.-N, Liu, Q.-W, Dai, Y.-X, Xi, X.-G.
Deposit date:2017-02-24
Release date:2018-03-14
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.716 Å)
Cite:Molecular Mechanistic Insights into Drosophila DHX36-Mediated G-Quadruplex Unfolding: A Structure-Based Model.
Structure, 26, 2018
5N8R
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BU of 5n8r by Molmil
Crystal Structure of Drosophilia DHX36 helicase in complex with GAGCACTGC
Descriptor: CG9323, isoform A, DNA (5'-D(P*GP*AP*GP*CP*AP*CP*TP*GP*C)-3')
Authors:Chen, W.-F, Rety, S, Hai-Lei Guo, H.-L, Wu, W.-Q, Liu, N.-N, Liu, Q.-W, Dai, Y.-X, Xi, X.-G.
Deposit date:2017-02-24
Release date:2018-03-14
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Molecular Mechanistic Insights into Drosophila DHX36-Mediated G-Quadruplex Unfolding: A Structure-Based Model.
Structure, 26, 2018

 

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