Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
3IXW
DownloadVisualize
BU of 3ixw by Molmil
Scorpion Hemocyanin activated state pseudo atomic model built based on cryo-EM density map
分子名称: Hemocyanin AA6 chain
著者Cong, Y, Zhang, Q, Woolford, D, Schweikardt, T, Khant, H, Ludtke, S, Chiu, W, Decker, H.
登録日2009-02-13
公開日2009-06-02
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (8 Å)
主引用文献Structural Mechanism of SDS-Induced Enzyme Activity of Scorpion Hemocyanin Revealed by Electron Cryomicroscopy.
Structure, 17, 2009
6E3Y
DownloadVisualize
BU of 6e3y by Molmil
Cryo-EM structure of the active, Gs-protein complexed, human CGRP receptor
分子名称: Calcitonin gene-related peptide 1, Calcitonin gene-related peptide type 1 receptor, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
著者Liang, Y.L, Khoshouei, M, Deganutti, G, Glukhova, A, Koole, C, Peat, T.S, Radjainia, M, Plitzko, J.M, Baumeister, W, Miller, L.J, Hay, D.L, Christopoulos, A, Reynolds, C.A, Wootten, D, Sexton, P.M.
登録日2018-07-16
公開日2018-09-19
最終更新日2020-01-15
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Cryo-EM structure of the active, Gs-protein complexed, human CGRP receptor.
Nature, 561, 2018
5UZ7
DownloadVisualize
BU of 5uz7 by Molmil
Volta phase plate cryo-electron microscopy structure of a calcitonin receptor-heterotrimeric Gs protein complex
分子名称: Calcitonin receptor, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
著者Liang, Y.L, Khoshouei, M, Radjainia, M, Zhang, Y, Glukhova, A, Tarrasch, J, Thal, D.M, Furness, S.G.B, Christopoulos, G, Coudrat, T, Danev, R, Baumeister, W, Miller, L.J, Christopoulos, A, Kobilka, B.K, Wootten, D, Skiniotis, G, Sexton, P.M.
登録日2017-02-24
公開日2017-05-03
最終更新日2018-07-18
実験手法ELECTRON MICROSCOPY (4.1 Å)
主引用文献Phase-plate cryo-EM structure of a class B GPCR-G-protein complex.
Nature, 546, 2017
7KI0
DownloadVisualize
BU of 7ki0 by Molmil
Semaglutide-bound Glucagon-Like Peptide-1 (GLP-1) Receptor in Complex with Gs protein
分子名称: 17-amino-10-oxo-3,6,12,15-tetraoxa-9-azaheptadecan-1-oic acid, Glucagon-like peptide 1 receptor, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
著者Zhang, X, Belousoff, M.J, Danev, R, Sexton, P.M, Wootten, D.
登録日2020-10-22
公開日2021-08-04
実験手法ELECTRON MICROSCOPY (2.5 Å)
主引用文献Structure and dynamics of semaglutide- and taspoglutide-bound GLP-1R-Gs complexes.
Cell Rep, 36, 2021
7KI1
DownloadVisualize
BU of 7ki1 by Molmil
Taspoglutide-bound Glucagon-Like Peptide-1 (GLP-1) Receptor in Complex with Gs Protein
分子名称: Glucagon-like peptide 1 receptor, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
著者Zhang, X, Belousoff, M.J, Danev, R, Sexton, P.M, Wootten, D.
登録日2020-10-22
公開日2021-08-04
実験手法ELECTRON MICROSCOPY (2.5 Å)
主引用文献Structure and dynamics of semaglutide- and taspoglutide-bound GLP-1R-Gs complexes.
Cell Rep, 36, 2021
7LCI
DownloadVisualize
BU of 7lci by Molmil
PF 06882961 bound to the glucagon-like peptide-1 receptor (GLP-1R):Gs complex
分子名称: 2-[(4-{6-[(4-cyano-2-fluorophenyl)methoxy]pyridin-2-yl}piperidin-1-yl)methyl]-1-{[(2S)-oxetan-2-yl]methyl}-1H-benzimidazole-6-carboxylic acid, Glucagon-like peptide 1 receptor, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
著者Belousoff, M.J, Johnson, R.M, Drulyte, I, Yu, L, Kotecha, A, Danev, R, Wootten, D, Zhang, X, Sexton, P.M.
登録日2021-01-11
公開日2021-01-20
最終更新日2021-09-15
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Evolving cryo-EM structural approaches for GPCR drug discovery.
Structure, 29, 2021
7LCJ
DownloadVisualize
BU of 7lcj by Molmil
PF 06882961 bound to the glucagon-like peptide-1 receptor (GLP-1R):Gs complex
分子名称: 2-[(4-{6-[(4-cyano-2-fluorophenyl)methoxy]pyridin-2-yl}piperidin-1-yl)methyl]-1-{[(2S)-oxetan-2-yl]methyl}-1H-benzimidazole-6-carboxylic acid, Glucagon-like peptide 1 receptor
著者Belousoff, M.J, Johnson, R.M, Drulyte, I, Yu, L, Kotecha, A, Danev, R, Wootten, D, Zhang, X, Sexton, P.M.
登録日2021-01-11
公開日2021-01-20
最終更新日2021-09-15
実験手法ELECTRON MICROSCOPY (2.82 Å)
主引用文献Evolving cryo-EM structural approaches for GPCR drug discovery.
Structure, 29, 2021
7LCK
DownloadVisualize
BU of 7lck by Molmil
PF 06882961 bound to the glucagon-like peptide-1 receptor (GLP-1R)
分子名称: 2-[(4-{6-[(4-cyano-2-fluorophenyl)methoxy]pyridin-2-yl}piperidin-1-yl)methyl]-1-{[(2S)-oxetan-2-yl]methyl}-1H-benzimidazole-6-carboxylic acid, Glucagon-like peptide 1 receptor
著者Belousoff, M.J, Johnson, R.M, Drulyte, I, Yu, L, Kotecha, A, Danev, R, Wootten, D, Zhang, X, Sexton, P.M.
登録日2021-01-11
公開日2021-01-20
最終更新日2021-09-15
実験手法ELECTRON MICROSCOPY (3.24 Å)
主引用文献Evolving cryo-EM structural approaches for GPCR drug discovery.
Structure, 29, 2021
6OWN
DownloadVisualize
BU of 6own by Molmil
Crystal structure of Msm DnaB1 intein splicing domain bound with zinc
分子名称: Replicative DNA helicase, ZINC ION
著者Bacot-Davis, V.R, Belfort, M, Lennon, C.
登録日2019-05-10
公開日2020-05-13
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Conditional DnaB Protein Splicing Is Reversibly Inhibited by Zinc in Mycobacteria.
Mbio, 11, 2020
4EVN
DownloadVisualize
BU of 4evn by Molmil
Crystal Structure of Fab CR6261 (somatic heavy chain with germline-reverted light chain)
分子名称: Fab Heavy Chain, Fab Lambda Light Chain
著者Whittle, J.R.R.
登録日2012-04-26
公開日2012-08-29
最終更新日2017-11-15
実験手法X-RAY DIFFRACTION (2.851 Å)
主引用文献Structural and genetic basis for development of broadly neutralizing influenza antibodies.
Nature, 489, 2012
1DE0
DownloadVisualize
BU of 1de0 by Molmil
MODULATING THE MIDPOINT POTENTIAL OF THE [4FE-4S] CLUSTER OF THE NITROGENASE FE PROTEIN
分子名称: IRON/SULFUR CLUSTER, NITROGENASE IRON PROTEIN
著者Jang, S.B, Seefeldt, L.C, Peters, J.W.
登録日1999-11-12
公開日2000-02-09
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Modulating the midpoint potential of the [4Fe-4S] cluster of the nitrogenase Fe protein.
Biochemistry, 39, 2000
1G5P
DownloadVisualize
BU of 1g5p by Molmil
NITROGENASE IRON PROTEIN FROM AZOTOBACTER VINELANDII
分子名称: IRON/SULFUR CLUSTER, NITROGENASE IRON PROTEIN
著者Strop, P, Takahara, P.M, Chiu, H.J, Angove, H.C, Burgess, B.K, Rees, D.C.
登録日2000-11-01
公開日2001-01-31
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of the all-ferrous [4Fe-4S]0 form of the nitrogenase iron protein from Azotobacter vinelandii.
Biochemistry, 40, 2001
5LC1
DownloadVisualize
BU of 5lc1 by Molmil
L-threonine dehydrogenase from Trypanosoma brucei with NAD and the inhibitor pyruvate bound.
分子名称: ACETATE ION, BETA-MERCAPTOETHANOL, L-threonine 3-dehydrogenase, ...
著者Erskine, P.T, Adjogatse, E, Wood, S.P, Cooper, J.B.
登録日2016-06-18
公開日2016-07-27
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure and function of L-threonine-3-dehydrogenase from the parasitic protozoan Trypanosoma brucei revealed by X-ray crystallography and geometric simulations.
Acta Crystallogr D Struct Biol, 74, 2018
3KTT
DownloadVisualize
BU of 3ktt by Molmil
Atomic model of bovine TRiC CCT2(beta) subunit derived from a 4.0 Angstrom cryo-EM map
分子名称: T-complex protein 1 subunit beta
著者Cong, Y, Baker, M.L, Ludtke, S.J, Frydman, J, Chiu, W.
登録日2009-11-25
公開日2010-03-16
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献4.0-A resolution cryo-EM structure of the mammalian chaperonin TRiC/CCT reveals its unique subunit arrangement.
Proc.Natl.Acad.Sci.USA, 107, 2010
6X1A
DownloadVisualize
BU of 6x1a by Molmil
Non peptide agonist PF-06882961, bound to Glucagon-Like peptide-1 (GLP-1) Receptor
分子名称: 2-[(4-{6-[(4-cyano-2-fluorophenyl)methoxy]pyridin-2-yl}piperidin-1-yl)methyl]-1-{[(2S)-oxetan-2-yl]methyl}-1H-benzimidazole-6-carboxylic acid, Glucagon-like peptide 1 receptor, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
著者Belousoff, M.J, Zhang, X, Danev, R.
登録日2020-05-18
公開日2020-09-09
最終更新日2020-11-18
実験手法ELECTRON MICROSCOPY (2.5 Å)
主引用文献Differential GLP-1R Binding and Activation by Peptide and Non-peptide Agonists.
Mol.Cell, 80, 2020
6X19
DownloadVisualize
BU of 6x19 by Molmil
Non peptide agonist CHU-128, bound to Glucagon-Like peptide-1 (GLP-1) Receptor
分子名称: 3-{(1S)-1-[5-(2,2-dimethylmorpholin-4-yl)-2-{(4S)-2-(4-fluoro-3,5-dimethylphenyl)-3-[3-(4-fluoro-1-methyl-1H-indazol-5-yl)-2-oxo-2,3-dihydro-1H-imidazol-1-yl]-4-methyl-2,4,6,7-tetrahydro-5H-pyrazolo[4,3-c]pyridine-5-carbonyl}-1H-indol-1-yl]butyl}-1,2,4-oxadiazol-5(4H)-one, Glucagon-like peptide 1 receptor, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
著者Belousoff, M.J, Zhang, X, Danev, R.
登録日2020-05-18
公開日2020-09-09
最終更新日2020-11-18
実験手法ELECTRON MICROSCOPY (2.1 Å)
主引用文献Differential GLP-1R Binding and Activation by Peptide and Non-peptide Agonists.
Mol.Cell, 80, 2020
6X18
DownloadVisualize
BU of 6x18 by Molmil
GLP-1 peptide hormone bound to Glucagon-Like peptide-1 (GLP-1) Receptor
分子名称: Glucagon, Glucagon-like peptide 1 receptor, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
著者Belousoff, M.J, Zhang, X, Danev, R.
登録日2020-05-18
公開日2020-09-09
最終更新日2020-11-18
実験手法ELECTRON MICROSCOPY (2.1 Å)
主引用文献Differential GLP-1R Binding and Activation by Peptide and Non-peptide Agonists.
Mol.Cell, 80, 2020
8F2A
DownloadVisualize
BU of 8f2a by Molmil
Human Amylin3 Receptor in complex with Gs and Pramlintide analogue peptide San385 (Cluster 5 conformation)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Calcitonin receptor, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
著者Cao, J, Sexton, P.M, Wootten, D.L, Radostin, D.
登録日2022-11-07
公開日2023-08-02
最終更新日2024-02-14
実験手法ELECTRON MICROSCOPY (2.2 Å)
主引用文献Structural insight into selectivity of amylin and calcitonin receptor agonists.
Nat.Chem.Biol., 20, 2024
8U8F
DownloadVisualize
BU of 8u8f by Molmil
GPR3 Orphan G-coupled Protein Receptor in complex with Dominant Negative Gs.
分子名称: G-protein coupled receptor 3, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
著者Russell, I.C, Belousoff, M.J, Sexton, P.
登録日2023-09-17
公開日2024-03-06
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (3.49 Å)
主引用文献Lipid-Dependent Activation of the Orphan G Protein-Coupled Receptor, GPR3.
Biochemistry, 63, 2024
6FMC
DownloadVisualize
BU of 6fmc by Molmil
Neuropilin1-b1 domain in complex with EG01377, 0.9 Angstrom structure
分子名称: (2~{S})-2-[[3-[[5-[4-(aminomethyl)phenyl]-1-benzofuran-7-yl]sulfonylamino]thiophen-2-yl]carbonylamino]-5-carbamimidamido-pentanoic acid, Neuropilin-1
著者Yelland, T, Djordjevic, S, Fotinou, K, Selwood, D, Zachary, I, Frankel, P.
登録日2018-01-30
公開日2018-10-17
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (0.9 Å)
主引用文献Small Molecule Neuropilin-1 Antagonists Combine Antiangiogenic and Antitumor Activity with Immune Modulation through Reduction of Transforming Growth Factor Beta (TGF beta ) Production in Regulatory T-Cells.
J. Med. Chem., 61, 2018
6FMF
DownloadVisualize
BU of 6fmf by Molmil
Neuropilin-1 b1 domain in complex with EG01377; 2.8 Angstrom structure
分子名称: (2~{S})-2-[[3-[[5-[4-(aminomethyl)phenyl]-1-benzofuran-7-yl]sulfonylamino]thiophen-2-yl]carbonylamino]-5-carbamimidamido-pentanoic acid, Neuropilin-1, trifluoroacetic acid
著者Yelland, T, Djordjevic, S, Selwood, D, Zachary, I, Frankel, P.
登録日2018-01-31
公開日2018-10-17
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.811 Å)
主引用文献Small Molecule Neuropilin-1 Antagonists Combine Antiangiogenic and Antitumor Activity with Immune Modulation through Reduction of Transforming Growth Factor Beta (TGF beta ) Production in Regulatory T-Cells.
J. Med. Chem., 61, 2018
9AUC
DownloadVisualize
BU of 9auc by Molmil
Human Amylin1 Receptor in Complex with Gs and human Calcitonin Gene-Related Peptide
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CHOLESTEROL HEMISUCCINATE, Calcitonin gene-related peptide 1, ...
著者Cao, J, Belousoff, M.J, Wootten, D.L, Sexton, P.M.
登録日2024-02-28
公開日2024-04-24
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (2.4 Å)
主引用文献Cryo-EM Structure of the Human Amylin 1 Receptor in Complex with CGRP and Gs Protein.
Biochemistry, 63, 2024
5L9A
DownloadVisualize
BU of 5l9a by Molmil
L-threonine dehydrogenase from trypanosoma brucei.
分子名称: ACETATE ION, L-threonine 3-dehydrogenase
著者Erskine, P.T, Cooper, J.B, Adjogatse, E, Kelly, J, Wood, S.P.
登録日2016-06-09
公開日2016-06-22
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Structure and function of L-threonine-3-dehydrogenase from the parasitic protozoan Trypanosoma brucei revealed by X-ray crystallography and geometric simulations.
Acta Crystallogr D Struct Biol, 74, 2018
8F2B
DownloadVisualize
BU of 8f2b by Molmil
Amylin 3 Receptor in complex with Gs and Pramlintide analogue peptide San45
分子名称: (2S)-2-{[(1R)-1-hydroxyhexadecyl]oxy}-3-{[(1R)-1-hydroxyoctadecyl]oxy}propyl 2-(trimethylammonio)ethyl phosphate, 2-acetamido-2-deoxy-beta-D-glucopyranose, CHOLESTEROL HEMISUCCINATE, ...
著者Cao, J, Sexton, P.M, Wootten, D.L, Belousoff, M.J.
登録日2022-11-07
公開日2023-08-02
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (2 Å)
主引用文献Structural insight into selectivity of amylin and calcitonin receptor agonists.
Nat.Chem.Biol., 20, 2024
8F0J
DownloadVisualize
BU of 8f0j by Molmil
Calcitonin Receptor in complex with Gs and Pramlintide analogue peptide San45
分子名称: (2S)-2-{[(1R)-1-hydroxyhexadecyl]oxy}-3-{[(1R)-1-hydroxyoctadecyl]oxy}propyl 2-(trimethylammonio)ethyl phosphate, 2-acetamido-2-deoxy-beta-D-glucopyranose, CHOLESTEROL HEMISUCCINATE, ...
著者Cao, J, Sexton, P.M, Wootten, D.L, Belousoff, M.J.
登録日2022-11-03
公開日2023-08-02
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (2 Å)
主引用文献Structural insight into selectivity of amylin and calcitonin receptor agonists.
Nat.Chem.Biol., 20, 2024

225946

件を2024-10-09に公開中

PDB statisticsPDBj update infoContact PDBjnumon