Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
6Y36
DownloadVisualize
BU of 6y36 by Molmil
CCAAT-binding complex from Aspergillus fumigatus with cccA DNA
Descriptor: CCAAT-binding factor complex subunit HapC, CCAAT-binding factor complex subunit HapE, CCAAT-binding transcription factor subunit HAPB, ...
Authors:Groll, M, Huber, E.M.
Deposit date:2020-02-17
Release date:2020-05-27
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural basis of HapE P88L -linked antifungal triazole resistance in Aspergillus fumigatus .
Life Sci Alliance, 3, 2020
6Y37
DownloadVisualize
BU of 6y37 by Molmil
CCAAT-binding complex from Aspergillus nidulans with cccA DNA
Descriptor: CBFD_NFYB_HMF domain-containing protein, DNA (25-MER), GLYCEROL, ...
Authors:Groll, M, Huber, E.M.
Deposit date:2020-02-17
Release date:2020-05-27
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural basis of HapE P88L -linked antifungal triazole resistance in Aspergillus fumigatus .
Life Sci Alliance, 3, 2020
6Y35
DownloadVisualize
BU of 6y35 by Molmil
CCAAT-binding complex from Aspergillus fumigatus with cycA DNA
Descriptor: CCAAT-binding factor complex subunit HapC, CCAAT-binding factor complex subunit HapE, CCAAT-binding transcription factor subunit HAPB, ...
Authors:Groll, M, Huber, E.M.
Deposit date:2020-02-17
Release date:2020-05-27
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural basis of HapE P88L -linked antifungal triazole resistance in Aspergillus fumigatus .
Life Sci Alliance, 3, 2020
6Y39
DownloadVisualize
BU of 6y39 by Molmil
HapE-P88L mutant CCAAT-binding complex from Aspergillus nidulans with cycA DNA
Descriptor: CBFD_NFYB_HMF domain-containing protein, CHLORIDE ION, DNA (25 mer), ...
Authors:Groll, M, Huber, E.M.
Deposit date:2020-02-17
Release date:2020-05-27
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural basis of HapE P88L -linked antifungal triazole resistance in Aspergillus fumigatus .
Life Sci Alliance, 3, 2020
3GPJ
DownloadVisualize
BU of 3gpj by Molmil
Crystal structure of the yeast 20S proteasome in complex with syringolin B
Descriptor: N-{[(1S)-2-methyl-1-{[(5S,8S)-5-(1-methylethyl)-2,7-dioxo-1,6-diazacyclododec-3-en-8-yl]carbamoyl}propyl]carbamoyl}-L-valine, Proteasome component C1, Proteasome component C11, ...
Authors:Groll, M, Huber, R, Kaiser, M.
Deposit date:2009-03-23
Release date:2009-06-02
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Synthetic and structural studies on syringolin A and B reveal critical determinants of selectivity and potency of proteasome inhibition
Proc.Natl.Acad.Sci.USA, 106, 2009
3D29
DownloadVisualize
BU of 3d29 by Molmil
Proteasome Inhibition by Fellutamide B
Descriptor: (3R)-3-HYDROXYDODECANOIC ACID, Fellutamide B, PRE10 isoform 1, ...
Authors:Groll, M, Hines, J, Fahnestock, M, Crews, M.C.
Deposit date:2008-05-07
Release date:2008-06-10
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Proteasome Inhibition by Fellutamide B Induces Nerve Growth Factor Synthesis
Chem.Biol., 15, 2008
3OKJ
DownloadVisualize
BU of 3okj by Molmil
Alpha-keto-aldehyde binding mechanism reveals a novel lead structure motif for proteasome inhibition
Descriptor: N-[(benzyloxy)carbonyl]-L-leucyl-N-[(2S,3S)-3-hydroxy-1-(4-hydroxyphenyl)-4-oxobutan-2-yl]-L-leucinamide, Proteasome component C1, Proteasome component C11, ...
Authors:Groll, M, Poynor, M, Gallastegui, P, Stein, M, Schmidt, B, Kloetzel, P.M, Huber, R.
Deposit date:2010-08-25
Release date:2011-06-08
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Elucidation of the alpha-keto-aldehyde binding mechanism: a lead structure motif for proteasome inhibition
Angew.Chem.Int.Ed.Engl., 50, 2011
5DAQ
DownloadVisualize
BU of 5daq by Molmil
Fe(II)/(alpha)ketoglutarate-dependent dioxygenase AsqJ in complex with 4-Methoxycyclopeptin
Descriptor: (3S)-3-(4-methoxybenzyl)-4-methyl-3,4-dihydro-1H-1,4-benzodiazepine-2,5-dione, 2-OXOGLUTARIC ACID, NICKEL (II) ION, ...
Authors:Groll, M, Braeuer, A.
Deposit date:2015-08-20
Release date:2015-11-25
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure of the Dioxygenase AsqJ: Mechanistic Insights into a One-Pot Multistep Quinolone Antibiotic Biosynthesis.
Angew.Chem.Int.Ed.Engl., 55, 2016
5DAX
DownloadVisualize
BU of 5dax by Molmil
Fe(II)/(alpha)ketoglutarate-dependent dioxygenase AsqJ in complex with demethylated cyclopeptin
Descriptor: 2-OXOGLUTARIC ACID, NICKEL (II) ION, Phytanoyl-CoA dioxygenase family protein (AFU_orthologue AFUA_8G00230), ...
Authors:Groll, M, Braeuer, A.
Deposit date:2015-08-20
Release date:2015-11-25
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure of the Dioxygenase AsqJ: Mechanistic Insights into a One-Pot Multistep Quinolone Antibiotic Biosynthesis.
Angew.Chem.Int.Ed.Engl., 55, 2016
3NOY
DownloadVisualize
BU of 3noy by Molmil
Crystal structure of IspG (gcpE)
Descriptor: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, IRON/SULFUR CLUSTER
Authors:Groll, M, Graewert, T, Bacher, A.
Deposit date:2010-06-26
Release date:2010-11-17
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Biosynthesis of isoprenoids: crystal structure of the [4Fe-4S] cluster protein IspG.
J.Mol.Biol., 404, 2010
5DAP
DownloadVisualize
BU of 5dap by Molmil
Fe(II)/(alpha)ketoglutarate-dependent dioxygenase AsqJ
Descriptor: 2-OXOGLUTARIC ACID, NICKEL (II) ION, Phytanoyl-CoA dioxygenase family protein (AFU_orthologue AFUA_8G00230)
Authors:Groll, M, Braeuer, A.
Deposit date:2015-08-20
Release date:2015-11-25
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure of the Dioxygenase AsqJ: Mechanistic Insights into a One-Pot Multistep Quinolone Antibiotic Biosynthesis.
Angew.Chem.Int.Ed.Engl., 55, 2016
5DAW
DownloadVisualize
BU of 5daw by Molmil
Fe(II)/(alpha)ketoglutarate-dependent dioxygenase AsqJ in complex with cyclopeptin
Descriptor: 2-OXOGLUTARIC ACID, NICKEL (II) ION, Phytanoyl-CoA dioxygenase family protein (AFU_orthologue AFUA_8G00230), ...
Authors:Groll, M, Braeuer, A.
Deposit date:2015-08-20
Release date:2015-11-25
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure of the Dioxygenase AsqJ: Mechanistic Insights into a One-Pot Multistep Quinolone Antibiotic Biosynthesis.
Angew.Chem.Int.Ed.Engl., 55, 2016
3KEF
DownloadVisualize
BU of 3kef by Molmil
Crystal structure of IspH:DMAPP-complex
Descriptor: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, DIMETHYLALLYL DIPHOSPHATE, FE3-S4 CLUSTER
Authors:Groll, M, Graewert, T, Span, I, Eisenreich, W, Bacher, A.
Deposit date:2009-10-26
Release date:2010-01-12
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Probing the reaction mechanism of IspH protein by x-ray structure analysis.
Proc.Natl.Acad.Sci.USA, 107, 2010
3KEM
DownloadVisualize
BU of 3kem by Molmil
Crystal structure of IspH:IPP complex
Descriptor: 3-METHYLBUT-3-ENYL TRIHYDROGEN DIPHOSPHATE, 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, FE3-S4 CLUSTER
Authors:Groll, M, Graewert, T, Span, I, Eisenreich, W, Bacher, A.
Deposit date:2009-10-26
Release date:2010-01-12
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Probing the reaction mechanism of IspH protein by x-ray structure analysis.
Proc.Natl.Acad.Sci.USA, 107, 2010
3KE9
DownloadVisualize
BU of 3ke9 by Molmil
Crystal structure of IspH:Intermediate-complex
Descriptor: 3-METHYLBUT-3-ENYL TRIHYDROGEN DIPHOSPHATE, 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, IRON/SULFUR CLUSTER
Authors:Groll, M, Graewert, T, Span, I, Eisenreich, W, Bacher, A.
Deposit date:2009-10-24
Release date:2010-01-12
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Probing the reaction mechanism of IspH protein by x-ray structure analysis.
Proc.Natl.Acad.Sci.USA, 107, 2010
3KEL
DownloadVisualize
BU of 3kel by Molmil
Crystal Structure of IspH:PP complex
Descriptor: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, FE3-S4 CLUSTER, PYROPHOSPHATE 2-
Authors:Groll, M, Graewert, T, Span, I, Eisenreich, W, Bacher, A.
Deposit date:2009-10-26
Release date:2010-01-12
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Probing the reaction mechanism of IspH protein by x-ray structure analysis.
Proc.Natl.Acad.Sci.USA, 107, 2010
3KE8
DownloadVisualize
BU of 3ke8 by Molmil
Crystal structure of IspH:HMBPP-complex
Descriptor: 4-HYDROXY-3-METHYL BUTYL DIPHOSPHATE, 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, IRON/SULFUR CLUSTER
Authors:Groll, M, Graewert, T, Span, I, Eisenreich, W, Bacher, A.
Deposit date:2009-10-24
Release date:2010-01-12
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Probing the reaction mechanism of IspH protein by x-ray structure analysis.
Proc.Natl.Acad.Sci.USA, 107, 2010
3MHP
DownloadVisualize
BU of 3mhp by Molmil
FNR-recruitment to the thylakoid
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Ferredoxin--NADP reductase, leaf isozyme, ...
Authors:Groll, M, Alte, F, Soll, J, Boelter, B.
Deposit date:2010-04-08
Release date:2010-10-27
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Ferredoxin:NADPH oxidoreductase is recruited to thylakoids by binding to a polyproline type II helix in a pH-dependent manner.
Proc.Natl.Acad.Sci.USA, 107, 2010
4GK7
DownloadVisualize
BU of 4gk7 by Molmil
yeast 20S proteasome in complex with the Syringolin-Glidobactin chimera
Descriptor: Proteasome component C1, Proteasome component C11, Proteasome component C5, ...
Authors:Groll, M, Stein, M.L, Bachmann, A.
Deposit date:2012-08-10
Release date:2012-08-29
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Activity enhancement of the synthetic syrbactin proteasome inhibitor hybrid and biological evaluation in tumor cells.
Biochemistry, 51, 2012
4Z1L
DownloadVisualize
BU of 4z1l by Molmil
Yeast 20S proteasome in complex with belactosin C derivative 3
Descriptor: (2S,3S)-2-{(1R)-2-[(3,5-dimethoxybenzyl)amino]-1-hydroxy-2-oxoethyl}-3-methylpentanoic acid, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Huber, E.M, Groll, M.
Deposit date:2015-03-27
Release date:2015-05-27
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (3 Å)
Cite:A Minimal beta-Lactone Fragment for Selective beta 5c or beta 5i Proteasome Inhibitors.
Angew.Chem.Int.Ed.Engl., 54, 2015
5BYI
DownloadVisualize
BU of 5byi by Molmil
Human carbonic anhydrase II with an azobenzene inhibitor (1d)
Descriptor: 4-(HYDROXYMERCURY)BENZOIC ACID, 4-[(E)-(4-aminophenyl)diazenyl]benzenesulfonamide, Carbonic anhydrase 2, ...
Authors:Groll, M, Broichhagen, J.
Deposit date:2015-06-10
Release date:2015-08-05
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Azobenzene-based inhibitors of human carbonic anhydrase II.
Beilstein J Org Chem, 11, 2015
6G7F
DownloadVisualize
BU of 6g7f by Molmil
Yeast 20S proteasome in complex with Cystargolide B
Descriptor: CHLORIDE ION, Cystargolide B- bound form, MAGNESIUM ION, ...
Authors:Groll, M, Tello-Aburto, R.
Deposit date:2018-04-05
Release date:2018-09-12
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Design, synthesis, and evaluation of cystargolide-based beta-lactones as potent proteasome inhibitors.
Eur J Med Chem, 157, 2018
6G8M
DownloadVisualize
BU of 6g8m by Molmil
Yeast 20S proteasome in complex with Cystargolide B Derivative 1
Descriptor: (2~{S},3~{R})-4-[[(2~{S})-3-methyl-1-[[(2~{S})-3-methyl-1-oxidanylidene-1-phenylmethoxy-butan-2-yl]amino]-1-oxidanylidene-butan-2-yl]amino]-3-oxidanyl-4-oxidanylidene-2-propan-2-yl-butanoic acid, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Groll, M, Tello-Aburto, R.
Deposit date:2018-04-09
Release date:2018-09-12
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Design, synthesis, and evaluation of cystargolide-based beta-lactones as potent proteasome inhibitors.
Eur J Med Chem, 157, 2018
6G8N
DownloadVisualize
BU of 6g8n by Molmil
Yeast 20S proteasome in complex with Cystargolide B Derivative 2
Descriptor: (2~{S},3~{S})-3-methyl-2-[(1~{R})-2-[[(2~{S})-3-methyl-1-[[(2~{S})-3-methyl-1-oxidanylidene-1-phenylmethoxy-butan-2-yl] amino]-1-oxidanylidene-butan-2-yl]amino]-1-oxidanyl-2-oxidanylidene-ethyl]pentanoic acid, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Groll, M, Tello-Aburto, R.
Deposit date:2018-04-09
Release date:2018-09-12
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3 Å)
Cite:Design, synthesis, and evaluation of cystargolide-based beta-lactones as potent proteasome inhibitors.
Eur J Med Chem, 157, 2018
6H39
DownloadVisualize
BU of 6h39 by Molmil
Yeast 20S proteasome in complex with the peptidic non-covalent binding inhibitor RTS-V5
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Groll, M, Hansen, F.K.
Deposit date:2018-07-17
Release date:2018-11-07
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Discovery of the First-in-Class Dual Histone Deacetylase-Proteasome Inhibitor.
J. Med. Chem., 61, 2018

238582

PDB entries from 2025-07-09

PDB statisticsPDBj update infoContact PDBjnumon