[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 13,806 items for (author: yan & k)

EMDB-72136:
NediV IRES (A site) in complex with Rabbit 80S ribosome
Method: single particle / : De S, Altomare CG, Abaeva IS, Dadhwal P, Garg P, Acosta-Reyes F, Brown ZP, Pestova TV, Hellen CUT, Frank J

EMDB-72137:
NediV IRES (P site) in complex with Rabbit 80S ribosome
Method: single particle / : De S, Altomare CG, Abaeva IS, Dadhwal P, Garg P, Acosta-Reyes F, Brown ZP, Pestova TV, Hellen CUT, Frank J

EMDB-72168:
Rabbit ribosomal 80S elongation complex with eEF2, partial P site Ala-tRNA, E site Ala-tRNA on NediV ORF
Method: single particle / : De S, Altomare CG, Abaeva IS, Dadhwal P, Garg P, Acosta-Reyes F, Brown ZP, Pestova TV, Hellen CUT, Frank J

EMDB-72171:
Rabbit ribosomal 80S elongation complex with eEF1A, A*/T Ala-tRNA, P site Ala-tRNA, E site Ala-tRNA on NediV ORF
Method: single particle / : De S, Altomare CG, Abaeva IS, Dadhwal P, Garg P, Acosta-Reyes F, Brown ZP, Pestova TV, Hellen CUT, Frank J

EMDB-72175:
NediV IRES in complex with Rabbit 80S ribosome with eEF2 and P site Ala-tRNA
Method: single particle / : De S, Altomare CG, Abaeva IS, Dadhwal P, Garg P, Acosta-Reyes F, Brown ZP, Pestova TV, Hellen CUT, Frank J

PDB-9q1q:
NediV IRES (A site) in complex with Rabbit 80S ribosome
Method: single particle / : De S, Altomare CG, Abaeva IS, Dadhwal P, Garg P, Acosta-Reyes F, Brown ZP, Pestova TV, Hellen CUT, Frank J

PDB-9q1s:
NediV IRES (P site) in complex with Rabbit 80S ribosome
Method: single particle / : De S, Altomare CG, Abaeva IS, Dadhwal P, Garg P, Acosta-Reyes F, Brown ZP, Pestova TV, Hellen CUT, Frank J

PDB-9q2m:
Rabbit ribosomal 80S elongation complex with eEF2, partial P site Ala-tRNA, E site Ala-tRNA on NediV ORF
Method: single particle / : De S, Altomare CG, Abaeva IS, Dadhwal P, Garg P, Acosta-Reyes F, Brown ZP, Pestova TV, Hellen CUT, Frank J

PDB-9q2p:
Rabbit ribosomal 80S elongation complex with eEF1A, A*/T Ala-tRNA, P site Ala-tRNA, E site Ala-tRNA on NediV ORF
Method: single particle / : De S, Altomare CG, Abaeva IS, Dadhwal P, Garg P, Acosta-Reyes F, Brown ZP, Pestova TV, Hellen CUT, Frank J

PDB-9q2t:
NediV IRES in complex with Rabbit 80S ribosome with eEF2 and P site Ala-tRNA
Method: single particle / : De S, Altomare CG, Abaeva IS, Dadhwal P, Garg P, Acosta-Reyes F, Brown ZP, Pestova TV, Hellen CUT, Frank J

EMDB-75431:
The cryoEM structure of T10 type2 nanofiber
Method: helical / : Zhang H, Yang Y

EMDB-75434:
The CryoEM structure of T12 type1 nanofiber
Method: helical / : Zhang H, Yang Y

EMDB-75435:
The CryoEM structure of T12 type2 nanofiber
Method: helical / : Zhang H, Yang Y

PDB-10sd:
The cryoEM structure of T10 type2 nanofiber
Method: helical / : Zhang H, Yang Y

PDB-10sg:
The CryoEM structure of T12 type1 nanofiber
Method: helical / : Zhang H, Yang Y

PDB-10sh:
The CryoEM structure of T12 type2 nanofiber
Method: helical / : Zhang H, Yang Y

EMDB-71908:
QS 70S ribosome purified from FN200 cells
Method: single particle / : Ortega J, Arpin D

EMDB-65681:
Structure of the averaged natural silk fibroin nanofibril
Method: subtomogram averaging / : Haonan Z, Kai S, Yan L, Ping Z

EMDB-65682:
Averaged map of fibroin in silkworm silk
Method: subtomogram averaging / : Haonan Z, Kai S, Yan L, Ping Z

EMDB-65705:
Tomogram of fibroin and sericin in silkworm silk
Method: electron tomography / : Haonan Z, Kai S, Yan L, Ping Z

EMDB-65706:
Tomogram of fibroin in silkworm silk
Method: electron tomography / : Kai S, Haonan Z, Yan L, Ping Z

EMDB-65708:
Tomogram of natural silk fibroin extracted from posterior silk glands
Method: electron tomography / : Kai S, Haonan Z, Yan L, Ping Z

EMDB-72170:
NediV IRES in complex with Rabbit 80S ribosome with A site Ala-tRNA
Method: single particle / : De S, Altomare CG, Abaeva IS, Dadhwal P, Garg P, Acosta-Reyes F, Brown ZP, Pestova TV, Hellen CUT, Frank J

PDB-9q2o:
NediV IRES in complex with Rabbit 80S ribosome with A site Ala-tRNA
Method: single particle / : De S, Altomare CG, Abaeva IS, Dadhwal P, Garg P, Acosta-Reyes F, Brown ZP, Pestova TV, Hellen CUT, Frank J

EMDB-71994:
Cryo-EM structure of NapA, the periplasmic nitrate reductase from Campylobacter jejuni
Method: single particle / : Thach T, Subramanian R

PDB-9pxt:
Cryo-EM structure of NapA, the periplasmic nitrate reductase from Campylobacter jejuni
Method: single particle / : Thach T, Subramanian R

EMDB-77146:
Focused refinement of turnover filament interface of glutamine synthetase
Method: single particle / : Greene ER, Muniz RS, Kollman JM, Fraser JS

EMDB-65483:
In situ Tspan-7 spiral structure in retraction fiber
Method: helical / : Jia X, Wang DJ, Li XP, Liu N, Yu L, Wang HW

EMDB-66073:
PSI complex of A.thaliana isolated using DOC based Clear-Native-PAGE method
Method: single particle / : Kawamoto A, Seki S, Kurisu G

EMDB-65952:
Cryo-EM structure of I3L-ssDNA double-ring complex
Method: single particle / : Ma J, Yang K

PDB-9wgb:
Cryo-EM structure of I3L-ssDNA double-ring complex
Method: single particle / : Ma J, Yang K

EMDB-66467:
Cryo-EM structure of Borna disease virus RNA polymerase complex
Method: single particle / : Ma J, Yang K, Wu H, Liang Z

EMDB-66473:
Cryo-EM structure of Borna disease virus RNA polymerase L protein
Method: single particle / : Ma J, Yang K, Wu H, Liang Z

EMDB-66595:
Cryo-EM structure of Borna disease virus RNA-directed RNA polymerase in complex with Suramin
Method: single particle / : Ma J, Yang K, Wu H, Liang Z, Zou J

PDB-9x1v:
Cryo-EM structure of Borna disease virus RNA polymerase complex
Method: single particle / : Ma J, Yang K, Wu H, Liang Z

PDB-9x28:
Cryo-EM structure of Borna disease virus RNA polymerase L protein
Method: single particle / : Ma J, Yang K, Wu H, Liang Z

PDB-9x5r:
Cryo-EM structure of Borna disease virus RNA-directed RNA polymerase in complex with Suramin
Method: single particle / : Ma J, Yang K, Wu H, Liang Z, Zou J

EMDB-66192:
Cyro-EM structure of the ACT-451840-bound PfMDR1
Method: single particle / : Zhao Z, Li J, Wang X, Liu X, Wang N, Xu H, Quan C, Kato N, Deng D, Jing X

PDB-9ws4:
Cyro-EM structure of the ACT-451840-bound PfMDR1
Method: single particle / : Zhao Z, Li J, Wang X, Liu X, Wang N, Xu H, Quan C, Wang X, Kato N, Deng D, Jing X

EMDB-72972:
AM12-340 Fab in complex with HIV-1 Env 5MUT-3fill SOSIP
Method: single particle / : Gristick HB, Gavor E, Bjorkman PJ

PDB-9yhs:
AM12-340 Fab in complex with HIV-1 Env 5MUT-3fill SOSIP
Method: single particle / : Gristick HB, Gavor E, Bjorkman PJ

EMDB-65233:
Composite map of Type II-A CRISPR integrase prespacer catching complex, State II
Method: single particle / : Li ZX, Xiao YB

EMDB-73343:
Cryo-EM structure of the VPS13C N-terminal region in complex with Calmodulin
Method: single particle / : Li D, Reinisch KM

EMDB-73344:
Cryo-EM structure of the VPS13C C-terminal region
Method: single particle / : Li D, Reinisch KM

EMDB-73373:
Full-length human VPS13C in complex with calmodulin from the CryoEM composite map
Method: single particle / : Li D, Reinisch KM

PDB-9yqp:
Cryo-EM structure of the VPS13C N-terminal region in complex with Calmodulin
Method: single particle / : Li D, Reinisch KM

PDB-9yqq:
Cryo-EM structure of the VPS13C C-terminal region
Method: single particle / : Li D, Reinisch KM

PDB-9yrm:
CryoEM Structure of VPS13 protein, 1-1390 from C. thermophilum, in complex with calmodulin
Method: single particle / : Li D, Reinisch KM

PDB-9yrp:
Full-length human VPS13C in complex with calmodulin from the CryoEM composite map
Method: single particle / : Li D, Reinisch KM

EMDB-54774:
Cryo-EM structure of the Arabidopsis thaliana 60S ribosomal subunit
Method: single particle / : Karki S, Lu X, Paatero AO, Ruonala R, Tranter D, Guryanov S, Rehan S, Hellmann E, Haakonsson A, Butcher SJ, Huiskonen JT, Kajander T, Helariutta Y, Paavilainen VO

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more