[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 6,416 items for (author: xu & b)

EMDB-65801:
Cryo-EM structure of SARS-CoV-2 WT 6p spike protein in complex with P5-1C8 IgG (1.5 IgG)
Method: single particle / : Lv NN, Yang RY

EMDB-65802:
Cryo-EM structure of SARS-CoV-2 WT 6p spike protein in complex with P5-1C8 IgG (1 IgG)
Method: single particle / : Lv NN, Yang RY

EMDB-65803:
Immune complex of P5-1C8 Fab binding the RBD of Omicron JN.1 6p spike protein
Method: single particle / : Lv NN, Yang RY

EMDB-65804:
Immune complex of P5-1C8 Fab binding the RBD of Omicron BA.1 6p spike protein (2 Fab)
Method: single particle / : Lv NN, Yang RY

EMDB-65805:
Immune complex of P5-1C8 Fab binding the RBD of Omicron BA.1 6p spike protein (1 Fab)
Method: single particle / : Lv NN, Yang RY

EMDB-65806:
Immune complex of P5-1C8 IgG binding the RBD of Omicron BA.1 6p spike protein
Method: single particle / : Lv NN, Yang RY

EMDB-65807:
Immune complex of P5-1C8 Fab binding the RBD of SARS-CoV-2 WT 6p spike protein
Method: single particle / : Lv NN, Yang RY

EMDB-65808:
Immune complex of P5-1C8 IgG binding the RBD of SARS-CoV-2 WT 6p spike protein
Method: single particle / : Lv NN, Yang RY

EMDB-65211:
Cryo-EM structure of hnRAC1-2,8beta fibril polymorph2
Method: helical / : Li YS, Li DN, Dai B

EMDB-65213:
Cryo-EM structure of hnRAC1-2,8beta fibril polymorph1
Method: helical / : Li YS, Li DN, Dai B

EMDB-65214:
Cryo-EM structure of hnRAC1-2,8homobeta fibril
Method: helical / : Li YS, Li DN, Dai B

PDB-9vnk:
Cryo-EM structure of hnRAC1-2,8beta fibril polymorph2
Method: helical / : Li YS, Li DN, Dai B

PDB-9vnm:
Cryo-EM structure of hnRAC1-2,8beta fibril polymorph1
Method: helical / : Li YS, Li DN, Dai B

PDB-9vnn:
Cryo-EM structure of hnRAC1-2,8homobeta fibril
Method: helical / : Li YS, Li DN, Dai B

EMDB-62694:
structure of MCT2-embigin complex
Method: single particle / : Xu B, Wang Y

EMDB-62696:
structure of MCT2-embigin-AR-C155858 complex
Method: single particle / : Xu B, Wang Y

PDB-9l0b:
structure of MCT2-embigin complex
Method: single particle / : Xu B, Wang Y

PDB-9l0c:
structure of MCT2-embigin-AR-C155858 complex
Method: single particle / : Xu B, Wang Y

EMDB-63119:
The cryo-EM structure of the native PMEL fibril lamella
Method: single particle / : Ma BY, Yao YX, Dong H, Li D, Liu C

PDB-9lip:
The cryo-EM structure of the native PMEL fibril lamella
Method: single particle / : Ma BY, Yao YX, Dong H, Li D, Liu C

EMDB-70814:
Helical assembly of the IL-17RA/RB/ACT1 complex consensus map
Method: single particle / : Zhang H, Bai X, Zhang X

EMDB-70816:
Helical assembly of the IL-17RA/RB/ACT1 complex lower part focused map
Method: single particle / : Zhang H, Bai X, Zhang X

EMDB-70817:
Helical reconstruction of the IL-17RA/RB/ACT1 complex
Method: helical / : Zhang H, Bai X, Zhang X

EMDB-70818:
Helical assembly of the IL-17RA/RB/ACT1 complex
Method: single particle / : Zhang H, Bai X, Zhang X

PDB-9ot1:
Helical assembly of the IL-17RA/RB/ACT1 complex
Method: single particle / : Zhang H, Bai X, Zhang X

EMDB-63181:
Cryo-EM map of C1ql1-gC1q hexamer and BAI3-eCUB complex
Method: single particle / : Liao L, Niu F, Wei Z

EMDB-63182:
Focused map of C1ql1-gC1q trimer and BAI3-eCUB complex
Method: single particle / : Liao L, Niu F, Wei Z

PDB-9lkl:
Cryo-EM map of C1ql1-gC1q hexamer and BAI3-eCUB complex
Method: single particle / : Liao L, Niu F, Wei Z

PDB-9lkm:
Focused map of C1ql1-gC1q trimer and BAI3-eCUB complex
Method: single particle / : Liao L, Niu F, Wei Z

EMDB-66326:
Tomogram of doublet microtubules with bound dynein-2 molecules
Method: electron tomography / : He HK, Chen X, Lv QH, Ichikawa M

EMDB-61501:
Cryo-EM Structure of the apo HCAR3-Gi complex
Method: single particle / : Fang Y

EMDB-61502:
Cryo-EM Structure of the niacin-HCAR3-Gi complex
Method: single particle / : Fang Y

PDB-9jic:
Cryo-EM Structure of the apo HCAR3-Gi complex
Method: single particle / : Fang Y, Fang Y

PDB-9jid:
Cryo-EM Structure of the niacin-HCAR3-Gi complex
Method: single particle / : Fang Y, Fang Y

EMDB-54480:
Tomogram of unbudded yeast cell overexpressing Ldm1
Method: electron tomography / : Keller J, Diep DTV, Zhao XT, Bohnert M, Fernandez-Busnadiego R

EMDB-54483:
Tomogram of yeast cell overexpressing Ldm1, treated with alpha-factor
Method: electron tomography / : Keller J, Diep DTV, Zhao XT, Bohnert M, Fernandez-Busnadiego R

EMDB-63948:
Cryo-EM structure of conivaptan-bound human vasopressin V2 receptor complex with Fab
Method: single particle / : Jiang Y, You CZ, Zhang TW, Xu YW, Tan YX

EMDB-63949:
Cryo-EM structure of tolvaptan-bound human vasopressin V2 receptor complex with Fab
Method: single particle / : Jiang Y, You CZ, Zhang TW, Xu YW, Tan YX

PDB-9u80:
Cryo-EM structure of conivaptan-bound human vasopressin V2 receptor complex with Fab
Method: single particle / : Jiang Y, You CZ, Zhang TW, Xu YW, Tan YX

PDB-9u81:
Cryo-EM structure of tolvaptan-bound human vasopressin V2 receptor complex with Fab
Method: single particle / : Jiang Y, You CZ, Zhang TW, Xu YW, Tan YX

EMDB-63104:
Cryo-EM structure of GPR155 monomer in complex with cholesterol
Method: single particle / : Gao F, Zhang X, Li D, Pu H

EMDB-63106:
Cryo-EM structure of GPR155 contracted dimer in complex with cholesterol
Method: single particle / : Gao F, Zhang X, Li D, Han P

EMDB-63107:
Cryo-EM map of GPR155 extended dimer
Method: single particle / : Gao F, Zhang X, Li D, Han P

PDB-9lhq:
Cryo-EM structure of GPR155 monomer in complex with cholesterol
Method: single particle / : Gao F, Zhang X, Li D, Pu H

PDB-9lhv:
Cryo-EM structure of GPR155 contracted dimer in complex with cholesterol
Method: single particle / : Gao F, Zhang X, Li D, Han P

PDB-9lhx:
Rigid fitting model of GPR155 extended dimer
Method: single particle / : Gao F, Zhang X, Li D, Han P

EMDB-62848:
Structure of Ro60 dimer from Thermus phage phiLo
Method: single particle / : Hu Z, Huang Y

PDB-9l5y:
Structure of Ro60 dimer from Thermus phage phiLo
Method: single particle / : Hu Z, Huang Y

EMDB-62756:
3-phenylpropionate bound dioxygenase HcaE-HcaF
Method: single particle / : Jiang WX, Wu M, Cheng XQ, Ma LX, Xing Q

PDB-9l1w:
3-phenylpropionate bound dioxygenase HcaE-HcaF
Method: single particle / : Jiang WX, Wu M, Cheng XQ, Ma LX, Xing Q

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more